RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 PSMB11A5LHX3 300 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 C17orf112F2Z3M2 114 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 FABP1P07148 127 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 FCGR2BP31994 310 aaPredicted RBP8.14□□□□□ -1.11
NEK3-203ENST00000551355 NPBWR1P48145 328 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 MFAP4P55083 255 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 RHOGP84095 191 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 ATP5G2Q06055 141 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 FOXE3Q13461 319 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 GAMTQ14353 236 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 RPL7L1Q6DKI1 246 aaKnown RBP8.14□□□□□ -1.11
NEK3-203ENST00000551355 Q6ZSV7 163 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 CENPVQ7Z7K6 275 aaPredicted RBP8.14□□□□□ -1.11
NEK3-203ENST00000551355 ZNF709Q8N972 641 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 OR4F5Q8NH21 305 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 OR4X1Q8NH49 305 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 BSCL2Q96G97 398 aaPredicted RBP8.14□□□□□ -1.11
NEK3-203ENST00000551355 NOL4LQ96MY1 436 aaPredicted RBP8.14□□□□□ -1.11
NEK3-203ENST00000551355 WDR61Q9GZS3 305 aaKnown RBP8.14□□□□□ -1.11
NEK3-203ENST00000551355 ARV1Q9H2C2 271 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 WFDC1Q9HC57 220 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 WDR83OSQ9Y284 106 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 TIMM9Q9Y5J7 89 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 DMRT1Q9Y5R6 373 aa8.14□□□□□ -1.11
NEK3-203ENST00000551355 TNCP24821 2201 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 A0A1B0GUS0 222 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 UBE2L5PA0A1B0GUS4 154 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 K7EIM0 57 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 OR2J3O76001 311 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 IFNA7P01567 189 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 TRGV3P03979 118 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 MDKP21741 143 aaPredicted RBP8.13□□□□□ -1.11
NEK3-203ENST00000551355 PSMB8P28062 276 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 C15orf32Q32M92 178 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 ACSM6Q6P461 480 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 BTNL8Q6UX41 500 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 TREML4Q6UXN2 200 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 RNF152Q8N8N0 203 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 SCARB1Q8WTV0 552 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 ST8SIA2Q92186 375 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 TAF15Q92804 592 aaKnown RBP eCLIP8.13□□□□□ -1.11
NEK3-203ENST00000551355 EEF1AKMT3Q96AZ1 226 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 GINS3Q9BRX5 216 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 PSMG3Q9BT73 122 aaPredicted RBP8.13□□□□□ -1.11
NEK3-203ENST00000551355 FNDC4Q9H6D8 234 aaPredicted RBP8.13□□□□□ -1.11
NEK3-203ENST00000551355 SERTAD4Q9NUC0 356 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 C21orf62Q9NYP8 219 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 LINC00527Q9UJ94 153 aa8.13□□□□□ -1.11
NEK3-203ENST00000551355 LSM4Q9Y4Z0 139 aaKnown RBP8.13□□□□□ -1.11
NEK3-203ENST00000551355 SONP18583 2426 aaKnown RBP8.12□□□□□ -1.11
NEK3-203ENST00000551355 CLN5O75503 358 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 NDUFB8O95169 186 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 CFDP00746 253 aaPredicted RBP8.12□□□□□ -1.11
NEK3-203ENST00000551355 PRH1P02810 166 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 SEC11BP0C7V7 166 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 PF4V1P10720 104 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 FGF7P21781 194 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 RAB9AP51151 201 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 RND2P52198 227 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 TPPP2P59282 170 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 SELENOTP62341 195 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 SERF2P84101 59 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 THAP8Q8NA92 274 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 OR4X2Q8NGF9 303 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 WFDC12Q8WWY7 111 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 NPIPB3Q92617 1050 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 ACY3Q96HD9 319 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 MXRA5Q9NR99 2828 aa8.12□□□□□ -1.11
NEK3-203ENST00000551355 ZFP92A6NM28 416 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 UMAD1C9J7I0 102 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 GNG7O60262 68 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 MBP02144 154 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 SPP1P10451 314 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 CAMLGP49069 296 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 RAB5CP51148 216 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 MLANAQ16655 118 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 TMEM95Q3KNT9 176 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 SPSB3Q6PJ21 355 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 TEX261Q6UWH6 196 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 C19orf35Q6ZS72 473 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 KLHDC1Q8N7A1 406 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 HSD17B11Q8NBQ5 300 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 ZNF502Q8TBZ5 544 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 MS4A10Q96PG2 267 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 TRGV9Q99603 122 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 NPCDR1Q9BY65 106 aa8.11□□□□□ -1.11
NEK3-203ENST00000551355 TCRBV4S1A1TA0A5B7 111 aa8.1□□□□□ -1.11
NEK3-203ENST00000551355 CLPSL1A2RUU4 121 aa8.1□□□□□ -1.11
NEK3-203ENST00000551355 AGPAT2O15120 278 aa8.1□□□□□ -1.11
NEK3-203ENST00000551355 NUPL2O15504 423 aaKnown RBP8.1□□□□□ -1.11
NEK3-203ENST00000551355 ATP6V0CP27449 155 aa8.1□□□□□ -1.11
NEK3-203ENST00000551355 OR10J1P30954 320 aa8.1□□□□□ -1.11
NEK3-203ENST00000551355 RPL29P47914 159 aaKnown RBP8.1□□□□□ -1.11
NEK3-203ENST00000551355 YPEL3P61236 119 aaPredicted RBP8.1□□□□□ -1.11
NEK3-203ENST00000551355 Q56UQ5 140 aa8.1□□□□□ -1.11
NEK3-203ENST00000551355 PXDC1Q5TGL8 231 aa8.1□□□□□ -1.11
NEK3-203ENST00000551355 ZNF767PQ75MW2 155 aa8.1□□□□□ -1.11
NEK3-203ENST00000551355 S100A7AQ86SG5 101 aa8.1□□□□□ -1.11
NEK3-203ENST00000551355 ZNF329Q86UD4 541 aa8.1□□□□□ -1.11
NEK3-203ENST00000551355 OR5AU1Q8NGC0 362 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms