RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 ZNF818PQ6ZRF7 136 aa9.99□□□□□ -0.81
VPS29-209ENST00000551655 TMEM56Q96MV1 263 aa9.99□□□□□ -0.81
VPS29-209ENST00000551655 SLC5A7Q9GZV3 580 aa9.99□□□□□ -0.81
VPS29-209ENST00000551655 COMMD9Q9P000 198 aa9.99□□□□□ -0.81
VPS29-209ENST00000551655 PSORS1C1Q9UIG5 152 aa9.99□□□□□ -0.81
VPS29-209ENST00000551655 TMEM235A6NFC5 223 aa9.98□□□□□ -0.81
VPS29-209ENST00000551655 SSX5O60225 188 aa9.98□□□□□ -0.81
VPS29-209ENST00000551655 DNAH10OSP0CZ25 163 aa9.98□□□□□ -0.81
VPS29-209ENST00000551655 GNRHRP30968 328 aa9.98□□□□□ -0.81
VPS29-209ENST00000551655 FCN2Q15485 313 aa9.98□□□□□ -0.81
VPS29-209ENST00000551655 GLMPQ8WWB7 406 aa9.98□□□□□ -0.81
VPS29-209ENST00000551655 C7orf50Q9BRJ6 194 aaKnown RBP9.98□□□□□ -0.81
VPS29-209ENST00000551655 ATG5Q9H1Y0 275 aa9.98□□□□□ -0.81
VPS29-209ENST00000551655 CIB2O75838 187 aa9.97□□□□□ -0.81
VPS29-209ENST00000551655 SNAPC5O75971 98 aa9.97□□□□□ -0.81
VPS29-209ENST00000551655 PPYP01298 95 aa9.97□□□□□ -0.81
VPS29-209ENST00000551655 NPBWR1P48145 328 aa9.97□□□□□ -0.81
VPS29-209ENST00000551655 SNRPD3P62318 126 aaKnown RBP9.97□□□□□ -0.81
VPS29-209ENST00000551655 RRN3P1Q2M238 152 aa9.97□□□□□ -0.81
VPS29-209ENST00000551655 SPINK9Q5DT21 86 aa9.97□□□□□ -0.81
VPS29-209ENST00000551655 HACD4Q5VWC8 232 aa9.97□□□□□ -0.81
VPS29-209ENST00000551655 CYGBQ8WWM9 190 aa9.97□□□□□ -0.81
VPS29-209ENST00000551655 FCAMRQ8WWV6 532 aa9.97□□□□□ -0.81
VPS29-209ENST00000551655 LSM2Q9Y333 95 aaKnown RBP9.97□□□□□ -0.81
VPS29-209ENST00000551655 FAT3Q8TDW7 4589 aa9.97□□□□□ -0.81
VPS29-209ENST00000551655 FCER2P06734 321 aa9.96□□□□□ -0.82
VPS29-209ENST00000551655 LPAR6P43657 344 aa9.96□□□□□ -0.82
VPS29-209ENST00000551655 MSMO1Q15800 293 aa9.96□□□□□ -0.82
VPS29-209ENST00000551655 TMEM69Q5SWH9 247 aa9.96□□□□□ -0.82
VPS29-209ENST00000551655 CDPF1Q6NVV7 123 aa9.96□□□□□ -0.82
VPS29-209ENST00000551655 C16orf54Q6UWD8 224 aa9.96□□□□□ -0.82
VPS29-209ENST00000551655 TPRA1Q86W33 373 aa9.96□□□□□ -0.82
VPS29-209ENST00000551655 TMEM17Q86X19 198 aa9.96□□□□□ -0.82
VPS29-209ENST00000551655 ZBTB34Q8NCN2 500 aa9.96□□□□□ -0.82
VPS29-209ENST00000551655 PRNDQ9UKY0 176 aa9.96□□□□□ -0.82
VPS29-209ENST00000551655 GOLT1BQ9Y3E0 138 aa9.96□□□□□ -0.82
VPS29-209ENST00000551655 IFNA5P01569 189 aa9.95□□□□□ -0.82
VPS29-209ENST00000551655 RLN1P04808 185 aa9.95□□□□□ -0.82
VPS29-209ENST00000551655 RAB6AP20340 208 aa9.95□□□□□ -0.82
VPS29-209ENST00000551655 ALDH3B2P48448 385 aa9.95□□□□□ -0.82
VPS29-209ENST00000551655 MLANAQ16655 118 aa9.95□□□□□ -0.82
VPS29-209ENST00000551655 KCTD21Q4G0X4 260 aa9.95□□□□□ -0.82
VPS29-209ENST00000551655 ZNF114Q8NC26 417 aa9.95□□□□□ -0.82
VPS29-209ENST00000551655 BPIFB6Q8NFQ5 453 aa9.95□□□□□ -0.82
VPS29-209ENST00000551655 OR4B1Q8NGF8 309 aa9.95□□□□□ -0.82
VPS29-209ENST00000551655 TMEM230Q96A57 120 aa9.95□□□□□ -0.82
VPS29-209ENST00000551655 MND1Q9BWT6 205 aa9.95□□□□□ -0.82
VPS29-209ENST00000551655 U3KQE9 123 aa9.95□□□□□ -0.82
VPS29-209ENST00000551655 METTL21EPA6NDL7 271 aa9.94□□□□□ -0.82
VPS29-209ENST00000551655 ZNF705GA8MUZ8 300 aaPredicted RBP9.94□□□□□ -0.82
VPS29-209ENST00000551655 ARL6IP5O75915 188 aa9.94□□□□□ -0.82
VPS29-209ENST00000551655 ARPC4P59998 168 aa9.94□□□□□ -0.82
VPS29-209ENST00000551655 FABP5Q01469 135 aa9.94□□□□□ -0.82
VPS29-209ENST00000551655 SPHARQ15513 63 aa9.94□□□□□ -0.82
VPS29-209ENST00000551655 TIGITQ495A1 244 aa9.94□□□□□ -0.82
VPS29-209ENST00000551655 NARS2Q96I59 477 aaKnown RBP9.94□□□□□ -0.82
VPS29-209ENST00000551655 NRN1Q9NPD7 142 aa9.94□□□□□ -0.82
VPS29-209ENST00000551655 TNFRSF18Q9Y5U5 241 aa9.94□□□□□ -0.82
VPS29-209ENST00000551655 F6UB75 175 aa9.93□□□□□ -0.82
VPS29-209ENST00000551655 ATP8B1O43520 1251 aa9.93□□□□□ -0.82
VPS29-209ENST00000551655 GNAO1P09471 354 aa9.93□□□□□ -0.82
VPS29-209ENST00000551655 F2RP25116 425 aa9.93□□□□□ -0.82
VPS29-209ENST00000551655 EIF2B2P49770 351 aaKnown RBP9.93□□□□□ -0.82
VPS29-209ENST00000551655 GNG2P59768 71 aa9.93□□□□□ -0.82
VPS29-209ENST00000551655 ERVFC1-1P60608 527 aa9.93□□□□□ -0.82
VPS29-209ENST00000551655 LGALS14Q8TCE9 139 aa9.93□□□□□ -0.82
VPS29-209ENST00000551655 UFD1Q92890 307 aa9.93□□□□□ -0.82
VPS29-209ENST00000551655 LINC00052Q96N35 136 aa9.93□□□□□ -0.82
VPS29-209ENST00000551655 MAGT1Q9H0U3 335 aa9.93□□□□□ -0.82
VPS29-209ENST00000551655 SAV1Q9H4B6 383 aaPredicted RBP9.93□□□□□ -0.82
VPS29-209ENST00000551655 FKBP14Q9NWM8 211 aa9.93□□□□□ -0.82
VPS29-209ENST00000551655 DNAH8Q96JB1 4490 aa9.92□□□□□ -0.82
VPS29-209ENST00000551655 A0A1W2PPQ1 181 aa9.92□□□□□ -0.82
VPS29-209ENST00000551655 SMIM30A4D0T7 59 aa9.92□□□□□ -0.82
VPS29-209ENST00000551655 IFITM5A6NNB3 132 aa9.92□□□□□ -0.82
VPS29-209ENST00000551655 EREGO14944 169 aa9.92□□□□□ -0.82
VPS29-209ENST00000551655 IGKV1-17P01599 117 aa9.92□□□□□ -0.82
VPS29-209ENST00000551655 NKX2-1P43699 371 aaPredicted RBP9.92□□□□□ -0.82
VPS29-209ENST00000551655 PRCDQ00LT1 54 aa9.92□□□□□ -0.82
VPS29-209ENST00000551655 ESRGQ1W209 222 aa9.92□□□□□ -0.82
VPS29-209ENST00000551655 PQLC1Q8N2U9 271 aa9.92□□□□□ -0.82
VPS29-209ENST00000551655 FNDC4Q9H6D8 234 aaPredicted RBP9.92□□□□□ -0.82
VPS29-209ENST00000551655 LYRM9A8MSI8 78 aa9.91□□□□□ -0.82
VPS29-209ENST00000551655 CLN5O75503 358 aa9.91□□□□□ -0.82
VPS29-209ENST00000551655 PGLYRP1O75594 196 aaPredicted RBP9.91□□□□□ -0.82
VPS29-209ENST00000551655 ATP5G1P05496 136 aa9.91□□□□□ -0.82
VPS29-209ENST00000551655 HNRNPCP07910 306 aaKnown RBP eCLIP9.91□□□□□ -0.82
VPS29-209ENST00000551655 HSMCR30P0CW71 290 aa9.91□□□□□ -0.82
VPS29-209ENST00000551655 ATP5G3P48201 142 aa9.91□□□□□ -0.82
VPS29-209ENST00000551655 RASSF2P50749 326 aa9.91□□□□□ -0.82
VPS29-209ENST00000551655 ZFP1Q6P2D0 407 aa9.91□□□□□ -0.82
VPS29-209ENST00000551655 BEST4Q8NFU0 473 aa9.91□□□□□ -0.82
VPS29-209ENST00000551655 FCGR1BQ92637 280 aa9.91□□□□□ -0.82
VPS29-209ENST00000551655 UPK3BQ9BT76 320 aa9.91□□□□□ -0.82
VPS29-209ENST00000551655 TMEM208Q9BTX3 173 aa9.91□□□□□ -0.82
VPS29-209ENST00000551655 WDR12Q9GZL7 423 aaKnown RBP9.91□□□□□ -0.82
VPS29-209ENST00000551655 FKBP11Q9NYL4 201 aa9.91□□□□□ -0.82
VPS29-209ENST00000551655 LOC100996750A0A140TA64 210 aa9.9□□□□□ -0.82
VPS29-209ENST00000551655 PLAC8L1A1L4L8 177 aa9.9□□□□□ -0.82
VPS29-209ENST00000551655 M0QYG6 137 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms