RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 EXTL2Q9UBQ6 330 aa14.34□□□□□ -0.11
CACNA1C-230ENST00000543114 MTFP1Q9UDX5 166 aa14.34□□□□□ -0.11
CACNA1C-230ENST00000543114 FBXL17Q9UF56 701 aa14.34□□□□□ -0.11
CACNA1C-230ENST00000543114 CORTO00230 105 aa14.33□□□□□ -0.12
CACNA1C-230ENST00000543114 TBPP20226 339 aa14.33□□□□□ -0.12
CACNA1C-230ENST00000543114 OPRK1P41145 380 aa14.33□□□□□ -0.12
CACNA1C-230ENST00000543114 RBMS2Q15434 407 aaKnown RBP14.33□□□□□ -0.12
CACNA1C-230ENST00000543114 LGALS9CQ6DKI2 356 aa14.33□□□□□ -0.12
CACNA1C-230ENST00000543114 MZT2AQ6P582 158 aa14.33□□□□□ -0.12
CACNA1C-230ENST00000543114 OR13C8Q8NGS7 320 aa14.33□□□□□ -0.12
CACNA1C-230ENST00000543114 MFFQ9GZY8 342 aa14.33□□□□□ -0.12
CACNA1C-230ENST00000543114 COPZ2Q9P299 210 aa14.33□□□□□ -0.12
CACNA1C-230ENST00000543114 RABAC1Q9UI14 185 aa14.33□□□□□ -0.12
CACNA1C-230ENST00000543114 HECTD4Q9Y4D8 3996 aa14.32□□□□□ -0.12
CACNA1C-230ENST00000543114 CLN5O75503 358 aa14.32□□□□□ -0.12
CACNA1C-230ENST00000543114 ATG12O94817 140 aa14.32□□□□□ -0.12
CACNA1C-230ENST00000543114 UCP1P25874 307 aa14.32□□□□□ -0.12
CACNA1C-230ENST00000543114 SUB1P53999 127 aaKnown RBP eCLIP14.32□□□□□ -0.12
CACNA1C-230ENST00000543114 TMEM187Q14656 261 aa14.32□□□□□ -0.12
CACNA1C-230ENST00000543114 MLANAQ16655 118 aa14.32□□□□□ -0.12
CACNA1C-230ENST00000543114 BSXQ3C1V8 233 aa14.32□□□□□ -0.12
CACNA1C-230ENST00000543114 ABHD1Q96SE0 405 aa14.32□□□□□ -0.12
CACNA1C-230ENST00000543114 TMEM231Q9H6L2 316 aa14.32□□□□□ -0.12
CACNA1C-230ENST00000543114 GABARAPO95166 117 aa14.31□□□□□ -0.12
CACNA1C-230ENST00000543114 NPPCP23582 126 aa14.31□□□□□ -0.12
CACNA1C-230ENST00000543114 CTF1Q16619 201 aa14.31□□□□□ -0.12
CACNA1C-230ENST00000543114 SCGB2B2Q4G0G5 96 aa14.31□□□□□ -0.12
CACNA1C-230ENST00000543114 Q6ZRM9 215 aa14.31□□□□□ -0.12
CACNA1C-230ENST00000543114 CCDC71LQ8N9Z2 235 aa14.31□□□□□ -0.12
CACNA1C-230ENST00000543114 STXBP6Q8NFX7 210 aa14.31□□□□□ -0.12
CACNA1C-230ENST00000543114 OR4X1Q8NH49 305 aa14.31□□□□□ -0.12
CACNA1C-230ENST00000543114 AP3S1Q92572 193 aa14.31□□□□□ -0.12
CACNA1C-230ENST00000543114 METTL26Q96S19 204 aa14.31□□□□□ -0.12
CACNA1C-230ENST00000543114 HERC2O95714 4834 aa14.31□□□□□ -0.12
CACNA1C-230ENST00000543114 K7EQG2 157 aa14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 IGKV1-17P01599 117 aa14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 CD74P04233 296 aa14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 GIG44P09565 113 aaPredicted RBP14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 CRYBB3P26998 211 aa14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 P2RY1P47900 373 aa14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 FAAP20Q6NZ36 180 aa14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 TRPT1Q86TN4 253 aaKnown RBP14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 STHQ8IWL8 128 aa14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 Q8NAQ8 132 aa14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 TERB2Q8NHR7 220 aa14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 RNASE11Q8TAA1 199 aaKnown RBP14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 ZFAND1Q8TCF1 268 aa14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 MARCH1Q8TCQ1 289 aa14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 RRNAD1Q96FB5 475 aaKnown RBP14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 ENY2Q9NPA8 101 aa14.3□□□□□ -0.12
CACNA1C-230ENST00000543114 A0A1W2PS18 150 aa14.29□□□□□ -0.12
CACNA1C-230ENST00000543114 OR5AC1P0C628 307 aa14.29□□□□□ -0.12
CACNA1C-230ENST00000543114 ZNF182P17025 639 aaPredicted RBP14.29□□□□□ -0.12
CACNA1C-230ENST00000543114 C4BPBP20851 252 aa14.29□□□□□ -0.12
CACNA1C-230ENST00000543114 RPL5P46777 297 aaKnown RBP14.29□□□□□ -0.12
CACNA1C-230ENST00000543114 TAS2R19P59542 299 aa14.29□□□□□ -0.12
CACNA1C-230ENST00000543114 TIGITQ495A1 244 aa14.29□□□□□ -0.12
CACNA1C-230ENST00000543114 TMEM229BQ8NBD8 167 aa14.29□□□□□ -0.12
CACNA1C-230ENST00000543114 LHFPL5Q8TAF8 219 aa14.29□□□□□ -0.12
CACNA1C-230ENST00000543114 RAB3DO95716 219 aa14.28□□□□□ -0.12
CACNA1C-230ENST00000543114 IFNA4P05014 189 aa14.28□□□□□ -0.12
CACNA1C-230ENST00000543114 ZNF688P0C7X2 276 aa14.28□□□□□ -0.12
CACNA1C-230ENST00000543114 SMIM18P0DKX4 95 aa14.28□□□□□ -0.12
CACNA1C-230ENST00000543114 AARDQ4LEZ3 155 aa14.28□□□□□ -0.12
CACNA1C-230ENST00000543114 STEAP1BQ6NZ63 245 aa14.28□□□□□ -0.12
CACNA1C-230ENST00000543114 DCANP1Q8TF63 244 aa14.28□□□□□ -0.12
CACNA1C-230ENST00000543114 TMEM230Q96A57 120 aa14.28□□□□□ -0.12
CACNA1C-230ENST00000543114 GRAMD2BQ96HH9 432 aa14.28□□□□□ -0.12
CACNA1C-230ENST00000543114 MIXL1Q9H2W2 232 aa14.28□□□□□ -0.12
CACNA1C-230ENST00000543114 KNCNA6PVL3 124 aa14.27□□□□□ -0.13
CACNA1C-230ENST00000543114 B3GALNT1O75752 331 aa14.27□□□□□ -0.13
CACNA1C-230ENST00000543114 SPCS3P61009 180 aa14.27□□□□□ -0.13
CACNA1C-230ENST00000543114 PRR20EP86478 221 aa14.27□□□□□ -0.13
CACNA1C-230ENST00000543114 PRR20CP86479 221 aa14.27□□□□□ -0.13
CACNA1C-230ENST00000543114 PRR20DP86480 221 aa14.27□□□□□ -0.13
CACNA1C-230ENST00000543114 PRR20BP86481 221 aa14.27□□□□□ -0.13
CACNA1C-230ENST00000543114 PRR20AP86496 221 aa14.27□□□□□ -0.13
CACNA1C-230ENST00000543114 C2CD4CQ8TF44 421 aa14.27□□□□□ -0.13
CACNA1C-230ENST00000543114 TMEM222Q9H0R3 208 aa14.27□□□□□ -0.13
CACNA1C-230ENST00000543114 IGHV4-28A0A0C4DH34 117 aa14.26□□□□□ -0.13
CACNA1C-230ENST00000543114 SCGB2A1O75556 95 aa14.26□□□□□ -0.13
CACNA1C-230ENST00000543114 CDS2O95674 445 aa14.26□□□□□ -0.13
CACNA1C-230ENST00000543114 IGLC1P0CG04 106 aa14.26□□□□□ -0.13
CACNA1C-230ENST00000543114 FAM219AQ8IW50 185 aa14.26□□□□□ -0.13
CACNA1C-230ENST00000543114 OR52E5Q8NH55 327 aa14.26□□□□□ -0.13
CACNA1C-230ENST00000543114 GLYATL2Q8WU03 294 aa14.26□□□□□ -0.13
CACNA1C-230ENST00000543114 NAA60Q9H7X0 242 aa14.26□□□□□ -0.13
CACNA1C-230ENST00000543114 GABARAPH6UMI1 98 aa14.25□□□□□ -0.13
CACNA1C-230ENST00000543114 RBMY1A1P0DJD3 496 aaKnown RBP14.25□□□□□ -0.13
CACNA1C-230ENST00000543114 RBMY1CP0DJD4 496 aa14.25□□□□□ -0.13
CACNA1C-230ENST00000543114 HTR2BP41595 481 aa14.25□□□□□ -0.13
CACNA1C-230ENST00000543114 RND2P52198 227 aa14.25□□□□□ -0.13
CACNA1C-230ENST00000543114 RBMY1FQ15415 496 aaKnown RBP14.25□□□□□ -0.13
CACNA1C-230ENST00000543114 GPR107Q5VW38 600 aa14.25□□□□□ -0.13
CACNA1C-230ENST00000543114 PRSS54Q6PEW0 395 aa14.25□□□□□ -0.13
CACNA1C-230ENST00000543114 C15orf40Q8WUR7 153 aa14.25□□□□□ -0.13
CACNA1C-230ENST00000543114 RBPMSQ93062 196 aaKnown RBP14.25□□□□□ -0.13
CACNA1C-230ENST00000543114 NARS2Q96I59 477 aaKnown RBP14.25□□□□□ -0.13
CACNA1C-230ENST00000543114 RTBDNQ9BSG5 229 aaPredicted RBP14.25□□□□□ -0.13
CACNA1C-230ENST00000543114 CACNG5Q9UF02 275 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms