RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 KIR2DL5AQ8N109 375 aa10.71□□□□□ -0.69
PTCH1-212ENST00000546744 TMEM171Q8WVE6 324 aa10.71□□□□□ -0.69
PTCH1-212ENST00000546744 UPK2O00526 184 aa10.71□□□□□ -0.69
PTCH1-212ENST00000546744 GPR6P46095 362 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-212ENST00000546744 PRCDQ00LT1 54 aa10.71□□□□□ -0.69
PTCH1-212ENST00000546744 SHISA5Q8N114 240 aa10.71□□□□□ -0.69
PTCH1-212ENST00000546744 C1orf162Q8NEQ5 155 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-212ENST00000546744 TCRBV4S1A1TA0A5B7 111 aa10.71□□□□□ -0.7
PTCH1-212ENST00000546744 NPSP0C0P6 89 aa10.71□□□□□ -0.7
PTCH1-212ENST00000546744 PRSS8Q16651 343 aa10.71□□□□□ -0.7
PTCH1-212ENST00000546744 BCL6BQ8N143 479 aaPredicted RBP10.71□□□□□ -0.7
PTCH1-212ENST00000546744 GFRA4Q9GZZ7 299 aa10.71□□□□□ -0.7
PTCH1-212ENST00000546744 DUSP15Q9H1R2 295 aaPredicted RBP10.71□□□□□ -0.7
PTCH1-212ENST00000546744 PRR33A8MZF0 331 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 KLF17Q5JT82 389 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-212ENST00000546744 EBLN2Q6P2I7 272 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 TREML4Q6UXN2 200 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 ZNF441Q8N8Z8 693 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 MGST2Q99735 147 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 CACNA1DQ01668 2161 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 PLNP26678 52 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 KIR3DS1Q14943 382 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 FADS6Q8N9I5 356 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 MRAP2Q96G30 205 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 CT83Q5H943 113 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 OR13C6PQ8NH95 151 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 PILRBQ9UKJ0 227 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 CDX4O14627 284 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-212ENST00000546744 LEPP41159 167 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 TM4SF20Q53R12 229 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 GTSF1LQ9H1H1 148 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 VSIRQ9H7M9 311 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 RNF115Q9Y4L5 304 aa10.7□□□□□ -0.7
PTCH1-212ENST00000546744 MTCL1Q9Y4B5 1905 aaKnown RBP10.69□□□□□ -0.7
PTCH1-212ENST00000546744 IGKV1D-8A0A087WSZ0 117 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 FAM157AC9JC47 383 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 GFRALQ6UXV0 394 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 ZNF48Q96MX3 618 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-212ENST00000546744 CCL13Q99616 98 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 NOTCH4Q99466 2003 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 IGHV3OR15-7A0A075B7D8 119 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 TRAV24A0A0B4J272 114 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 IGHV2OR16-5A0A0B4J2B6 119 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 LTBRP36941 435 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 ITLN1Q8WWA0 313 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 SLC50A1Q9BRV3 221 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 SPTA1P02549 2419 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 F8W1H4 67 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 FAM106CPP0CH98 169 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 DEFB109BQ30KR1 87 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 DEFB123Q8N688 67 aa10.69□□□□□ -0.7
PTCH1-212ENST00000546744 SMAD7O15105 426 aaKnown RBP10.68□□□□□ -0.7
PTCH1-212ENST00000546744 MOSP00540 346 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 ASIPP42127 132 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 REG1BP48304 166 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 GUSBP1Q15486 140 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 C1orf185Q5T7R7 199 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 TIMP4Q99727 224 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 TRBV20-1A0A075B6N2 111 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 MUC21A0A0G2JKD1 596 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 MUC21A0A140T8X8 626 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 C9orf118A6NHY6 69 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 C16orf97H3BN30 126 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 LHX2P50458 406 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 MUC21Q5SSG8 566 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 ZNF826PQ6ZT77 177 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 COLQQ9Y215 455 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-212ENST00000546744 FREM3P0C091 2139 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 IGHV2-26A0A0B4J1V2 119 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 IQCF6A8MYZ5 107 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 MYF5P13349 255 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 CRXO43186 299 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-212ENST00000546744 PAX1P15863 534 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 CRYGSP22914 178 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 ATXN8Q156A1 80 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 VKORC1L1Q8N0U8 176 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 KIR3DL3Q8N743 410 aa10.68□□□□□ -0.7
PTCH1-212ENST00000546744 SPINK8P0C7L1 97 aa10.67□□□□□ -0.7
PTCH1-212ENST00000546744 KHDC1LQ5JSQ8 128 aa10.67□□□□□ -0.7
PTCH1-212ENST00000546744 MEIG1Q5JSS6 88 aa10.67□□□□□ -0.7
PTCH1-212ENST00000546744 SRXN1Q9BYN0 137 aa10.67□□□□□ -0.7
PTCH1-212ENST00000546744 NPPCP23582 126 aa10.67□□□□□ -0.7
PTCH1-212ENST00000546744 WBP1Q96G27 269 aa10.67□□□□□ -0.7
PTCH1-212ENST00000546744 CLEC7AQ9BXN2 247 aa10.67□□□□□ -0.7
PTCH1-212ENST00000546744 ERG28Q9UKR5 140 aa10.67□□□□□ -0.7
PTCH1-212ENST00000546744 FOXA2Q9Y261 457 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-212ENST00000546744 BOD1L2Q8IYS8 172 aa10.67□□□□□ -0.7
PTCH1-212ENST00000546744 LYZL4Q96KX0 146 aa10.67□□□□□ -0.7
PTCH1-212ENST00000546744 ATP6V0BQ99437 205 aa10.67□□□□□ -0.7
PTCH1-212ENST00000546744 BEX4Q9NWD9 120 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-212ENST00000546744 TMEM238C9JI98 176 aa10.66□□□□□ -0.7
PTCH1-212ENST00000546744 DUTP33316 252 aaKnown RBP10.66□□□□□ -0.7
PTCH1-212ENST00000546744 PCOLCEQ15113 449 aa10.66□□□□□ -0.7
PTCH1-212ENST00000546744 ASCL4Q6XD76 172 aa10.66□□□□□ -0.7
PTCH1-212ENST00000546744 SLC22A18ASQ8N1D0 253 aa10.66□□□□□ -0.7
PTCH1-212ENST00000546744 KLK15Q9H2R5 256 aa10.66□□□□□ -0.7
PTCH1-212ENST00000546744 PSG8Q9UQ74 426 aa10.66□□□□□ -0.7
PTCH1-212ENST00000546744 K7EP13 123 aa10.66□□□□□ -0.7
PTCH1-212ENST00000546744 GLRXP35754 106 aa10.66□□□□□ -0.7
PTCH1-212ENST00000546744 TMEM42Q69YG0 159 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms