RNA–Protein interactions for RNA: ENST00000552008.5

LIMA1-209, Transcript of LIM domain and actin binding 1, humanhuman

TSL 5

Gene LIMA1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-209ENST00000552008 RTL8AQ9BWD3 113 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 CDCA4Q9BXL8 241 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ZNF436Q9C0F3 470 aaPredicted RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 METTL8Q9H825 291 aaKnown RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 DYNLRB1Q9NP97 96 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ASCL3Q9NQ33 180 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 CMC2Q9NRP2 79 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 RASL12Q9NYN1 266 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ABRACLQ9P1F3 81 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ATPIF1Q9UII2 106 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ENPP5Q9UJA9 477 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 GNG8Q9UK08 70 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 HHLA2Q9UM44 414 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 PCYT1BQ9Y5K3 369 aaPredicted RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 MPC1Q9Y5U8 109 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 CHCHD2Q9Y6H1 151 aaPredicted RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 A0A0A6YYH2 397 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 TRAV8-2A0A0B4J237 113 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 A0A1W2PNN7 141 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 C5orf49A4QMS7 147 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 A6NED7 52 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 A6NJ64 397 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 TMEM210A6NLX4 147 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 ZNF729A6NN14 1252 aaPredicted RBP1.14□□□□□ -2.23
LIMA1-209ENST00000552008 FAM25EA8MYX2 175 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 MCRIP1C9JLW8 97 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 F5H5K5 113 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 RNASEK-C17orf49H0YIS7 233 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 TRAPPC2LH3BP13 241 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 BOLA2-SMG1P6H3BVE0 249 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 J3QKU1 62 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 SULT1C2O00338 296 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 ISLRO14498 428 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 BHLHE40O14503 412 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 CRXO43186 299 aaPredicted RBP1.14□□□□□ -2.23
LIMA1-209ENST00000552008 SULT1B1O43704 296 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 CREBL2O60519 120 aaPredicted RBP1.14□□□□□ -2.23
LIMA1-209ENST00000552008 SOX14O95416 240 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 CST4P01036 141 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 IGHV3-53P01767 116 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 HLA-AP01891 365 aaKnown RBP1.14□□□□□ -2.23
LIMA1-209ENST00000552008 ISG15P05161 165 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 UCHL1P09936 223 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 CTXN2P0C2S0 81 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 ASAH2BP0C7U1 165 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 INAFM2P0DMQ5 153 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 CCL3P10147 92 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 HRES1P13985 223 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 HIST1H1CP16403 213 aaKnown RBP1.14□□□□□ -2.23
LIMA1-209ENST00000552008 CD36P16671 472 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 SPI1P17947 270 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 GZMHP20718 246 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 RPS4Y1P22090 263 aaKnown RBP1.14□□□□□ -2.23
LIMA1-209ENST00000552008 ZNF93P35789 620 aaPredicted RBP1.14□□□□□ -2.23
LIMA1-209ENST00000552008 UGT2B10P36537 528 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 CD79BP40259 229 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 CA7P43166 264 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 LGALS7P47929 136 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 RBP2P50120 134 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 GZMMP51124 257 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 DAPP51397 102 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 TMEM33P57088 247 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 ACTBP60709 375 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 LCN6P62502 163 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 ACTG1P63261 375 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 HOXC5Q00444 222 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 RPL18Q07020 188 aaKnown RBP1.14□□□□□ -2.23
LIMA1-209ENST00000552008 FOXF1Q12946 379 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 MLLT11Q13015 90 aaPredicted RBP1.14□□□□□ -2.23
LIMA1-209ENST00000552008 TPBGQ13641 420 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 RSU1Q15404 277 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 OR8G1Q15617 311 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 NEDD8Q15843 81 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 LINC00303Q3SY05 128 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 ACSM3Q53FZ2 586 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 CLVS2Q5SYC1 327 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 C10orf128Q5T292 105 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 HACD4Q5VWC8 232 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 TRIQKQ629K1 86 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 LAMTOR1Q6IAA8 161 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 CLEC18BQ6UXF7 455 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 DGAT2L6Q6ZPD8 337 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 Q6ZQT7 251 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 SLC36A1Q7Z2H8 476 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 DCXRQ7Z4W1 244 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 LYZL2Q7Z4W2 148 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 DOLPP1Q86YN1 238 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 C20orf196Q8IYI0 205 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 ZFP82Q8N141 532 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 LRRC18Q8N456 261 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 SLC22A24Q8N4F4 322 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 SPICQ8N5J4 248 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 EIF4E3Q8N5X7 224 aaKnown RBP1.14□□□□□ -2.23
LIMA1-209ENST00000552008 FER1L6-AS1Q8NA97 138 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 GATD1Q8NB37 220 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 SLC30A7Q8NEW0 376 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 OR5A2Q8NGI9 324 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 OR51A2Q8NGJ7 313 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 OR2AE1Q8NHA4 323 aa1.14□□□□□ -2.23
LIMA1-209ENST00000552008 PFN4Q8NHR9 129 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms