RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PRSS8Q16651 343 aa15.77■□□□□ 0.12
CTDSP2-204ENST00000548823 LDLRAD2Q5SZI1 272 aa15.77■□□□□ 0.12
CTDSP2-204ENST00000548823 CCDC144NLQ6NUI1 221 aa15.77■□□□□ 0.12
CTDSP2-204ENST00000548823 NARS2Q96I59 477 aaKnown RBP15.77■□□□□ 0.12
CTDSP2-204ENST00000548823 TBX15Q96SF7 602 aa15.77■□□□□ 0.12
CTDSP2-204ENST00000548823 KCNIP2Q9NS61 270 aa15.77■□□□□ 0.12
CTDSP2-204ENST00000548823 TBL2Q9Y4P3 447 aaKnown RBP15.77■□□□□ 0.12
CTDSP2-204ENST00000548823 IGHV3-72A0A0B4J1Y9 119 aa15.76■□□□□ 0.11
CTDSP2-204ENST00000548823 IGHV1-69DA0A0B4J2H0 117 aa15.76■□□□□ 0.11
CTDSP2-204ENST00000548823 A0A0U1RQK1 487 aa15.76■□□□□ 0.11
CTDSP2-204ENST00000548823 IGHV1-69P01742 117 aa15.76■□□□□ 0.11
CTDSP2-204ENST00000548823 CFHR4Q92496 578 aa15.76■□□□□ 0.11
CTDSP2-204ENST00000548823 RITA1Q96K30 269 aa15.76■□□□□ 0.11
CTDSP2-204ENST00000548823 SIGLEC9Q9Y336 463 aa15.76■□□□□ 0.11
CTDSP2-204ENST00000548823 LSM4Q9Y4Z0 139 aaKnown RBP15.76■□□□□ 0.11
CTDSP2-204ENST00000548823 CGB1A6NKQ9 187 aa15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 AGPAT2O15120 278 aa15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 OPRK1P41145 380 aa15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 SUB1P53999 127 aaKnown RBP eCLIP15.75■□□□□ 0.113e-9■■■■□ 19.3
CTDSP2-204ENST00000548823 CACNG8Q8WXS5 425 aa15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 RCC1LQ96I51 464 aaKnown RBP15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 BIRC6Q9NR09 4857 aa15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 GPX4P36969 197 aaPredicted RBP15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 AKR1C1Q04828 323 aa15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 KLRD1Q13241 179 aa15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 PVRIGQ6DKI7 326 aa15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 ACSM6Q6P461 480 aa15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 SFT2D1Q8WV19 159 aa15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 SRSF8Q9BRL6 282 aaKnown RBP15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 VSIRQ9H7M9 311 aa15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 VPREB3Q9UKI3 123 aa15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 FAM96BQ9Y3D0 163 aa15.75■□□□□ 0.11
CTDSP2-204ENST00000548823 APOC3P02656 99 aa15.74■□□□□ 0.11
CTDSP2-204ENST00000548823 M6PRP20645 277 aa15.74■□□□□ 0.11
CTDSP2-204ENST00000548823 UBE2E1P51965 193 aa15.74■□□□□ 0.11
CTDSP2-204ENST00000548823 PRB3Q04118 309 aaPredicted RBP15.74■□□□□ 0.11
CTDSP2-204ENST00000548823 ZNF726P1Q15940 193 aa15.74■□□□□ 0.11
CTDSP2-204ENST00000548823 ACOT6Q3I5F7 207 aaPredicted RBP15.74■□□□□ 0.11
CTDSP2-204ENST00000548823 ARSJQ5FYB0 599 aaPredicted RBP15.74■□□□□ 0.11
CTDSP2-204ENST00000548823 FFAR4Q5NUL3 377 aa15.74■□□□□ 0.11
CTDSP2-204ENST00000548823 PPP1R27Q86WC6 154 aa15.74■□□□□ 0.11
CTDSP2-204ENST00000548823 ZNF114Q8NC26 417 aa15.74■□□□□ 0.11
CTDSP2-204ENST00000548823 NPBQ8NG41 125 aa15.74■□□□□ 0.11
CTDSP2-204ENST00000548823 RNASEH2CQ8TDP1 164 aaKnown RBP15.74■□□□□ 0.11
CTDSP2-204ENST00000548823 TMEM231Q9H6L2 316 aa15.74■□□□□ 0.11
CTDSP2-204ENST00000548823 CTXND1A0A1B0GTU2 59 aa15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 RBFOX3A6NFN3 312 aa15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 F8W036 122 aa15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 NDUFA3O95167 84 aa15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 ADCYAP1P18509 176 aa15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 RPL27AP46776 148 aaKnown RBP15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 CCL20P78556 96 aa15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 RAB31Q13636 194 aa15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 EBI3Q14213 229 aa15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 TEPPQ6URK8 271 aa15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 TMEM144Q7Z5S9 345 aa15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 RPP25LQ8N5L8 163 aaKnown RBP15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 OR10W1Q8NGF6 305 aa15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 ACTR3CQ9C0K3 210 aaPredicted RBP15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 EIF5A2Q9GZV4 153 aaKnown RBP15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 METTL1Q9UBP6 276 aaKnown RBP15.73■□□□□ 0.11
CTDSP2-204ENST00000548823 SMCO3A2RU48 225 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 SEC14L6B5MCN3 397 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 E7EUB6 86 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 K7EIL1 84 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 CYB5BO43169 146 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 NDUFS6O75380 124 aaKnown RBP15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 ACTL6BO94805 426 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 MOSP00540 346 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 IGKV1D-33P01593 117 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 IGKV1-33P01594 117 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 ELLP55199 621 aaPredicted RBP15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 LGALS4P56470 323 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 WT1-ASQ06250 92 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 CD69Q07108 199 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 ZNF506Q5JVG8 444 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 SVBPQ8N300 66 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 C11orf44Q8N8P7 122 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 MALSU1Q96EH3 234 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 MGST2Q99735 147 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 GGTLC1Q9BX51 225 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 TPSG1Q9NRR2 321 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 SLC39A9Q9NUM3 307 aa15.72■□□□□ 0.11
CTDSP2-204ENST00000548823 EPPK1P58107 5090 aaKnown RBP15.71■□□□□ 0.11
CTDSP2-204ENST00000548823 SFTA3P0C7M3 94 aa15.71■□□□□ 0.11
CTDSP2-204ENST00000548823 CNTFRP26992 372 aa15.71■□□□□ 0.11
CTDSP2-204ENST00000548823 RPL29P47914 159 aaKnown RBP15.71■□□□□ 0.11
CTDSP2-204ENST00000548823 KHDC3LQ587J8 217 aa15.71■□□□□ 0.11
CTDSP2-204ENST00000548823 LHFPL4Q7Z7J7 247 aa15.71■□□□□ 0.11
CTDSP2-204ENST00000548823 OR10G4Q8NGN3 311 aa15.71■□□□□ 0.11
CTDSP2-204ENST00000548823 OR10G9Q8NGN4 311 aa15.71■□□□□ 0.11
CTDSP2-204ENST00000548823 OR10G7Q8NGN6 311 aa15.71■□□□□ 0.11
CTDSP2-204ENST00000548823 OR2T10Q8NGZ9 312 aa15.71■□□□□ 0.11
CTDSP2-204ENST00000548823 IGLC7A0M8Q6 106 aa15.7■□□□□ 0.1
CTDSP2-204ENST00000548823 MAP1LC3B2A6NCE7 125 aa15.7■□□□□ 0.1
CTDSP2-204ENST00000548823 C9JQL5 133 aa15.7■□□□□ 0.1
CTDSP2-204ENST00000548823 SNRNP70P08621 437 aaKnown RBP15.7■□□□□ 0.1
CTDSP2-204ENST00000548823 TAGLN2P37802 199 aaKnown RBP15.7■□□□□ 0.1
CTDSP2-204ENST00000548823 PIP4P2Q8N4L2 257 aa15.7■□□□□ 0.1
CTDSP2-204ENST00000548823 MAP1LC3BQ9GZQ8 125 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms