RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 PQLC2Q6ZP29 291 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 CENPVQ7Z7K6 275 aaPredicted RBP8.27□□□□□ -1.09
TOP3A-208ENST00000542570 COMMD1Q8N668 190 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 CLDND2Q8NHS1 167 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 ASCL2Q99929 193 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 YAE1D1Q9NRH1 226 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 NAT8BQ9UHF3 227 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 NBR2O15453 112 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 BATFQ16520 125 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 RNF212Q495C1 297 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 CRIP3Q6Q6R5 217 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 Q6ZPA2 131 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 FAM210BQ96KR6 192 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 TOLLIPQ9H0E2 274 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 SRRM4A7MD48 611 aaKnown RBP8.27□□□□□ -1.09
TOP3A-208ENST00000542570 H3BUX3 64 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 CHEK1O14757 476 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 WFDC12Q8WWY7 111 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 SEC11CQ9BY50 192 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 CHD3Q12873 2000 aaKnown RBP8.26□□□□□ -1.09
TOP3A-208ENST00000542570 NCKAP5O14513 1909 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 ORM1P02763 201 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 CTRB1P17538 263 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 CFPP27918 469 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 SAA4P35542 130 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 CTRB2Q6GPI1 263 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 ZNF439Q8NDP4 499 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 STXBP6Q8NFX7 210 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 HSPB7Q9UBY9 170 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 H0YJW9 148 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 LCNL1Q6ZST4 164 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 SGMS2Q8NHU3 365 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 ARPC1AQ92747 370 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 TMEM167BQ9NRX6 74 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 FOXI3A8MTJ6 420 aaPredicted RBP8.26□□□□□ -1.09
TOP3A-208ENST00000542570 C15orf65H3BRN8 121 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 MFAP4P55083 255 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 S100A12P80511 92 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 RELBQ01201 579 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 SLC25A48Q6ZT89 311 aaKnown RBP8.26□□□□□ -1.09
TOP3A-208ENST00000542570 RPP25LQ8N5L8 163 aaKnown RBP8.26□□□□□ -1.09
TOP3A-208ENST00000542570 LRTM2Q8N967 370 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 OR10G8Q8NGN5 311 aa8.26□□□□□ -1.09
TOP3A-208ENST00000542570 BUB1B-PAK6H3BSN5 160 aa8.25□□□□□ -1.09
TOP3A-208ENST00000542570 M0QZ24 198 aa8.25□□□□□ -1.09
TOP3A-208ENST00000542570 GATCO43716 136 aaKnown RBP8.25□□□□□ -1.09
TOP3A-208ENST00000542570 KHDC3LQ587J8 217 aa8.25□□□□□ -1.09
TOP3A-208ENST00000542570 CFAP46Q8IYW2 2715 aa8.25□□□□□ -1.09
TOP3A-208ENST00000542570 RAB4AP20338 218 aa8.25□□□□□ -1.09
TOP3A-208ENST00000542570 KIAA1644Q3SXP7 199 aa8.25□□□□□ -1.09
TOP3A-208ENST00000542570 PARLQ9H300 379 aa8.25□□□□□ -1.09
TOP3A-208ENST00000542570 C8orf88P0DMB2 117 aa8.25□□□□□ -1.09
TOP3A-208ENST00000542570 IGFL4Q6B9Z1 124 aa8.25□□□□□ -1.09
TOP3A-208ENST00000542570 TREML4Q6UXN2 200 aa8.25□□□□□ -1.09
TOP3A-208ENST00000542570 SEPSECSQ9HD40 501 aaKnown RBP8.25□□□□□ -1.09
TOP3A-208ENST00000542570 NAT8Q9UHE5 227 aa8.25□□□□□ -1.09
TOP3A-208ENST00000542570 IER3P46695 156 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 CX3CL1P78423 397 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 GOLT1AQ6ZVE7 132 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 OR2D3Q8NGH3 330 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 NDFIP1Q9BT67 221 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 TRAPPC1Q9Y5R8 145 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 SLC17A3O00476 420 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 CLN5O75503 358 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 LY86O95711 162 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 SRSF4Q08170 494 aaKnown RBP8.24□□□□□ -1.09
TOP3A-208ENST00000542570 ICAM4Q14773 271 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 TMEM155Q4W5P6 130 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.24□□□□□ -1.09
TOP3A-208ENST00000542570 OR4B1Q8NGF8 309 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 NIT2Q9NQR4 276 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 ANKRD17O75179 2603 aaKnown RBP8.24□□□□□ -1.09
TOP3A-208ENST00000542570 TRBV6-6A0A0A6YYG2 114 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 SCO2A0A1W2PP80 73 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 GCHFRP30047 84 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 GATA4P43694 442 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 GNG5P63218 68 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 CYP2G1PQ6ZSU1 146 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 ITLN2Q8WWU7 325 aaPredicted RBP8.24□□□□□ -1.09
TOP3A-208ENST00000542570 OR51M1Q9H341 326 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 C21orf62Q9NYP8 219 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 FUT9Q9Y231 359 aa8.24□□□□□ -1.09
TOP3A-208ENST00000542570 PMCHP20382 165 aa8.23□□□□□ -1.09
TOP3A-208ENST00000542570 KRTAP27-1Q3LI81 207 aa8.23□□□□□ -1.09
TOP3A-208ENST00000542570 TGIF2-C20orf24A0A0A6YYL0 155 aa8.23□□□□□ -1.09
TOP3A-208ENST00000542570 G3V318 75 aa8.23□□□□□ -1.09
TOP3A-208ENST00000542570 RHOGP84095 191 aa8.23□□□□□ -1.09
TOP3A-208ENST00000542570 PRSS8Q16651 343 aa8.23□□□□□ -1.09
TOP3A-208ENST00000542570 TMEM208Q9BTX3 173 aa8.23□□□□□ -1.09
TOP3A-208ENST00000542570 MANBALQ9NQG1 85 aa8.23□□□□□ -1.09
TOP3A-208ENST00000542570 IGHV3OR16-12A0A075B7B8 117 aa8.23□□□□□ -1.09
TOP3A-208ENST00000542570 C15orf62A8K5M9 175 aa8.23□□□□□ -1.09
TOP3A-208ENST00000542570 MPDU1O75352 247 aa8.23□□□□□ -1.09
TOP3A-208ENST00000542570 PAX9P55771 341 aa8.23□□□□□ -1.09
TOP3A-208ENST00000542570 GLMPQ8WWB7 406 aa8.23□□□□□ -1.09
TOP3A-208ENST00000542570 PRCDQ00LT1 54 aa8.22□□□□□ -1.09
TOP3A-208ENST00000542570 TPTE2P1Q5T6R2 138 aa8.22□□□□□ -1.09
TOP3A-208ENST00000542570 ASPHD1Q5U4P2 390 aa8.22□□□□□ -1.09
TOP3A-208ENST00000542570 OR5R1Q8NH85 324 aa8.22□□□□□ -1.09
TOP3A-208ENST00000542570 RITA1Q96K30 269 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms