RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 OR10C1Q96KK4 312 aa13.47□□□□□ -0.25
TUBA1A-206ENST00000550254 TM2D3Q9BRN9 247 aa13.47□□□□□ -0.25
TUBA1A-206ENST00000550254 HEYLQ9NQ87 328 aaPredicted RBP13.47□□□□□ -0.25
TUBA1A-206ENST00000550254 NPBWR1P48145 328 aa13.46□□□□□ -0.25
TUBA1A-206ENST00000550254 SMCO1Q147U7 214 aa13.46□□□□□ -0.25
TUBA1A-206ENST00000550254 RBMS2Q15434 407 aaKnown RBP13.46□□□□□ -0.25
TUBA1A-206ENST00000550254 C2orf83Q53S99 150 aa13.46□□□□□ -0.25
TUBA1A-206ENST00000550254 TRIQKQ629K1 86 aa13.46□□□□□ -0.25
TUBA1A-206ENST00000550254 LRTM2Q8N967 370 aa13.46□□□□□ -0.25
TUBA1A-206ENST00000550254 RCHY1Q96PM5 261 aa13.46□□□□□ -0.25
TUBA1A-206ENST00000550254 TUBA4BQ9H853 241 aa13.46□□□□□ -0.25
TUBA1A-206ENST00000550254 HSPB7Q9UBY9 170 aa13.46□□□□□ -0.25
TUBA1A-206ENST00000550254 NAP1L6A6NFF2 107 aa13.45□□□□□ -0.26
TUBA1A-206ENST00000550254 OR11H12B2RN74 326 aa13.45□□□□□ -0.26
TUBA1A-206ENST00000550254 YIF1AO95070 293 aa13.45□□□□□ -0.26
TUBA1A-206ENST00000550254 SFT2D2O95562 160 aa13.45□□□□□ -0.26
TUBA1A-206ENST00000550254 VAMP1P23763 118 aa13.45□□□□□ -0.26
TUBA1A-206ENST00000550254 OPRK1P41145 380 aa13.45□□□□□ -0.26
TUBA1A-206ENST00000550254 INPP1P49441 399 aa13.45□□□□□ -0.26
TUBA1A-206ENST00000550254 TNFRSF9Q07011 255 aa13.45□□□□□ -0.26
TUBA1A-206ENST00000550254 PPP1R1AQ13522 171 aa13.45□□□□□ -0.26
TUBA1A-206ENST00000550254 HAGHQ16775 308 aa13.45□□□□□ -0.26
TUBA1A-206ENST00000550254 RBPMS2Q6ZRY4 209 aaKnown RBP13.45□□□□□ -0.26
TUBA1A-206ENST00000550254 CENPSQ8N2Z9 138 aa13.45□□□□□ -0.26
TUBA1A-206ENST00000550254 SMPXQ9UHP9 88 aa13.45□□□□□ -0.26
TUBA1A-206ENST00000550254 IGHV7-4-1A0A0J9YVY3 117 aa13.44□□□□□ -0.26
TUBA1A-206ENST00000550254 LINC00854A0A1B0GVQ3 168 aa13.44□□□□□ -0.26
TUBA1A-206ENST00000550254 DUXBA0A1W2PPF3 345 aa13.44□□□□□ -0.26
TUBA1A-206ENST00000550254 CLN5O75503 358 aa13.44□□□□□ -0.26
TUBA1A-206ENST00000550254 NDUFB6O95139 128 aa13.44□□□□□ -0.26
TUBA1A-206ENST00000550254 IL7P13232 177 aa13.44□□□□□ -0.26
TUBA1A-206ENST00000550254 TOMM20LQ6UXN7 152 aa13.44□□□□□ -0.26
TUBA1A-206ENST00000550254 SLC24A4Q8NFF2 622 aa13.44□□□□□ -0.26
TUBA1A-206ENST00000550254 OR52B4Q8NGK2 314 aa13.44□□□□□ -0.26
TUBA1A-206ENST00000550254 OR4X1Q8NH49 305 aa13.44□□□□□ -0.26
TUBA1A-206ENST00000550254 RBKSQ9H477 322 aa13.44□□□□□ -0.26
TUBA1A-206ENST00000550254 ZMAT4Q9H898 229 aa13.44□□□□□ -0.26
TUBA1A-206ENST00000550254 CACFD1Q9UGQ2 172 aa13.44□□□□□ -0.26
TUBA1A-206ENST00000550254 A0A1B0GU03 582 aa13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 RBMY1BA6NDE4 496 aaKnown RBP13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 RBMY1EA6NEQ0 496 aaKnown RBP13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 CHEK1O14757 476 aa13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 TSPAN4O14817 238 aa13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 PITX3O75364 302 aa13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 RBMY1DP0C7P1 496 aaKnown RBP13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 BTCP35070 178 aa13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 ZNF600Q6ZNG1 722 aa13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 SLC16A13Q7RTY0 426 aa13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 RHPN1-AS1Q9BWJ2 59 aa13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 HIPK2Q9H2X6 1198 aa13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 SRD5A3Q9H8P0 318 aa13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 ZFAND3Q9H8U3 227 aa13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 FLVCR2Q9UPI3 526 aa13.43□□□□□ -0.26
TUBA1A-206ENST00000550254 IGHV3-49A0A0A0MS15 119 aa13.42□□□□□ -0.26
TUBA1A-206ENST00000550254 TRAV14DV4A0A0A6YYC5 116 aa13.42□□□□□ -0.26
TUBA1A-206ENST00000550254 NPY1RP25929 384 aa13.42□□□□□ -0.26
TUBA1A-206ENST00000550254 LAMTOR1Q6IAA8 161 aa13.42□□□□□ -0.26
TUBA1A-206ENST00000550254 TMEM116Q8NCL8 245 aa13.42□□□□□ -0.26
TUBA1A-206ENST00000550254 OR1S1Q8NH92 325 aa13.42□□□□□ -0.26
TUBA1A-206ENST00000550254 RNASEH2CQ8TDP1 164 aaKnown RBP13.42□□□□□ -0.26
TUBA1A-206ENST00000550254 DTD1Q8TEA8 209 aa13.42□□□□□ -0.26
TUBA1A-206ENST00000550254 RNF2Q99496 336 aa13.42□□□□□ -0.26
TUBA1A-206ENST00000550254 SPAG8Q99932 426 aaPredicted RBP13.42□□□□□ -0.26
TUBA1A-206ENST00000550254 PUS1Q9Y606 427 aaKnown RBP eCLIP13.42□□□□□ -0.26
TUBA1A-206ENST00000550254 PIGBOS1A0A0B4J2F0 54 aa13.41□□□□□ -0.26
TUBA1A-206ENST00000550254 UBE2MP61081 183 aaKnown RBP13.41□□□□□ -0.26
TUBA1A-206ENST00000550254 PRSS54Q6PEW0 395 aa13.41□□□□□ -0.26
TUBA1A-206ENST00000550254 C7orf50Q9BRJ6 194 aaKnown RBP13.41□□□□□ -0.26
TUBA1A-206ENST00000550254 IGHV3OR16-13A0A075B7E8 117 aa13.4□□□□□ -0.26
TUBA1A-206ENST00000550254 IGHV3-74A0A0B4J1X5 117 aa13.4□□□□□ -0.26
TUBA1A-206ENST00000550254 RPS10-NUDT3A0A1W2PQS6 291 aa13.4□□□□□ -0.26
TUBA1A-206ENST00000550254 C9orf170A2RU37 121 aa13.4□□□□□ -0.26
TUBA1A-206ENST00000550254 PLA2G10O15496 165 aa13.4□□□□□ -0.26
TUBA1A-206ENST00000550254 IGKV1-17P01599 117 aa13.4□□□□□ -0.26
TUBA1A-206ENST00000550254 APOHP02749 345 aaPredicted RBP13.4□□□□□ -0.26
TUBA1A-206ENST00000550254 SLC25A6P12236 298 aa13.4□□□□□ -0.26
TUBA1A-206ENST00000550254 TIGITQ495A1 244 aa13.4□□□□□ -0.26
TUBA1A-206ENST00000550254 CITED4Q96RK1 184 aa13.4□□□□□ -0.26
TUBA1A-206ENST00000550254 GINS3Q9BRX5 216 aa13.4□□□□□ -0.26
TUBA1A-206ENST00000550254 TMED3Q9Y3Q3 217 aa13.4□□□□□ -0.26
TUBA1A-206ENST00000550254 U3KQ87 197 aa13.4□□□□□ -0.26
TUBA1A-206ENST00000550254 TENM3Q9P273 2699 aa13.39□□□□□ -0.27
TUBA1A-206ENST00000550254 CENPXA8MT69 81 aa13.39□□□□□ -0.27
TUBA1A-206ENST00000550254 IFNA10P01566 189 aa13.39□□□□□ -0.27
TUBA1A-206ENST00000550254 HOXB5P09067 269 aa13.39□□□□□ -0.27
TUBA1A-206ENST00000550254 IGLC1P0CG04 106 aa13.39□□□□□ -0.27
TUBA1A-206ENST00000550254 SLC25A4P12235 298 aa13.39□□□□□ -0.27
TUBA1A-206ENST00000550254 RND2P52198 227 aa13.39□□□□□ -0.27
TUBA1A-206ENST00000550254 FAM90A2PQ658T7 463 aa13.39□□□□□ -0.27
TUBA1A-206ENST00000550254 LILRB2Q8N423 598 aa13.39□□□□□ -0.27
TUBA1A-206ENST00000550254 SPATA25Q9BR10 227 aa13.39□□□□□ -0.27
TUBA1A-206ENST00000550254 TRAV30A0A087WSZ9 112 aa13.38□□□□□ -0.27
TUBA1A-206ENST00000550254 A6NHS1 94 aa13.38□□□□□ -0.27
TUBA1A-206ENST00000550254 OR4E1P0C645 316 aa13.38□□□□□ -0.27
TUBA1A-206ENST00000550254 GGNBP1Q5YKI7 109 aa13.38□□□□□ -0.27
TUBA1A-206ENST00000550254 NOXA1Q86UR1 476 aa13.38□□□□□ -0.27
TUBA1A-206ENST00000550254 ST8SIA2Q92186 375 aa13.38□□□□□ -0.27
TUBA1A-206ENST00000550254 VSIRQ9H7M9 311 aa13.38□□□□□ -0.27
TUBA1A-206ENST00000550254 UBQLN2Q9UHD9 624 aa13.38□□□□□ -0.27
TUBA1A-206ENST00000550254 FAM90A26D6RGX4 464 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms