RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 ATP5L2Q7Z4Y8 100 aa13.2□□□□□ -0.3
RBFOX1-212ENST00000550418 EPDR1Q9UM22 224 aa13.2□□□□□ -0.3
RBFOX1-212ENST00000550418 SH2D7A6NKC9 451 aaPredicted RBP13.2□□□□□ -0.3
RBFOX1-212ENST00000550418 HBDP02042 147 aa13.2□□□□□ -0.3
RBFOX1-212ENST00000550418 TEX45Q8NA69 505 aa13.2□□□□□ -0.3
RBFOX1-212ENST00000550418 C15orf61A6NNL5 157 aa13.2□□□□□ -0.3
RBFOX1-212ENST00000550418 CRYGSP22914 178 aa13.2□□□□□ -0.3
RBFOX1-212ENST00000550418 CACNG7P62955 275 aa13.2□□□□□ -0.3
RBFOX1-212ENST00000550418 FOXI3A8MTJ6 420 aaPredicted RBP13.19□□□□□ -0.3
RBFOX1-212ENST00000550418 IGKV1-5P01602 117 aa13.19□□□□□ -0.3
RBFOX1-212ENST00000550418 DNM1P46Q6ZS02 220 aa13.19□□□□□ -0.3
RBFOX1-212ENST00000550418 IGKV1-27A0A075B6S5 117 aa13.19□□□□□ -0.3
RBFOX1-212ENST00000550418 TMEM50AO95807 157 aa13.19□□□□□ -0.3
RBFOX1-212ENST00000550418 NPSP0C0P6 89 aa13.19□□□□□ -0.3
RBFOX1-212ENST00000550418 PYYP10082 97 aa13.19□□□□□ -0.3
RBFOX1-212ENST00000550418 PSG7Q13046 419 aa13.19□□□□□ -0.3
RBFOX1-212ENST00000550418 FHL1Q13642 323 aa13.19□□□□□ -0.3
RBFOX1-212ENST00000550418 KIR2DL4Q99706 377 aa13.19□□□□□ -0.3
RBFOX1-212ENST00000550418 BMPERQ8N8U9 685 aa13.19□□□□□ -0.3
RBFOX1-212ENST00000550418 COX11Q9Y6N1 276 aa13.19□□□□□ -0.3
RBFOX1-212ENST00000550418 DOCK11Q5JSL3 2073 aa13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 TMEM170BQ5T4T1 132 aa13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 SAMD5Q5TGI4 173 aa13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 KLHDC3Q9BQ90 382 aa13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 MESP1Q9BRJ9 268 aa13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 PILRBQ9UKJ0 227 aa13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 OR9G9P0C7N8 305 aa13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 ID1P41134 155 aa13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 AHRRA9YTQ3 701 aa13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 RAB9AP51151 201 aa13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 OR9G4Q8NGQ1 327 aa13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 NAA38Q9BRA0 125 aaKnown RBP13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 RSPO3Q9BXY4 272 aaPredicted RBP13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 ABCA1O95477 2261 aa13.18□□□□□ -0.3
RBFOX1-212ENST00000550418 IGLV3-32A0A0A0MS00 114 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 KBTBD11-OT1A0A1B0GTJ5 212 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 SIGLEC12Q96PQ1 595 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 SELENOKQ9Y6D0 94 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 BDP1A6H8Y1 2624 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 KIAA2026Q5HYC2 2103 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 GAGE12BA1L429 117 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 PSG1P11464 419 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 C1orf185Q5T7R7 199 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 FER1L6-AS1Q8NA97 138 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 SCGB3A1Q96QR1 104 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 MRPS16Q9Y3D3 137 aaKnown RBP13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 WNK2Q9Y3S1 2297 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 A0A0G2JLM5 398 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 NPIPB6E9PJ23 425 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 ZNF479Q96JC4 524 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 LY96Q9Y6Y9 160 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 LRRK1Q38SD2 2015 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 PI4KAP42356 2102 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 UPK2O00526 184 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 RASL11AQ6T310 242 aa13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 MRPL27Q9P0M9 148 aaKnown RBP13.17□□□□□ -0.3
RBFOX1-212ENST00000550418 EFNA2O43921 213 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 YPEL1O60688 119 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 DUTP33316 252 aaKnown RBP13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 YPEL2Q96QA6 119 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 LOXL3P58215 753 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 Q6ZT83 130 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 OTORQ9NRC9 128 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 hDV102S1A0JD36 115 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 TSPAN13O95857 204 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 LEPP41159 167 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 CD69Q07108 199 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 IFI27L1Q96BM0 104 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 FAM90A9PA6NNJ1 464 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 PRSS8Q16651 343 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 SHISA5Q8N114 240 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 C10orf126Q8N4M7 172 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 SYT8Q8NBV8 401 aa13.16□□□□□ -0.3
RBFOX1-212ENST00000550418 A0A087X0K7 114 aa13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 COQ2Q96H96 371 aa13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 C5orf63A6NC05 138 aa13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 CIRBPQ14011 172 aaKnown RBP13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 SPATA31B1PQ5VZV4 182 aa13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 PPP1R32Q7Z5V6 425 aa13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 TEX29Q8N6K0 151 aa13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 SAP25Q8TEE9 199 aa13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 GP6Q9HCN6 339 aa13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 SEPSECSQ9HD40 501 aaKnown RBP13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 COL4A6Q14031 1691 aa13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 IGHV3-35A0A0C4DH35 117 aa13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 NDUFA3O95167 84 aa13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 SFTA2Q6UW10 78 aa13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 VOPP1Q96AW1 172 aa13.15□□□□□ -0.3
RBFOX1-212ENST00000550418 MAJINQ3KP22 176 aa13.15□□□□□ -0.31
RBFOX1-212ENST00000550418 MORN2Q502X0 79 aa13.15□□□□□ -0.31
RBFOX1-212ENST00000550418 ZNF585BQ52M93 769 aa13.15□□□□□ -0.31
RBFOX1-212ENST00000550418 TMEM105Q8N8V8 129 aa13.15□□□□□ -0.31
RBFOX1-212ENST00000550418 ANAPC13Q9BS18 74 aa13.15□□□□□ -0.31
RBFOX1-212ENST00000550418 FNDC1Q4ZHG4 1894 aaPredicted RBP13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 TCF20Q9UGU0 1960 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 A0A1B0GUS0 222 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 NPIPB11E5RHQ5 1161 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 CELA3AP09093 270 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 SAA1P0DJI8 122 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms