RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 DEDD2Q8WXF8 326 aa12.65□□□□□ -0.38
HOXD8-204ENST00000544999 HIPK2Q9H2X6 1198 aa12.65□□□□□ -0.38
HOXD8-204ENST00000544999 EDA2RQ9HAV5 297 aa12.65□□□□□ -0.38
HOXD8-204ENST00000544999 CACFD1Q9UGQ2 172 aa12.65□□□□□ -0.38
HOXD8-204ENST00000544999 CHEK1O14757 476 aa12.64□□□□□ -0.39
HOXD8-204ENST00000544999 TMEM50AO95807 157 aa12.64□□□□□ -0.39
HOXD8-204ENST00000544999 ANXA3P12429 323 aa12.64□□□□□ -0.39
HOXD8-204ENST00000544999 AKR1C4P17516 323 aa12.64□□□□□ -0.39
HOXD8-204ENST00000544999 OPRK1P41145 380 aa12.64□□□□□ -0.39
HOXD8-204ENST00000544999 HTR2BP41595 481 aa12.64□□□□□ -0.39
HOXD8-204ENST00000544999 SUPT4H1P63272 117 aaKnown RBP12.64□□□□□ -0.39
HOXD8-204ENST00000544999 ZNF600Q6ZNG1 722 aa12.64□□□□□ -0.39
HOXD8-204ENST00000544999 TMEM116Q8NCL8 245 aa12.64□□□□□ -0.39
HOXD8-204ENST00000544999 GINS3Q9BRX5 216 aa12.64□□□□□ -0.39
HOXD8-204ENST00000544999 FNDC4Q9H6D8 234 aaPredicted RBP12.64□□□□□ -0.39
HOXD8-204ENST00000544999 TRAV14DV4A0A0A6YYC5 116 aa12.63□□□□□ -0.39
HOXD8-204ENST00000544999 A0A0B4J2A0 478 aa12.63□□□□□ -0.39
HOXD8-204ENST00000544999 SULT1A3P0DMM9 295 aa12.63□□□□□ -0.39
HOXD8-204ENST00000544999 SULT1A4P0DMN0 295 aa12.63□□□□□ -0.39
HOXD8-204ENST00000544999 SRPXP78539 464 aa12.63□□□□□ -0.39
HOXD8-204ENST00000544999 LGI3Q8N145 548 aa12.63□□□□□ -0.39
HOXD8-204ENST00000544999 RHPN1-AS1Q9BWJ2 59 aa12.63□□□□□ -0.39
HOXD8-204ENST00000544999 HEYLQ9NQ87 328 aaPredicted RBP12.63□□□□□ -0.39
HOXD8-204ENST00000544999 PRR13Q9NZ81 148 aa12.63□□□□□ -0.39
HOXD8-204ENST00000544999 SHPKQ9UHJ6 478 aa12.63□□□□□ -0.39
HOXD8-204ENST00000544999 LOC102724200A0A096LPH7 203 aaPredicted RBP12.62□□□□□ -0.39
HOXD8-204ENST00000544999 PIGBOS1A0A0B4J2F0 54 aa12.62□□□□□ -0.39
HOXD8-204ENST00000544999 RPS10-NUDT3A0A1W2PQS6 291 aa12.62□□□□□ -0.39
HOXD8-204ENST00000544999 OR4C46A6NHA9 309 aa12.62□□□□□ -0.39
HOXD8-204ENST00000544999 CEBPZOSA8MTT3 80 aa12.62□□□□□ -0.39
HOXD8-204ENST00000544999 CLN5O75503 358 aa12.62□□□□□ -0.39
HOXD8-204ENST00000544999 SCGB2A1O75556 95 aa12.62□□□□□ -0.39
HOXD8-204ENST00000544999 CCR6P51684 374 aa12.62□□□□□ -0.39
HOXD8-204ENST00000544999 C2orf83Q53S99 150 aa12.62□□□□□ -0.39
HOXD8-204ENST00000544999 TOMM20LQ6UXN7 152 aa12.62□□□□□ -0.39
HOXD8-204ENST00000544999 OR4X1Q8NH49 305 aa12.62□□□□□ -0.39
HOXD8-204ENST00000544999 RNF2Q99496 336 aa12.62□□□□□ -0.39
HOXD8-204ENST00000544999 GGTLC1Q9BX51 225 aa12.62□□□□□ -0.39
HOXD8-204ENST00000544999 RETNQ9HD89 108 aa12.62□□□□□ -0.39
HOXD8-204ENST00000544999 BMI1P35226 326 aa12.61□□□□□ -0.39
HOXD8-204ENST00000544999 SMCO1Q147U7 214 aa12.61□□□□□ -0.39
HOXD8-204ENST00000544999 MLANAQ16655 118 aa12.61□□□□□ -0.39
HOXD8-204ENST00000544999 NMSQ5H8A3 153 aa12.61□□□□□ -0.39
HOXD8-204ENST00000544999 SPANXN2Q5MJ10 180 aa12.61□□□□□ -0.39
HOXD8-204ENST00000544999 CASC10Q5T4H9 136 aa12.61□□□□□ -0.39
HOXD8-204ENST00000544999 SLC24A4Q8NFF2 622 aa12.61□□□□□ -0.39
HOXD8-204ENST00000544999 FAM110AQ9BQ89 295 aa12.61□□□□□ -0.39
HOXD8-204ENST00000544999 SLC25A21Q9BQT8 299 aaPredicted RBP12.61□□□□□ -0.39
HOXD8-204ENST00000544999 ZFAND3Q9H8U3 227 aa12.61□□□□□ -0.39
HOXD8-204ENST00000544999 MRPL36Q9P0J6 103 aaKnown RBP12.61□□□□□ -0.39
HOXD8-204ENST00000544999 UBQLN2Q9UHD9 624 aa12.61□□□□□ -0.39
HOXD8-204ENST00000544999 PUS1Q9Y606 427 aaKnown RBP eCLIP12.61□□□□□ -0.39
HOXD8-204ENST00000544999 STAB2Q8WWQ8 2551 aa12.61□□□□□ -0.39
HOXD8-204ENST00000544999 IGHV3-49A0A0A0MS15 119 aa12.6□□□□□ -0.39
HOXD8-204ENST00000544999 DUXBA0A1W2PPF3 345 aa12.6□□□□□ -0.39
HOXD8-204ENST00000544999 LYL1P12980 280 aa12.6□□□□□ -0.39
HOXD8-204ENST00000544999 TMEM128Q5BJH2 165 aa12.6□□□□□ -0.39
HOXD8-204ENST00000544999 LYZL2Q7Z4W2 148 aa12.6□□□□□ -0.39
HOXD8-204ENST00000544999 TMED4Q7Z7H5 227 aa12.6□□□□□ -0.39
HOXD8-204ENST00000544999 RNASEH2CQ8TDP1 164 aaKnown RBP12.6□□□□□ -0.39
HOXD8-204ENST00000544999 SRRQ9GZT4 340 aa12.6□□□□□ -0.39
HOXD8-204ENST00000544999 DNAH7Q8WXX0 4024 aa12.59□□□□□ -0.39
HOXD8-204ENST00000544999 TRAV30A0A087WSZ9 112 aa12.59□□□□□ -0.39
HOXD8-204ENST00000544999 NXPH3O95157 252 aa12.59□□□□□ -0.39
HOXD8-204ENST00000544999 CD5P06127 495 aa12.59□□□□□ -0.39
HOXD8-204ENST00000544999 SLC25A4P12235 298 aa12.59□□□□□ -0.39
HOXD8-204ENST00000544999 TNFRSF9Q07011 255 aa12.59□□□□□ -0.39
HOXD8-204ENST00000544999 ODF3L2Q3SX64 289 aa12.59□□□□□ -0.39
HOXD8-204ENST00000544999 FAM90A2PQ658T7 463 aa12.59□□□□□ -0.39
HOXD8-204ENST00000544999 NOXA1Q86UR1 476 aa12.59□□□□□ -0.39
HOXD8-204ENST00000544999 VSIRQ9H7M9 311 aa12.59□□□□□ -0.39
HOXD8-204ENST00000544999 HSPB7Q9UBY9 170 aa12.59□□□□□ -0.39
HOXD8-204ENST00000544999 A0A1B0GU03 582 aa12.58□□□□□ -0.4
HOXD8-204ENST00000544999 NPY1RP25929 384 aa12.58□□□□□ -0.4
HOXD8-204ENST00000544999 CMC4P56277 68 aaPredicted RBP12.58□□□□□ -0.4
HOXD8-204ENST00000544999 ETFRF1Q6IPR1 90 aa12.58□□□□□ -0.4
HOXD8-204ENST00000544999 TMEM170AQ8WVE7 144 aa12.58□□□□□ -0.4
HOXD8-204ENST00000544999 TENM3Q9P273 2699 aa12.58□□□□□ -0.4
HOXD8-204ENST00000544999 IGHV3OR16-13A0A075B7E8 117 aa12.57□□□□□ -0.4
HOXD8-204ENST00000544999 IGHV3-74A0A0B4J1X5 117 aa12.57□□□□□ -0.4
HOXD8-204ENST00000544999 IGKV1-17P01599 117 aa12.57□□□□□ -0.4
HOXD8-204ENST00000544999 PRSS54Q6PEW0 395 aa12.57□□□□□ -0.4
HOXD8-204ENST00000544999 TCF24Q7RTU0 167 aa12.57□□□□□ -0.4
HOXD8-204ENST00000544999 LRTM2Q8N967 370 aa12.57□□□□□ -0.4
HOXD8-204ENST00000544999 OR1S2Q8NGQ3 325 aa12.57□□□□□ -0.4
HOXD8-204ENST00000544999 DTD1Q8TEA8 209 aa12.57□□□□□ -0.4
HOXD8-204ENST00000544999 ST8SIA2Q92186 375 aa12.57□□□□□ -0.4
HOXD8-204ENST00000544999 RBKSQ9H477 322 aa12.57□□□□□ -0.4
HOXD8-204ENST00000544999 TMEM231Q9H6L2 316 aa12.57□□□□□ -0.4
HOXD8-204ENST00000544999 U3KQ87 197 aa12.57□□□□□ -0.4
HOXD8-204ENST00000544999 KMT2CQ8NEZ4 4911 aaKnown RBP12.57□□□□□ -0.4
HOXD8-204ENST00000544999 SFT2D2O95562 160 aa12.56□□□□□ -0.4
HOXD8-204ENST00000544999 IFNA10P01566 189 aa12.56□□□□□ -0.4
HOXD8-204ENST00000544999 APOHP02749 345 aaPredicted RBP12.56□□□□□ -0.4
HOXD8-204ENST00000544999 IGLC1P0CG04 106 aa12.56□□□□□ -0.4
HOXD8-204ENST00000544999 NPPCP23582 126 aa12.56□□□□□ -0.4
HOXD8-204ENST00000544999 VAMP1P23763 118 aa12.56□□□□□ -0.4
HOXD8-204ENST00000544999 INPP1P49441 399 aa12.56□□□□□ -0.4
HOXD8-204ENST00000544999 RND2P52198 227 aa12.56□□□□□ -0.4
HOXD8-204ENST00000544999 APOC4P55056 127 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms