RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 RBFOX2O43251 390 aaKnown RBP eCLIP2.16□□□□□ -2.06
LEMD3-204ENST00000542032 IGHV1-46P01743 117 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 TRGV3P03979 118 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 IFNA4P05014 189 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 CGB3P0DN86 165 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 CGB7P0DN87 165 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 LGALS3P17931 250 aaKnown RBP2.16□□□□□ -2.06
LEMD3-204ENST00000542032 S100A4P26447 101 aaKnown RBP2.16□□□□□ -2.06
LEMD3-204ENST00000542032 SDC2P34741 201 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 CXCL12P48061 93 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 NDUFA6P56556 154 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 TSPEAR-AS2P59090 65 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 KRTAP10-10P60014 251 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 COPZ1P61923 177 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 BIKQ13323 160 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 LGALS9BQ3B8N2 356 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 VMA21Q3ZAQ7 101 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 OCIAD2Q56VL3 154 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 Q5XG85 94 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 LGALS9CQ6DKI2 356 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 ZNF767PQ75MW2 155 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 ADM2Q7Z4H4 148 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 SPATA12Q7Z6I5 190 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 IFT20Q8IY31 132 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 ZNF101Q8IZC7 436 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 RPP25LQ8N5L8 163 aaKnown RBP2.16□□□□□ -2.06
LEMD3-204ENST00000542032 ZFAND2AQ8N6M9 145 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 OR51A4Q8NGJ6 313 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 LINC01560Q8TB33 94 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 RPS4Y2Q8TD47 263 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 RBPMSQ93062 196 aaKnown RBP2.16□□□□□ -2.06
LEMD3-204ENST00000542032 SLC25A46Q96AG3 418 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 PPP3R2Q96LZ3 170 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 ZNF471Q9BX82 626 aaPredicted RBP2.16□□□□□ -2.06
LEMD3-204ENST00000542032 TCEAL2Q9H3H9 227 aaPredicted RBP2.16□□□□□ -2.06
LEMD3-204ENST00000542032 RNF122Q9H9V4 155 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 MRPL16Q9NX20 251 aaKnown RBP2.16□□□□□ -2.06
LEMD3-204ENST00000542032 SNX12Q9UMY4 172 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 TNFSF18Q9UNG2 199 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 ZNF835Q9Y2P0 537 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 KLK5Q9Y337 293 aaPredicted RBP2.16□□□□□ -2.06
LEMD3-204ENST00000542032 TMEM14AQ9Y6G1 99 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 KIAA1671Q9BY89 1806 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 KDM5BQ9UGL1 1544 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 ANKRD12Q6UB98 2062 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 DOCK4Q8N1I0 1966 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 OTOFQ9HC10 1997 aa2.16□□□□□ -2.06
LEMD3-204ENST00000542032 NUP210Q8TEM1 1887 aaPredicted RBP2.16□□□□□ -2.06
LEMD3-204ENST00000542032 CEP170Q5SW79 1584 aa2.15□□□□□ -2.06
LEMD3-204ENST00000542032 A2MP01023 1474 aa2.15□□□□□ -2.06
LEMD3-204ENST00000542032 DOCK8Q8NF50 2099 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 ODAMA1E959 279 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 C20orf202A1L168 122 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 ARRDC5A6NEK1 342 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 GGT3PA6NGU5 568 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 SLC22A1O15245 554 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 GGCTO75223 188 aaKnown RBP2.15□□□□□ -2.07
LEMD3-204ENST00000542032 PGLYRP1O75594 196 aaPredicted RBP2.15□□□□□ -2.07
LEMD3-204ENST00000542032 CST7O76096 145 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 GPX1P07203 203 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 P0DMU3 169 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 FAM231AP0DMU4 169 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 FAM231CP0DMU5 169 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 LINC00694P0DN24 101 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 FABP2P12104 132 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 NPPCP23582 126 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 SRP14P37108 136 aaKnown RBP2.15□□□□□ -2.07
LEMD3-204ENST00000542032 TAS2R20P59543 309 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 EIF5AP63241 154 aaKnown RBP2.15□□□□□ -2.07
LEMD3-204ENST00000542032 OR8G1Q15617 311 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 MRPL51Q4U2R6 128 aaKnown RBP2.15□□□□□ -2.07
LEMD3-204ENST00000542032 TMEM69Q5SWH9 247 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 BCL2L15Q5TBC7 163 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 Q6ZR03 302 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 LINC00305Q7Z4B0 112 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 OR8D4Q8NGM9 314 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 SLC39A9Q9NUM3 307 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 BAIAP2Q9UQB8 552 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 HS3ST2Q9Y278 367 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 RNF11Q9Y3C5 154 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 REREQ9P2R6 1566 aa2.15□□□□□ -2.07
LEMD3-204ENST00000542032 SVILO95425 2214 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 DSCAMO60469 2012 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 NUP205Q92621 2012 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 FAM135AQ9P2D6 1515 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 IRGMA1A4Y4 181 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 A8MWP4 228 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 CORTO00230 105 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 LEPROTO15243 131 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 SH2D1AO60880 128 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 NDUFB2O95178 105 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 NAPSAO96009 420 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 IGLC6P0CF74 106 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 IGHV3-30-3P0DP02 117 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 FGF7P21781 194 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 RPL27AP46776 148 aaKnown RBP2.14□□□□□ -2.07
LEMD3-204ENST00000542032 RAB5CP51148 216 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 TMBIM6P55061 237 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 GNG2P59768 71 aa2.14□□□□□ -2.07
LEMD3-204ENST00000542032 MEF2BQ02080 365 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms