RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 MFAP2P55001 183 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 MFAP4P55083 255 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 SRPXP78539 464 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 PMS2P11Q13670 270 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 KLF9Q13886 244 aaPredicted RBP5.59□□□□□ -1.51
CPSF7-224ENST00000544990 Q56UQ5 140 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 TMEM268Q5VZI3 342 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 GTSCR1Q86UQ5 136 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 HAPLN4Q86UW8 402 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 SELENOHQ8IZQ5 122 aaKnown RBP5.59□□□□□ -1.51
CPSF7-224ENST00000544990 UBAC2Q8NBM4 344 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 OR52E5Q8NH55 327 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 IL22RA2Q969J5 263 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 MARC2Q969Z3 335 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 TXN2Q99757 166 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 SLC25A21Q9BQT8 299 aaPredicted RBP5.59□□□□□ -1.51
CPSF7-224ENST00000544990 ZC4H2Q9NQZ6 224 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 UFC1Q9Y3C8 167 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 TMEM56-RWDD3S4R434 201 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 IGHV3-21A0A0B4J1V1 117 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 A0A0G2JRQ6 117 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 GAGE12BA1L429 117 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 GAGE12HA6NDE8 117 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 NAP1L6A6NFF2 107 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 OR2T8A6NH00 312 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 A8MWP6 167 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 K7EIM0 57 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 NUPL2O15504 423 aaKnown RBP5.58□□□□□ -1.52
CPSF7-224ENST00000544990 MT-CO2P00403 227 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 CBLN1P23435 193 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 ELLP55199 621 aaPredicted RBP5.58□□□□□ -1.52
CPSF7-224ENST00000544990 SPCS3P61009 180 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 RELQ04864 619 aaPredicted RBP5.58□□□□□ -1.52
CPSF7-224ENST00000544990 TMEM187Q14656 261 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 ICAM4Q14773 271 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 DEFB114Q30KQ6 69 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 CD300EQ496F6 205 aaPredicted RBP5.58□□□□□ -1.52
CPSF7-224ENST00000544990 TMEM128Q5BJH2 165 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 SPINK9Q5DT21 86 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 TRIQKQ629K1 86 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 LGI3Q8N145 548 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 DUSP18Q8NEJ0 188 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 LHFPL5Q8TAF8 219 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 TMEM230Q96A57 120 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 PINX1Q96BK5 328 aaKnown RBP5.58□□□□□ -1.52
CPSF7-224ENST00000544990 GPR146Q96CH1 333 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 ZNF436Q9C0F3 470 aaPredicted RBP5.58□□□□□ -1.52
CPSF7-224ENST00000544990 SRRQ9GZT4 340 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 MRPL27Q9P0M9 148 aaKnown RBP5.58□□□□□ -1.52
CPSF7-224ENST00000544990 CACNG5Q9UF02 275 aa5.58□□□□□ -1.52
CPSF7-224ENST00000544990 A0A0B4J2A0 478 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 IGHV3-35A0A0C4DH35 117 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 TMEM213A2RRL7 107 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 CENPXA8MT69 81 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 CEBPZOSA8MTT3 80 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 I3L2K1 104 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 NDUFA4O00483 81 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 TRIAP1O43715 76 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 GNG7O60262 68 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 SCGB2A1O75556 95 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 SULT1A3P0DMM9 295 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 SULT1A4P0DMN0 295 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 HOXA5P20719 270 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 FCGR2BP31994 310 aaPredicted RBP5.57□□□□□ -1.52
CPSF7-224ENST00000544990 HTR2BP41595 481 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 NPBWR1P48145 328 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 CCR6P51684 374 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 SUPT4H1P63272 117 aaKnown RBP5.57□□□□□ -1.52
CPSF7-224ENST00000544990 RBMS2Q15434 407 aaKnown RBP5.57□□□□□ -1.52
CPSF7-224ENST00000544990 GUCA2BQ16661 112 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 AARDQ4LEZ3 155 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 ADAMTSL5Q6ZMM2 481 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 TMED4Q7Z7H5 227 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 NOXA1Q86UR1 476 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 UXS1Q8NBZ7 420 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 HIPK2Q9H2X6 1198 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 HEYLQ9NQ87 328 aaPredicted RBP5.57□□□□□ -1.52
CPSF7-224ENST00000544990 SHPKQ9UHJ6 478 aa5.57□□□□□ -1.52
CPSF7-224ENST00000544990 TRAV25A0A0B4J276 109 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 DUXBA0A1W2PPF3 345 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 RPS10-NUDT3A0A1W2PQS6 291 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 IZUMO1RA6ND01 250 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 A8MZ25 164 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 F5H697 171 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 K7EMT4 169 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 YIF1AO95070 293 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 CTSGP08311 255 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 FRMD6-AS1P0C7T7 363 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 C8orf88P0DMB2 117 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 IGHV4-30-4P0DP06 118 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 RNASE2P10153 161 aaKnown RBP5.56□□□□□ -1.52
CPSF7-224ENST00000544990 BTF3P20290 206 aaKnown RBP5.56□□□□□ -1.52
CPSF7-224ENST00000544990 OPRK1P41145 380 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 UBE2MP61081 183 aaKnown RBP5.56□□□□□ -1.52
CPSF7-224ENST00000544990 SMCO1Q147U7 214 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 BAK1Q16611 211 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 ANKRD55Q3KP44 614 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 LAMTOR1Q6IAA8 161 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 UNQ9165/PRO28630Q6UXU0 137 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms