RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 CPNE4Q96A23 557 aaPredicted RBP3.55□□□□□ -1.84
NPAS3-204ENST00000546849 BORCS8Q96FH0 119 aa3.55□□□□□ -1.84
NPAS3-204ENST00000546849 BTF3L4Q96K17 158 aa3.55□□□□□ -1.84
NPAS3-204ENST00000546849 C2orf50Q96LR7 162 aa3.55□□□□□ -1.84
NPAS3-204ENST00000546849 TSNAXQ99598 290 aaKnown RBP3.55□□□□□ -1.84
NPAS3-204ENST00000546849 FOXC2Q99958 501 aa3.55□□□□□ -1.84
NPAS3-204ENST00000546849 SULT4A1Q9BR01 284 aa3.55□□□□□ -1.84
NPAS3-204ENST00000546849 TTTY10Q9BZA0 68 aa3.55□□□□□ -1.84
NPAS3-204ENST00000546849 ULBP2Q9BZM5 246 aa3.55□□□□□ -1.84
NPAS3-204ENST00000546849 SLC25A31Q9H0C2 315 aa3.55□□□□□ -1.84
NPAS3-204ENST00000546849 ZNF286AQ9HBT8 521 aa3.55□□□□□ -1.84
NPAS3-204ENST00000546849 PLEKHJ1Q9NW61 149 aa3.55□□□□□ -1.84
NPAS3-204ENST00000546849 TAS2R4Q9NYW5 299 aa3.55□□□□□ -1.84
NPAS3-204ENST00000546849 MYEF2Q9P2K5 600 aaKnown RBP3.55□□□□□ -1.84
NPAS3-204ENST00000546849 SNRNP200O75643 2136 aaKnown RBP3.55□□□□□ -1.84
NPAS3-204ENST00000546849 IGHV1-69DA0A0B4J2H0 117 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 C9orf170A2RU37 121 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 A6NIN4 97 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 C10orf142B7Z368 130 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 UMAD1C9J7I0 102 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 H7C1H1 209 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 K7EPK0 472 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 PIN1P1O15428 100 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 TGOLN2O43493 480 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 GMDSO60547 372 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 SFT2D2O95562 160 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 GLAP06280 429 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 PGA3P0DJD8 388 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 HIST1H1DP16402 221 aaKnown RBP3.54□□□□□ -1.84
NPAS3-204ENST00000546849 CTLA4P16410 223 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 AKR1C4P17516 323 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 CXCL3P19876 107 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 PTNP21246 168 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 CCL1P22362 96 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 TUBG1P23258 451 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 RFC3P40938 356 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 GFERP55789 205 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 CLDN6P56747 220 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 CLDN12P56749 244 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 RPL23P62829 140 aaKnown RBP3.54□□□□□ -1.84
NPAS3-204ENST00000546849 RPL19P84098 196 aaKnown RBP3.54□□□□□ -1.84
NPAS3-204ENST00000546849 FLI1Q01543 452 aaPredicted RBP3.54□□□□□ -1.84
NPAS3-204ENST00000546849 MOBPQ13875 183 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 INSL4Q14641 139 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 RBMY1FQ15415 496 aaKnown RBP3.54□□□□□ -1.84
NPAS3-204ENST00000546849 PLPPR5Q32ZL2 321 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 C10orf128Q5T292 105 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 STUMQ69YW2 141 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 PRSS54Q6PEW0 395 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 GLIPR1L1Q6UWM5 242 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 HIST2H3AQ71DI3 136 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 SLC36A1Q7Z2H8 476 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 UBAC2Q8NBM4 344 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 PPP1R1CQ8WVI7 109 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 C11orf40Q8WZ69 217 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 TSLPQ969D9 159 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 TCEAL2Q9H3H9 227 aaPredicted RBP3.54□□□□□ -1.84
NPAS3-204ENST00000546849 TUBG2Q9NRH3 451 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 FAM206AQ9NX38 181 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 DHCR7Q9UBM7 475 aaKnown RBP3.54□□□□□ -1.84
NPAS3-204ENST00000546849 MCTS1Q9ULC4 181 aaKnown RBP3.54□□□□□ -1.84
NPAS3-204ENST00000546849 TNFSF18Q9UNG2 199 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 KPTNQ9Y664 436 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 CELSR3Q9NYQ7 3312 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 ABCA2Q9BZC7 2435 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 TMEM131Q92545 1883 aa3.54□□□□□ -1.84
NPAS3-204ENST00000546849 ATG2BQ96BY7 2078 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 PTPRQQ9UMZ3 2332 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 TRAV8-7A0A075B6U6 113 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 TRAV25A0A0B4J276 109 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 TMEM235A6NFC5 223 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 COLCA2A8K830 154 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 ZNF850A8MQ14 1090 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 CEACAM18A8MTB9 384 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 TMEM14DPA8MWL7 114 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 NDUFC2-KCTD14E9PQ53 114 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 SMLR1H3BR10 107 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 H7C1C5 153 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 M0R135 149 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 SGCEO43556 437 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 MPC2O95563 127 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 CST4P01036 141 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 APOC3P02656 99 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 CLPSP04118 112 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 CRHP06850 196 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 CTSDP07339 412 aaPredicted RBP3.53□□□□□ -1.84
NPAS3-204ENST00000546849 CST2P09228 141 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 PGA4P0DJD7 388 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 COX5BP10606 129 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 RAB4AP20338 218 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 BLVRBP30043 206 aaPredicted RBP3.53□□□□□ -1.84
NPAS3-204ENST00000546849 ARR3P36575 388 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 KIR3DL2P43630 455 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 CARD18P57730 90 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 ZNF121P58317 390 aaPredicted RBP3.53□□□□□ -1.84
NPAS3-204ENST00000546849 RAB5BP61020 215 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 POLR2GP62487 172 aaKnown RBP eCLIP3.53□□□□□ -1.84
NPAS3-204ENST00000546849 DEFA5Q01523 94 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 FOXF1Q12946 379 aa3.53□□□□□ -1.84
NPAS3-204ENST00000546849 COTL1Q14019 142 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms