RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 NQO2P16083 231 aa8.97□□□□□ -0.97
SNRPF-203ENST00000551316 HOXB6P17509 224 aaKnown RBP8.97□□□□□ -0.97
SNRPF-203ENST00000551316 M6PRP20645 277 aa8.97□□□□□ -0.97
SNRPF-203ENST00000551316 KCTD21Q4G0X4 260 aa8.97□□□□□ -0.97
SNRPF-203ENST00000551316 FAM78BQ5VT40 261 aa8.97□□□□□ -0.97
SNRPF-203ENST00000551316 TTC23Q5W5X9 447 aa8.97□□□□□ -0.97
SNRPF-203ENST00000551316 AMTNQ6UX39 209 aa8.97□□□□□ -0.97
SNRPF-203ENST00000551316 CADM3Q8N126 398 aa8.97□□□□□ -0.97
SNRPF-203ENST00000551316 Q8N814 137 aa8.97□□□□□ -0.97
SNRPF-203ENST00000551316 DMBX1Q8NFW5 382 aa8.97□□□□□ -0.97
SNRPF-203ENST00000551316 NTN5Q8WTR8 489 aaPredicted RBP8.97□□□□□ -0.97
SNRPF-203ENST00000551316 CLUHP3Q96NS8 147 aa8.97□□□□□ -0.97
SNRPF-203ENST00000551316 NRN1Q9NPD7 142 aa8.97□□□□□ -0.97
SNRPF-203ENST00000551316 CCL28Q9NRJ3 127 aa8.97□□□□□ -0.97
SNRPF-203ENST00000551316 OR51B2Q9Y5P1 312 aa8.97□□□□□ -0.97
SNRPF-203ENST00000551316 MARCH11A6NNE9 402 aa8.96□□□□□ -0.98
SNRPF-203ENST00000551316 TMEM50AO95807 157 aa8.96□□□□□ -0.98
SNRPF-203ENST00000551316 PSG9Q00887 426 aa8.96□□□□□ -0.98
SNRPF-203ENST00000551316 WFDC2Q14508 124 aa8.96□□□□□ -0.98
SNRPF-203ENST00000551316 FOXI2Q6ZQN5 318 aa8.96□□□□□ -0.98
SNRPF-203ENST00000551316 NFE4Q86UQ8 179 aa8.96□□□□□ -0.98
SNRPF-203ENST00000551316 RHOXF1Q8NHV9 184 aa8.96□□□□□ -0.98
SNRPF-203ENST00000551316 VSIG2Q96IQ7 327 aa8.96□□□□□ -0.98
SNRPF-203ENST00000551316 TMEM208Q9BTX3 173 aa8.96□□□□□ -0.98
SNRPF-203ENST00000551316 POMPQ9Y244 141 aa8.96□□□□□ -0.98
SNRPF-203ENST00000551316 SNTNA6NMZ2 147 aa8.95□□□□□ -0.98
SNRPF-203ENST00000551316 NPIPB6E9PJ23 425 aa8.95□□□□□ -0.98
SNRPF-203ENST00000551316 RS1O15537 224 aa8.95□□□□□ -0.98
SNRPF-203ENST00000551316 RBFOX2O43251 390 aaKnown RBP eCLIP8.95□□□□□ -0.98
SNRPF-203ENST00000551316 FGF2P09038 288 aa8.95□□□□□ -0.98
SNRPF-203ENST00000551316 PAX9P55771 341 aa8.95□□□□□ -0.98
SNRPF-203ENST00000551316 TMPRSS11AQ6ZMR5 421 aa8.95□□□□□ -0.98
SNRPF-203ENST00000551316 Q6ZS49 121 aa8.95□□□□□ -0.98
SNRPF-203ENST00000551316 BAP18Q8IXM2 172 aa8.95□□□□□ -0.98
SNRPF-203ENST00000551316 IGF2BP2-AS1Q96M15 143 aa8.95□□□□□ -0.98
SNRPF-203ENST00000551316 MSRB1Q9NZV6 116 aa8.95□□□□□ -0.98
SNRPF-203ENST00000551316 LOC100996750A0A140TA64 210 aa8.94□□□□□ -0.98
SNRPF-203ENST00000551316 M0R2Z0 102 aa8.94□□□□□ -0.98
SNRPF-203ENST00000551316 WBP4O75554 376 aaKnown RBP8.94□□□□□ -0.98
SNRPF-203ENST00000551316 HPRT1P00492 218 aa8.94□□□□□ -0.98
SNRPF-203ENST00000551316 ALPLP05186 524 aa8.94□□□□□ -0.98
SNRPF-203ENST00000551316 PTHLHP12272 177 aa8.94□□□□□ -0.98
SNRPF-203ENST00000551316 OR56B1Q8NGI3 324 aa8.94□□□□□ -0.98
SNRPF-203ENST00000551316 LINC00052Q96N35 136 aa8.94□□□□□ -0.98
SNRPF-203ENST00000551316 KRTAP4-6Q9BYQ5 205 aa8.94□□□□□ -0.98
SNRPF-203ENST00000551316 SOCS3O14543 225 aa8.93□□□□□ -0.98
SNRPF-203ENST00000551316 IGKV1-17P01599 117 aa8.93□□□□□ -0.98
SNRPF-203ENST00000551316 TSPOP30536 169 aa8.93□□□□□ -0.98
SNRPF-203ENST00000551316 MRPS15P82914 257 aaKnown RBP8.93□□□□□ -0.98
SNRPF-203ENST00000551316 TIGITQ495A1 244 aa8.93□□□□□ -0.98
SNRPF-203ENST00000551316 OR51H1Q8NH63 302 aa8.93□□□□□ -0.98
SNRPF-203ENST00000551316 GPR146Q96CH1 333 aa8.93□□□□□ -0.98
SNRPF-203ENST00000551316 RAB3CQ96E17 227 aa8.93□□□□□ -0.98
SNRPF-203ENST00000551316 SEPSECSQ9HD40 501 aaKnown RBP8.93□□□□□ -0.98
SNRPF-203ENST00000551316 A0A0J9YX75 114 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 TMEM272A0A1B0GTI8 110 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 A8MTW9 85 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 EI24O14681 340 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 IGLV2-8P01709 118 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 SSX1Q16384 188 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 MLANAQ16655 118 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 SPINK13Q1W4C9 94 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 SPINK9Q5DT21 86 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 SIGLEC15Q6ZMC9 328 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 TMED4Q7Z7H5 227 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 CIRBP-AS1Q8TBR5 109 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 SECTM1Q8WVN6 248 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 C20orf173Q96LM9 149 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 SCPEP1Q9HB40 452 aa8.92□□□□□ -0.98
SNRPF-203ENST00000551316 NOP10Q9NPE3 64 aaKnown RBP8.92□□□□□ -0.98
SNRPF-203ENST00000551316 SLC17A2O00624 439 aa8.91□□□□□ -0.98
SNRPF-203ENST00000551316 SLC22A5O76082 557 aa8.91□□□□□ -0.98
SNRPF-203ENST00000551316 HIST1H1DP16402 221 aaKnown RBP8.91□□□□□ -0.98
SNRPF-203ENST00000551316 NPBWR1P48145 328 aa8.91□□□□□ -0.98
SNRPF-203ENST00000551316 HOXA1P49639 335 aaPredicted RBP8.91□□□□□ -0.98
SNRPF-203ENST00000551316 WFDC10BQ8IUB3 73 aa8.91□□□□□ -0.98
SNRPF-203ENST00000551316 LINC00612Q8N6U2 182 aa8.91□□□□□ -0.98
SNRPF-203ENST00000551316 OR13F1Q8NGS4 319 aa8.91□□□□□ -0.98
SNRPF-203ENST00000551316 TRAV12-2A0A075B6T6 113 aa8.9□□□□□ -0.98
SNRPF-203ENST00000551316 HNRNPCP07910 306 aaKnown RBP eCLIP8.9□□□□□ -0.98
SNRPF-203ENST00000551316 G6PCP35575 357 aa8.9□□□□□ -0.98
SNRPF-203ENST00000551316 PHYHIPQ92561 330 aa8.9□□□□□ -0.98
SNRPF-203ENST00000551316 TMPRSS5Q9H3S3 457 aa8.9□□□□□ -0.98
SNRPF-203ENST00000551316 PLEKHA2Q9HB19 425 aa8.9□□□□□ -0.98
SNRPF-203ENST00000551316 PLGRKTQ9HBL7 147 aa8.9□□□□□ -0.98
SNRPF-203ENST00000551316 COMMD9Q9P000 198 aa8.9□□□□□ -0.98
SNRPF-203ENST00000551316 DIMT1Q9UNQ2 313 aaKnown RBP8.9□□□□□ -0.98
SNRPF-203ENST00000551316 MAPK3P27361 379 aaPredicted RBP8.89□□□□□ -0.99
SNRPF-203ENST00000551316 EIF2B2P49770 351 aaKnown RBP8.89□□□□□ -0.99
SNRPF-203ENST00000551316 OR10R2Q8NGX6 335 aa8.89□□□□□ -0.99
SNRPF-203ENST00000551316 TMEM230Q96A57 120 aa8.89□□□□□ -0.99
SNRPF-203ENST00000551316 TMEM56Q96MV1 263 aa8.89□□□□□ -0.99
SNRPF-203ENST00000551316 AIFM2Q9BRQ8 373 aa8.89□□□□□ -0.99
SNRPF-203ENST00000551316 LINC00467Q9BRT7 94 aa8.89□□□□□ -0.99
SNRPF-203ENST00000551316 AK6Q9Y3D8 172 aaKnown RBP8.89□□□□□ -0.99
SNRPF-203ENST00000551316 H3BNG1 76 aa8.88□□□□□ -0.99
SNRPF-203ENST00000551316 BUB3O43684 328 aa8.88□□□□□ -0.99
SNRPF-203ENST00000551316 CLN5O75503 358 aa8.88□□□□□ -0.99
SNRPF-203ENST00000551316 KRASP01116 189 aa8.88□□□□□ -0.99
SNRPF-203ENST00000551316 INSP01308 110 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms