RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 MDFIC2A0A1B0GVS7 189 aa11.2□□□□□ -0.62
MSH2-206ENST00000543555 TYMSP04818 313 aa11.2□□□□□ -0.62
MSH2-206ENST00000543555 S100A2P29034 98 aa11.2□□□□□ -0.62
MSH2-206ENST00000543555 TAS2R45P59539 299 aa11.2□□□□□ -0.62
MSH2-206ENST00000543555 PQLC2Q6ZP29 291 aa11.2□□□□□ -0.62
MSH2-206ENST00000543555 TMEM37Q8WXS4 190 aa11.2□□□□□ -0.62
MSH2-206ENST00000543555 CLEC7AQ9BXN2 247 aa11.2□□□□□ -0.62
MSH2-206ENST00000543555 PRB3Q04118 309 aaPredicted RBP11.19□□□□□ -0.62
MSH2-206ENST00000543555 TEX45Q8NA69 505 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 OCC1Q8TAD7 63 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 IMMP2LQ96T52 175 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 CSMD1Q96PZ7 3565 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 CELSR2Q9HCU4 2923 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 PPIAL4CA0A0B4J2A2 164 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 PSMB11A5LHX3 300 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 OR7C2O60412 319 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 RBP4P02753 201 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 PPIAL4GP0DN37 164 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 LCN2P80188 198 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 SSBP2P81877 361 aaPredicted RBP11.19□□□□□ -0.62
MSH2-206ENST00000543555 GPR61Q9BZJ8 451 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 CHODLQ9H9P2 273 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 BUB1B-PAK6H3BSN5 160 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 C8orf88P0DMB2 117 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 PDZD11Q5EBL8 140 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 BEND2Q8NDZ0 799 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 SLC25A33Q9BSK2 321 aa11.19□□□□□ -0.62
MSH2-206ENST00000543555 MRPL32Q9BYC8 188 aaKnown RBP11.19□□□□□ -0.62
MSH2-206ENST00000543555 IGHV1-3A0A0C4DH29 117 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 C9JCJ5 164 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 PRSS8Q16651 343 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 MMD2Q8IY49 270 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 C8orf46Q8TAG6 207 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 NPIPB3Q92617 1050 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 PITPNC1Q9UKF7 332 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 INSIG2Q9Y5U4 225 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 IGLC7A0M8Q6 106 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 REG1AP05451 166 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 CRYGBP07316 175 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 HNF1AP20823 631 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 FOXL1Q12952 345 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 TEX38Q6PEX7 206 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 OR8B3Q8NGG8 313 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 OR8B2Q96RD0 313 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 RNF2Q99496 336 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 TENM4Q6N022 2769 aa11.18□□□□□ -0.62
MSH2-206ENST00000543555 HELZ2Q9BYK8 2649 aaKnown RBP11.17□□□□□ -0.62
MSH2-206ENST00000543555 COX7A1P24310 79 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 CNTFRP26992 372 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 ZNF843Q8N446 348 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 LY96Q9Y6Y9 160 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 IGKV1D-37A0A075B6S9 117 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 IGHV3-48P01763 117 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 RNF224P0DH78 156 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 ACTL10Q5JWF8 245 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 MRPL41Q8IXM3 137 aaKnown RBP11.17□□□□□ -0.62
MSH2-206ENST00000543555 THAP8Q8NA92 274 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 OR10G8Q8NGN5 311 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 DNAJC4Q9NNZ3 241 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 MRPL36Q9P0J6 103 aaKnown RBP11.17□□□□□ -0.62
MSH2-206ENST00000543555 TCRBV4S1A1TA0A5B7 111 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 K7EN84 100 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 OR10J4P0C629 311 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 RPL27AP46776 148 aaKnown RBP11.17□□□□□ -0.62
MSH2-206ENST00000543555 TNXAQ16473 311 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 MORN5Q5VZ52 161 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 EAF1Q96JC9 268 aaPredicted RBP11.17□□□□□ -0.62
MSH2-206ENST00000543555 BTF3L4Q96K17 158 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 FAM167A-AS1Q96KT0 104 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 RAB1BQ9H0U4 201 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 MIOXQ9UGB7 285 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 SIGLEC9Q9Y336 463 aa11.17□□□□□ -0.62
MSH2-206ENST00000543555 PYY3Q5JQD4 70 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 OR10D4PQ8NGN7 298 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 SGMS2Q8NHU3 365 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 SLC25A2Q9BXI2 301 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 AMMECR1Q9Y4X0 333 aaPredicted RBP11.16□□□□□ -0.62
MSH2-206ENST00000543555 GGTLC3B5MD39 225 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 LY6HO94772 140 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 CRYBB3P26998 211 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 ZNF90Q03938 601 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 PVRIGQ6DKI7 326 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 LY6G5BQ8NDX9 201 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 RPEQ96AT9 228 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 PFDN5Q99471 154 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 OR51M1Q9H341 326 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 GSN-AS1Q9NRJ2 163 aa11.16□□□□□ -0.62
MSH2-206ENST00000543555 TRAV5A0A0B4J249 113 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 A0A1W2PRE2 83 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 COX7A2P2O60397 106 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 FABP1P07148 127 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 SELENOTP62341 195 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 HCP5Q6MZN7 132 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 TMEM183AQ8IXX5 376 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 OR1L4Q8NGR5 311 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 FASNP49327 2511 aaKnown RBP11.15□□□□□ -0.62
MSH2-206ENST00000543555 A0A0U1RQK1 487 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 ZNF320A2RRD8 509 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 HELTA6NFD8 242 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 LIPFP07098 398 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms