RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 OR2C1O95371 312 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 NPPCP23582 126 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 UBE2E1P51965 193 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 RND2P52198 227 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 ZNF674Q2M3X9 581 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 CST9LP1Q5W188 147 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 YPEL4Q96NS1 127 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 SLC25A33Q9BSK2 321 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 NAT8Q9UHE5 227 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 POLR3KQ9Y2Y1 108 aaPredicted RBP16.66■□□□□ 0.26
RITA1-201ENST00000548278 TCRBV4S1A1TA0A5B7 111 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 MT-CO2P00403 227 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 CRYBA1P05813 215 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 HES1Q14469 280 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 Q8N6K4 173 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 TMEM37Q8WXS4 190 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 AJUBAQ96IF1 538 aa16.66■□□□□ 0.26
RITA1-201ENST00000548278 TBL2Q9Y4P3 447 aaKnown RBP16.66■□□□□ 0.26
RITA1-201ENST00000548278 PDE6DO43924 150 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 CNIH1O95406 144 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 MT-ND4LP03901 98 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 ZNF90Q03938 601 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 EBI3Q14213 229 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 FAM168AQ92567 244 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 ZNF462Q96JM2 2506 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 CORTO00230 105 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 TMEM241Q24JQ0 296 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 C5orf64Q2M2E5 130 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 FAM24BQ8N5W8 94 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 OR51G1Q8NGK1 321 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 TXNDC17Q9BRA2 123 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 PIMREGQ9BSJ6 248 aa16.65■□□□□ 0.26
RITA1-201ENST00000548278 CLN5O75503 358 aa16.64■□□□□ 0.25
RITA1-201ENST00000548278 TMEM116Q8NCL8 245 aa16.64■□□□□ 0.25
RITA1-201ENST00000548278 C10orf105Q8TEF2 133 aa16.64■□□□□ 0.25
RITA1-201ENST00000548278 TECRQ9NZ01 308 aaKnown RBP16.64■□□□□ 0.25
RITA1-201ENST00000548278 YTHDF2Q9Y5A9 579 aaKnown RBP16.64■□□□□ 0.25
RITA1-201ENST00000548278 FOLR2P14207 255 aa16.63■□□□□ 0.25
RITA1-201ENST00000548278 KIAA0141Q14154 515 aaPredicted RBP16.63■□□□□ 0.25
RITA1-201ENST00000548278 MALSU1Q96EH3 234 aa16.63■□□□□ 0.25
RITA1-201ENST00000548278 ABCA2Q9BZC7 2435 aa16.63■□□□□ 0.25
RITA1-201ENST00000548278 VWC2LB2RUY7 222 aa16.63■□□□□ 0.25
RITA1-201ENST00000548278 F6UZH7 168 aa16.63■□□□□ 0.25
RITA1-201ENST00000548278 SELENOTP62341 195 aa16.63■□□□□ 0.25
RITA1-201ENST00000548278 FXYD3Q14802 87 aa16.63■□□□□ 0.25
RITA1-201ENST00000548278 ZNF503Q96F45 646 aa16.63■□□□□ 0.25
RITA1-201ENST00000548278 LPAR2Q9HBW0 351 aa16.63■□□□□ 0.25
RITA1-201ENST00000548278 DNAJC4Q9NNZ3 241 aa16.63■□□□□ 0.25
RITA1-201ENST00000548278 IGHV4-61A0A0C4DH41 118 aa16.62■□□□□ 0.25
RITA1-201ENST00000548278 MRPL32Q9BYC8 188 aaKnown RBP16.62■□□□□ 0.25
RITA1-201ENST00000548278 TNFRSF19Q9NS68 423 aa16.62■□□□□ 0.25
RITA1-201ENST00000548278 CXorf65A6NEN9 183 aa16.61■□□□□ 0.25
RITA1-201ENST00000548278 NDUFS8O00217 210 aa16.61■□□□□ 0.25
RITA1-201ENST00000548278 ATP5J2P56134 94 aa16.61■□□□□ 0.25
RITA1-201ENST00000548278 RNF212Q495C1 297 aa16.61■□□□□ 0.25
RITA1-201ENST00000548278 RNF2Q99496 336 aa16.61■□□□□ 0.25
RITA1-201ENST00000548278 TRGV9Q99603 122 aa16.61■□□□□ 0.25
RITA1-201ENST00000548278 WNT10AQ9GZT5 417 aa16.61■□□□□ 0.25
RITA1-201ENST00000548278 MLXQ9UH92 298 aa16.61■□□□□ 0.25
RITA1-201ENST00000548278 IGHV3-21A0A0B4J1V1 117 aa16.61■□□□□ 0.25
RITA1-201ENST00000548278 ABCA1O95477 2261 aa16.61■□□□□ 0.25
RITA1-201ENST00000548278 RPL23P62829 140 aaKnown RBP16.61■□□□□ 0.25
RITA1-201ENST00000548278 PQLC2Q6ZP29 291 aa16.61■□□□□ 0.25
RITA1-201ENST00000548278 C22orf15Q8WYQ4 148 aa16.61■□□□□ 0.25
RITA1-201ENST00000548278 TMEM242Q9NWH2 141 aa16.61■□□□□ 0.25
RITA1-201ENST00000548278 I3L2K1 104 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 C8orf88P0DMB2 117 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 SAA4P35542 130 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 TAS2R45P59539 299 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 FLI1Q01543 452 aaPredicted RBP16.6■□□□□ 0.25
RITA1-201ENST00000548278 ADIRFQ15847 76 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 PATE2Q6UY27 113 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 FAM167A-AS1Q96KT0 104 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 TMEM167BQ9NRX6 74 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 SPG11Q96JI7 2443 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 NDUFB4O95168 129 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 RAB5AP20339 215 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 PAX8Q06710 450 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 SRSF1Q07955 248 aaKnown RBP eCLIP16.6■□□□□ 0.25
RITA1-201ENST00000548278 MORN5Q5VZ52 161 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 CLEC2AQ6UVW9 174 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 OR1L4Q8NGR5 311 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 OR4X1Q8NH49 305 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 PFDN5Q99471 154 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 FAM103A1Q9BTL3 118 aaKnown RBP16.6■□□□□ 0.25
RITA1-201ENST00000548278 DOK5Q9P104 306 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 ARL2-SNX15V9GYD0 113 aa16.6■□□□□ 0.25
RITA1-201ENST00000548278 NCBP2LA6PVI3 153 aaKnown RBP16.59■□□□□ 0.25
RITA1-201ENST00000548278 COX7A2P2O60397 106 aa16.59■□□□□ 0.25
RITA1-201ENST00000548278 TMEM11P17152 192 aa16.59■□□□□ 0.25
RITA1-201ENST00000548278 ZNF562Q6V9R5 426 aa16.59■□□□□ 0.25
RITA1-201ENST00000548278 SLC25A2Q9BXI2 301 aa16.59■□□□□ 0.25
RITA1-201ENST00000548278 OR7C2O60412 319 aa16.58■□□□□ 0.25
RITA1-201ENST00000548278 CX3CL1P78423 397 aa16.58■□□□□ 0.25
RITA1-201ENST00000548278 C10orf113Q5VZT2 155 aa16.58■□□□□ 0.25
RITA1-201ENST00000548278 ZNF343Q6P1L6 599 aa16.58■□□□□ 0.25
RITA1-201ENST00000548278 DERL1Q9BUN8 251 aa16.58■□□□□ 0.25
RITA1-201ENST00000548278 ELOBQ15370 118 aa16.58■□□□□ 0.24
RITA1-201ENST00000548278 FAM120AOSQ5T036 256 aa16.58■□□□□ 0.24
RITA1-201ENST00000548278 PIP4P2Q8N4L2 257 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms