RNA–Protein interactions for RNA: ENST00000550146.5

TMEM106C-213, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-213ENST00000550146 SBSPONQ8IVN8 264 aa4.84□□□□□ -1.63
TMEM106C-213ENST00000550146 TMEM61Q8N0U2 210 aa4.84□□□□□ -1.63
TMEM106C-213ENST00000550146 OR52B4Q8NGK2 314 aa4.84□□□□□ -1.63
TMEM106C-213ENST00000550146 TMEM230Q96A57 120 aa4.84□□□□□ -1.63
TMEM106C-213ENST00000550146 WDR89Q96FK6 387 aaPredicted RBP4.84□□□□□ -1.63
TMEM106C-213ENST00000550146 WWC2-AS2Q96NR7 200 aa4.84□□□□□ -1.63
TMEM106C-213ENST00000550146 KRTAP4-6Q9BYQ5 205 aa4.84□□□□□ -1.63
TMEM106C-213ENST00000550146 SRRQ9GZT4 340 aa4.84□□□□□ -1.63
TMEM106C-213ENST00000550146 C19orf73Q9NVV2 129 aa4.84□□□□□ -1.63
TMEM106C-213ENST00000550146 PRR13Q9NZ81 148 aa4.84□□□□□ -1.63
TMEM106C-213ENST00000550146 MLXQ9UH92 298 aa4.84□□□□□ -1.63
TMEM106C-213ENST00000550146 SHPKQ9UHJ6 478 aa4.84□□□□□ -1.63
TMEM106C-213ENST00000550146 SELENOKQ9Y6D0 94 aa4.84□□□□□ -1.63
TMEM106C-213ENST00000550146 IGHV3OR16-8A0A075B7F1 116 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 TRAV30A0A087WSZ9 112 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 TRAV14DV4A0A0A6YYC5 116 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 A0A1B0GU03 582 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 LINC00854A0A1B0GVQ3 168 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 DUXBA0A1W2PPF3 345 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 RPS10-NUDT3A0A1W2PQS6 291 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 OR11H12B2RN74 326 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 ZNF207O43670 478 aaKnown RBP4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 NXPH3O95157 252 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 CD7P09564 240 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 OPRK1P41145 380 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 SMCO1Q147U7 214 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 RBMS2Q15434 407 aaKnown RBP4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 BAK1Q16611 211 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 PVRIGQ6DKI7 326 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 LYZL2Q7Z4W2 148 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 CENPSQ8N2Z9 138 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 DEFB125Q8N687 156 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 SLC24A4Q8NFF2 622 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 OR1S1Q8NH92 325 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 RCHY1Q96PM5 261 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 GINS3Q9BRX5 216 aa4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 HUWE1Q7Z6Z7 4374 aaKnown RBP4.83□□□□□ -1.64
TMEM106C-213ENST00000550146 STAB2Q8WWQ8 2551 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 IGHV7-4-1A0A0J9YVY3 117 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 OR4C46A6NHA9 309 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 TSPAN4O14817 238 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 CLN5O75503 358 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 TMEM50AO95807 157 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 IFNA10P01566 189 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 SLC25A4P12235 298 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 NPY1RP25929 384 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 BMI1P35226 326 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 UBE2MP61081 183 aaKnown RBP4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 TNFRSF9Q07011 255 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 HAGHQ16775 308 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 BSXQ3C1V8 233 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 C2orf83Q53S99 150 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 NMSQ5H8A3 153 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 ETFRF1Q6IPR1 90 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 TOMM20LQ6UXN7 152 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 ZNF600Q6ZNG1 722 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 TMEM116Q8NCL8 245 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 OR4X1Q8NH49 305 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 RNASEH2CQ8TDP1 164 aaKnown RBP4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 DTD1Q8TEA8 209 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 SPAG8Q99932 426 aaPredicted RBP4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 SPATA25Q9BR10 227 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 C7orf50Q9BRJ6 194 aaKnown RBP4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 TM2D3Q9BRN9 247 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 RHPN1-AS1Q9BWJ2 59 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 RBKSQ9H477 322 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 SRD5A3Q9H8P0 318 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 HSPB7Q9UBY9 170 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 SMPXQ9UHP9 88 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 TMED3Q9Y3Q3 217 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 COL7A1Q02388 2944 aa4.82□□□□□ -1.64
TMEM106C-213ENST00000550146 IGHV3-49A0A0A0MS15 119 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 CHEK1O14757 476 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 NDUFB6O95139 128 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 SFT2D2O95562 160 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 IFNA4P05014 189 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 CD5P06127 495 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 HOXB5P09067 269 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 SLC25A6P12236 298 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 IL7P13232 177 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 CMC4P56277 68 aaPredicted RBP4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 ATP5IP56385 69 aaPredicted RBP4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 PAFAH1B2P68402 229 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 PPP1R1AQ13522 171 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 MLANAQ16655 118 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 CNPY1Q3B7I2 92 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 C4orf46Q504U0 113 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 LRTM2Q8N967 370 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 NARS2Q96I59 477 aaKnown RBP4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 OR10C1Q96KK4 312 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 RNF2Q99496 336 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 FNDC4Q9H6D8 234 aaPredicted RBP4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 TMEM231Q9H6L2 316 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 PUS1Q9Y606 427 aaKnown RBP eCLIP4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 U3KQ87 197 aa4.81□□□□□ -1.64
TMEM106C-213ENST00000550146 IGKV3-7A0A075B6H7 116 aa4.8□□□□□ -1.64
TMEM106C-213ENST00000550146 IGHV3OR16-13A0A075B7E8 117 aa4.8□□□□□ -1.64
TMEM106C-213ENST00000550146 LOC102724200A0A096LPH7 203 aaPredicted RBP4.8□□□□□ -1.64
TMEM106C-213ENST00000550146 IGHV3-74A0A0B4J1X5 117 aa4.8□□□□□ -1.64
TMEM106C-213ENST00000550146 A0A1W2PS18 150 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms