RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 C1QTNF6Q9BXI9 259 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 SRRQ9GZT4 340 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 GOLPH3Q9H4A6 298 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 OR2S2Q9NQN1 319 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 NDUFAF1Q9Y375 327 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 ZNF337Q9Y3M9 751 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 POLR3HQ9Y535 204 aaPredicted RBP2.48□□□□□ -2.01
LIMA1-205ENST00000550592 AP4S1Q9Y587 144 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 PUS1Q9Y606 427 aaKnown RBP eCLIP2.48□□□□□ -2.01
LIMA1-205ENST00000550592 DNAH7Q8WXX0 4024 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 METTL15A6NJ78 407 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 RNASEK-C17orf49H0YIS7 233 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 K7EPK0 472 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 RGS5O15539 181 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 ENSAO43768 121 aaKnown RBP2.47□□□□□ -2.01
LIMA1-205ENST00000550592 MFSD11O43934 449 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 COX7A2P2O60397 106 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 IFNA10P01566 189 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 FBP1P09467 338 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 LINC00614P0C842 121 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 INAFM2P0DMQ5 153 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 OR12D1P0DN82 309 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 SLC2A1P11166 492 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 IMPA1P29218 277 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 TGFBR2P37173 567 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 DSCR4P56555 118 aaPredicted RBP2.47□□□□□ -2.01
LIMA1-205ENST00000550592 COPZ1P61923 177 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 BTN3A2P78410 334 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 IFITM2Q01629 132 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 BIKQ13323 160 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 PAFAH1B3Q15102 231 aaKnown RBP2.47□□□□□ -2.01
LIMA1-205ENST00000550592 EXOC3L4Q17RC7 722 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 Q499Y3 187 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 HSD17B12Q53GQ0 312 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 LINC00596Q86U02 117 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 PHF13Q86YI8 300 aaPredicted RBP2.47□□□□□ -2.01
LIMA1-205ENST00000550592 SBSPONQ8IVN8 264 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 SPICQ8N5J4 248 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 OR2D3Q8NGH3 330 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 OR10J5Q8NHC4 309 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 STOML3Q8TAV4 291 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 BLNKQ8WV28 456 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 S100ZQ8WXG8 99 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 SHANK2-AS3Q9BTD1 123 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 MROQ9BYG7 248 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 VSIRQ9H7M9 311 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 PLEKHA1Q9HB21 404 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 COA4Q9NYJ1 87 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 GLTPQ9NZD2 209 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 MAT2BQ9NZL9 334 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 DNAJC27Q9NZQ0 273 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 ENPP5Q9UJA9 477 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 GUCA1BQ9UMX6 200 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 BAIAP2Q9UQB8 552 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 ALG5Q9Y673 324 aa2.47□□□□□ -2.01
LIMA1-205ENST00000550592 A0A1B0GW15 77 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 A0A1B0GXF2 115 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 RFPL4AA6NLU0 287 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 IGLL5B9A064 214 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 RFPL4AL1F8VTS6 287 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 G3V2T6 193 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 FFAR1O14842 300 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 GYG2O15488 501 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 FADS1O60427 444 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 BANF1O75531 89 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 TNFAIP8O95379 198 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 IGHG2P01859 326 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 SERPINA6P08185 405 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 PSKH1P11801 424 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 HSD11B1P28845 292 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 LCN1P31025 176 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 COILP38432 576 aaPredicted RBP2.46□□□□□ -2.02
LIMA1-205ENST00000550592 SRP9P49458 86 aaKnown RBP2.46□□□□□ -2.02
LIMA1-205ENST00000550592 RAB8AP61006 207 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 NCALDP61601 193 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 PSPHP78330 225 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 BNIP2Q12982 314 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 TSPAN31Q12999 210 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 COQ5Q5HYK3 327 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 NCBP2-AS2Q69YL0 99 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 CLEC6AQ6EIG7 209 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 LRRN1Q6UXK5 716 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 LINC00299Q6ZSB3 139 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 SSX6Q7RTT6 188 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 STX19Q8N4C7 294 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 CDRT4Q8N9R6 151 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 LINC00301Q8NCQ3 95 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 OR4K17Q8NGC6 315 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 OR13C4Q8NGS5 318 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 OR10D3Q8NH80 312 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 AP3S1Q92572 193 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 YPEL4Q96NS1 127 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 PCBD2Q9H0N5 130 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 NIT2Q9NQR4 276 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 POFUT2Q9Y2G5 429 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 SNX24Q9Y343 169 aa2.46□□□□□ -2.02
LIMA1-205ENST00000550592 SRRM2Q9UQ35 2752 aaKnown RBP2.46□□□□□ -2.02
LIMA1-205ENST00000550592 A0A1B0GV90 55 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 LINC00862A6NCI5 91 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 CD300LBA8K4G0 201 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms