RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 C12orf74Q32Q52 190 aa10.23□□□□□ -0.77
CHMP1A-210ENST00000551981 LGALS9BQ3B8N2 356 aa10.23□□□□□ -0.77
CHMP1A-210ENST00000551981 SPARTQ8N0X7 666 aa10.23□□□□□ -0.77
CHMP1A-210ENST00000551981 ANAPC10Q9UM13 185 aa10.23□□□□□ -0.77
CHMP1A-210ENST00000551981 CELA1Q9UNI1 258 aa10.23□□□□□ -0.77
CHMP1A-210ENST00000551981 ANKRD65E5RJM6 399 aa10.22□□□□□ -0.77
CHMP1A-210ENST00000551981 CORTO00230 105 aa10.22□□□□□ -0.77
CHMP1A-210ENST00000551981 P2RY1P47900 373 aa10.22□□□□□ -0.77
CHMP1A-210ENST00000551981 SUB1P53999 127 aaKnown RBP eCLIP10.22□□□□□ -0.77
CHMP1A-210ENST00000551981 NUTF2P61970 127 aaKnown RBP10.22□□□□□ -0.77
CHMP1A-210ENST00000551981 ZNF767PQ75MW2 155 aa10.22□□□□□ -0.77
CHMP1A-210ENST00000551981 TBC1D26Q86UD7 250 aa10.22□□□□□ -0.77
CHMP1A-210ENST00000551981 CSNK1G2-AS1Q8NCQ2 148 aa10.22□□□□□ -0.77
CHMP1A-210ENST00000551981 MRGPRFQ96AM1 343 aa10.22□□□□□ -0.77
CHMP1A-210ENST00000551981 C1QTNF4Q9BXJ3 329 aa10.22□□□□□ -0.77
CHMP1A-210ENST00000551981 HELTA6NFD8 242 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 IFNA10P01566 189 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 IFNA21P01568 189 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 IFNA17P01571 189 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 NAT1P18440 290 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 CRYBB3P26998 211 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 HRH1P35367 487 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 TSPAN5P62079 268 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 DHRS2Q13268 280 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 SPINK9Q5DT21 86 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 SOHLH1Q5JUK2 328 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 UBE2NLQ5JXB2 153 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 TMEM69Q5SWH9 247 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 UBE2DNLQ8IWF7 75 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 SLC35G3Q8N808 338 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 DCANP1Q8TF63 244 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 TMEM230Q96A57 120 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 RNF167Q9H6Y7 350 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 RAB26Q9ULW5 256 aa10.21□□□□□ -0.77
CHMP1A-210ENST00000551981 CLN5O75503 358 aa10.2□□□□□ -0.78
CHMP1A-210ENST00000551981 IGKV1-39P01597 117 aa10.2□□□□□ -0.78
CHMP1A-210ENST00000551981 IGKV1D-39P04432 117 aa10.2□□□□□ -0.78
CHMP1A-210ENST00000551981 PPP5CP53041 499 aa10.2□□□□□ -0.78
CHMP1A-210ENST00000551981 TAS2R20P59543 309 aa10.2□□□□□ -0.78
CHMP1A-210ENST00000551981 PSMG4Q5JS54 123 aa10.2□□□□□ -0.78
CHMP1A-210ENST00000551981 CROCCP3Q8IVE0 287 aa10.2□□□□□ -0.78
CHMP1A-210ENST00000551981 RAB40CQ96S21 281 aa10.2□□□□□ -0.78
CHMP1A-210ENST00000551981 PDCD10Q9BUL8 212 aa10.2□□□□□ -0.78
CHMP1A-210ENST00000551981 INS-IGF2F8WCM5 200 aa10.19□□□□□ -0.78
CHMP1A-210ENST00000551981 HLA-DMAP28067 261 aa10.19□□□□□ -0.78
CHMP1A-210ENST00000551981 PRSS3P35030 304 aa10.19□□□□□ -0.78
CHMP1A-210ENST00000551981 OPRK1P41145 380 aa10.19□□□□□ -0.78
CHMP1A-210ENST00000551981 AP2S1P53680 142 aaPredicted RBP10.19□□□□□ -0.78
CHMP1A-210ENST00000551981 ENY2Q9NPA8 101 aa10.19□□□□□ -0.78
CHMP1A-210ENST00000551981 TRAV30A0A087WSZ9 112 aa10.18□□□□□ -0.78
CHMP1A-210ENST00000551981 ATG12O94817 140 aa10.18□□□□□ -0.78
CHMP1A-210ENST00000551981 HOXA1P49639 335 aaPredicted RBP10.18□□□□□ -0.78
CHMP1A-210ENST00000551981 SNRPD3P62318 126 aaKnown RBP10.18□□□□□ -0.78
CHMP1A-210ENST00000551981 LYSMD2Q8IV50 215 aa10.18□□□□□ -0.78
CHMP1A-210ENST00000551981 SAMD12Q8N8I0 201 aa10.18□□□□□ -0.78
CHMP1A-210ENST00000551981 OR4X1Q8NH49 305 aa10.18□□□□□ -0.78
CHMP1A-210ENST00000551981 FAM210BQ96KR6 192 aa10.18□□□□□ -0.78
CHMP1A-210ENST00000551981 XCL2Q9UBD3 114 aa10.18□□□□□ -0.78
CHMP1A-210ENST00000551981 TMEM189A5PLL7 270 aa10.17□□□□□ -0.78
CHMP1A-210ENST00000551981 CD74P04233 296 aa10.17□□□□□ -0.78
CHMP1A-210ENST00000551981 SPART-AS1P0CW21 52 aa10.17□□□□□ -0.78
CHMP1A-210ENST00000551981 RNASE2P10153 161 aaKnown RBP10.17□□□□□ -0.78
CHMP1A-210ENST00000551981 AKR1C2P52895 323 aa10.17□□□□□ -0.78
CHMP1A-210ENST00000551981 UCP3P55916 312 aa10.17□□□□□ -0.78
CHMP1A-210ENST00000551981 IZUMO4Q1ZYL8 232 aa10.17□□□□□ -0.78
CHMP1A-210ENST00000551981 SCRT1Q9BWW7 348 aa10.17□□□□□ -0.78
CHMP1A-210ENST00000551981 IGLV2-18A0A075B6J9 118 aa10.16□□□□□ -0.78
CHMP1A-210ENST00000551981 TEX48A0A1B0GUV7 120 aa10.16□□□□□ -0.78
CHMP1A-210ENST00000551981 RPL5P46777 297 aaKnown RBP10.16□□□□□ -0.78
CHMP1A-210ENST00000551981 TIGITQ495A1 244 aa10.16□□□□□ -0.78
CHMP1A-210ENST00000551981 Q6ZR54 194 aa10.16□□□□□ -0.78
CHMP1A-210ENST00000551981 ZNF575Q86XF7 245 aa10.16□□□□□ -0.78
CHMP1A-210ENST00000551981 NEU1Q99519 415 aa10.16□□□□□ -0.78
CHMP1A-210ENST00000551981 YTHDF1Q9BYJ9 559 aaKnown RBP10.16□□□□□ -0.78
CHMP1A-210ENST00000551981 SEPSECSQ9HD40 501 aaKnown RBP10.16□□□□□ -0.78
CHMP1A-210ENST00000551981 MRPL36Q9P0J6 103 aaKnown RBP10.16□□□□□ -0.78
CHMP1A-210ENST00000551981 HSPG2P98160 4391 aa10.16□□□□□ -0.78
CHMP1A-210ENST00000551981 A0A0B4J293 547 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 RPS10-NUDT3A0A1W2PQS6 291 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 SMIM9A6NGZ8 99 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 IGKV1-17P01599 117 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 IGKV1-5P01602 117 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 HNRNPCP07910 306 aaKnown RBP eCLIP10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 ETV6P41212 452 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 EMP1P54849 157 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 RNF212Q495C1 297 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 C16orf54Q6UWD8 224 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 OR1S2Q8NGQ3 325 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 Q8WTZ3 238 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 GLMPQ8WWB7 406 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 FNDC4Q9H6D8 234 aaPredicted RBP10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 PLA2G2EQ9NZK7 142 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 U3KQE9 123 aa10.15□□□□□ -0.78
CHMP1A-210ENST00000551981 FAM90A26D6RGX4 464 aa10.14□□□□□ -0.79
CHMP1A-210ENST00000551981 H3BMM0 161 aa10.14□□□□□ -0.79
CHMP1A-210ENST00000551981 PGAM2P15259 253 aa10.14□□□□□ -0.79
CHMP1A-210ENST00000551981 RCVRNP35243 200 aa10.14□□□□□ -0.79
CHMP1A-210ENST00000551981 RND3P61587 244 aa10.14□□□□□ -0.79
CHMP1A-210ENST00000551981 ZNF705AQ6ZN79 300 aaPredicted RBP10.14□□□□□ -0.79
CHMP1A-210ENST00000551981 Q6ZRM9 215 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms