RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 TM4SF20Q53R12 229 aa11.65□□□□□ -0.54
PRPF40B-211ENST00000551063 GTSCR1Q86UQ5 136 aa11.65□□□□□ -0.54
PRPF40B-211ENST00000551063 OR1S1Q8NH92 325 aa11.65□□□□□ -0.54
PRPF40B-211ENST00000551063 RNASEH2CQ8TDP1 164 aaKnown RBP11.65□□□□□ -0.54
PRPF40B-211ENST00000551063 FLVCR2Q9UPI3 526 aa11.65□□□□□ -0.54
PRPF40B-211ENST00000551063 HUWE1Q7Z6Z7 4374 aaKnown RBP11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 IZUMO1RA6ND01 250 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 C15orf62A8K5M9 175 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 FAM90A26D6RGX4 464 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 K7EMT4 169 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 SCGB2A1O75556 95 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 NXPH3O95157 252 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 IGHV3-48P01763 117 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 OR4E1P0C645 316 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 NPY1RP25929 384 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 ATP5IP56385 69 aaPredicted RBP11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 DHRS2Q13268 280 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 LYG2Q86SG7 212 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 Q8N1Y9 231 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 OR4X1Q8NH49 305 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 COQ8AQ8NI60 647 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 DTD1Q8TEA8 209 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 FNDC4Q9H6D8 234 aaPredicted RBP11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 MLXQ9UH92 298 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 U3KQ87 197 aa11.64□□□□□ -0.55
PRPF40B-211ENST00000551063 TRAV25A0A0B4J276 109 aa11.63□□□□□ -0.55
PRPF40B-211ENST00000551063 A8MZ25 164 aa11.63□□□□□ -0.55
PRPF40B-211ENST00000551063 CLN5O75503 358 aa11.63□□□□□ -0.55
PRPF40B-211ENST00000551063 ANXA7P20073 488 aaKnown RBP11.63□□□□□ -0.55
PRPF40B-211ENST00000551063 C11orf87Q6NUJ2 197 aa11.63□□□□□ -0.55
PRPF40B-211ENST00000551063 BTNL8Q6UX41 500 aa11.63□□□□□ -0.55
PRPF40B-211ENST00000551063 TMEM61Q8N0U2 210 aa11.63□□□□□ -0.55
PRPF40B-211ENST00000551063 TMEM170AQ8WVE7 144 aa11.63□□□□□ -0.55
PRPF40B-211ENST00000551063 ZNF414Q96IQ9 312 aa11.63□□□□□ -0.55
PRPF40B-211ENST00000551063 C20orf24Q9BUV8 137 aa11.63□□□□□ -0.55
PRPF40B-211ENST00000551063 WDR12Q9GZL7 423 aaKnown RBP11.63□□□□□ -0.55
PRPF40B-211ENST00000551063 C20orf85Q9H1P6 137 aa11.63□□□□□ -0.55
PRPF40B-211ENST00000551063 RBKSQ9H477 322 aa11.63□□□□□ -0.55
PRPF40B-211ENST00000551063 ZNF785A8K8V0 405 aa11.62□□□□□ -0.55
PRPF40B-211ENST00000551063 HOXB5P09067 269 aa11.62□□□□□ -0.55
PRPF40B-211ENST00000551063 NHLRC4P0CG21 123 aaPredicted RBP11.62□□□□□ -0.55
PRPF40B-211ENST00000551063 SLC25A4P12235 298 aa11.62□□□□□ -0.55
PRPF40B-211ENST00000551063 C4orf46Q504U0 113 aa11.62□□□□□ -0.55
PRPF40B-211ENST00000551063 GGNBP1Q5YKI7 109 aa11.62□□□□□ -0.55
PRPF40B-211ENST00000551063 ZNF600Q6ZNG1 722 aa11.62□□□□□ -0.55
PRPF40B-211ENST00000551063 OR10C1Q96KK4 312 aa11.62□□□□□ -0.55
PRPF40B-211ENST00000551063 MED6O75586 246 aa11.61□□□□□ -0.55
PRPF40B-211ENST00000551063 YIF1AO95070 293 aa11.61□□□□□ -0.55
PRPF40B-211ENST00000551063 TMEM50AO95807 157 aa11.61□□□□□ -0.55
PRPF40B-211ENST00000551063 IFNA10P01566 189 aa11.61□□□□□ -0.55
PRPF40B-211ENST00000551063 ZNF846Q147U1 533 aa11.61□□□□□ -0.55
PRPF40B-211ENST00000551063 ETFRF1Q6IPR1 90 aa11.61□□□□□ -0.55
PRPF40B-211ENST00000551063 WDR89Q96FK6 387 aaPredicted RBP11.61□□□□□ -0.55
PRPF40B-211ENST00000551063 GINS3Q9BRX5 216 aa11.61□□□□□ -0.55
PRPF40B-211ENST00000551063 MRPL36Q9P0J6 103 aaKnown RBP11.61□□□□□ -0.55
PRPF40B-211ENST00000551063 TRAV30A0A087WSZ9 112 aa11.6□□□□□ -0.55
PRPF40B-211ENST00000551063 TCRBP04435 133 aa11.6□□□□□ -0.55
PRPF40B-211ENST00000551063 FRMD6-AS1P0C7T7 363 aa11.6□□□□□ -0.55
PRPF40B-211ENST00000551063 IGHV4-30-4P0DP06 118 aa11.6□□□□□ -0.55
PRPF40B-211ENST00000551063 CD81P60033 236 aa11.6□□□□□ -0.55
PRPF40B-211ENST00000551063 GUCA2BQ16661 112 aa11.6□□□□□ -0.55
PRPF40B-211ENST00000551063 PRSS54Q6PEW0 395 aa11.6□□□□□ -0.55
PRPF40B-211ENST00000551063 WWC2-AS2Q96NR7 200 aa11.6□□□□□ -0.55
PRPF40B-211ENST00000551063 CIB3Q96Q77 187 aaPredicted RBP11.6□□□□□ -0.55
PRPF40B-211ENST00000551063 C19orf73Q9NVV2 129 aa11.6□□□□□ -0.55
PRPF40B-211ENST00000551063 IGHV7-4-1A0A0J9YVY3 117 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 ADAP1O75689 374 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 IFNA21P01568 189 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 BMI1P35226 326 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 ASAH1Q13510 395 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 MLANAQ16655 118 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 LAMTOR1Q6IAA8 161 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 TOMM20LQ6UXN7 152 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 RBPMS2Q6ZRY4 209 aaKnown RBP11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 SLC16A13Q7RTY0 426 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 TMEM116Q8NCL8 245 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 OR1S2Q8NGQ3 325 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 MITD1Q8WV92 249 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 SPAG8Q99932 426 aaPredicted RBP11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 NEURL2Q9BR09 285 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 ZFAND3Q9H8U3 227 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 NUDT15Q9NV35 164 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 TBC1D24Q9ULP9 559 aa11.59□□□□□ -0.55
PRPF40B-211ENST00000551063 IGHV3OR16-8A0A075B7F1 116 aa11.58□□□□□ -0.56
PRPF40B-211ENST00000551063 TRAV14DV4A0A0A6YYC5 116 aa11.58□□□□□ -0.56
PRPF40B-211ENST00000551063 TSPAN4O14817 238 aa11.58□□□□□ -0.56
PRPF40B-211ENST00000551063 ZNF207O43670 478 aaKnown RBP11.58□□□□□ -0.56
PRPF40B-211ENST00000551063 UPK1BO75841 260 aa11.58□□□□□ -0.56
PRPF40B-211ENST00000551063 IGKV1-17P01599 117 aa11.58□□□□□ -0.56
PRPF40B-211ENST00000551063 IGLC1P0CG04 106 aa11.58□□□□□ -0.56
PRPF40B-211ENST00000551063 RND2P52198 227 aa11.58□□□□□ -0.56
PRPF40B-211ENST00000551063 MZT2BQ6NZ67 158 aa11.58□□□□□ -0.56
PRPF40B-211ENST00000551063 SMPXQ9UHP9 88 aa11.58□□□□□ -0.56
PRPF40B-211ENST00000551063 PUS1Q9Y606 427 aaKnown RBP eCLIP11.58□□□□□ -0.56
PRPF40B-211ENST00000551063 FAM240BA0A1B0GVZ2 78 aa11.57□□□□□ -0.56
PRPF40B-211ENST00000551063 SYNGR2O43760 224 aa11.57□□□□□ -0.56
PRPF40B-211ENST00000551063 SCAF4O95104 1147 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-211ENST00000551063 IFNA4P05014 189 aa11.57□□□□□ -0.56
PRPF40B-211ENST00000551063 CD7P09564 240 aa11.57□□□□□ -0.56
PRPF40B-211ENST00000551063 IAPPP10997 89 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms