RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 P0DMU3 169 aa9.43□□□□□ -0.9
SCARB1-207ENST00000541661 FAM231AP0DMU4 169 aa9.43□□□□□ -0.9
SCARB1-207ENST00000541661 FAM231CP0DMU5 169 aa9.43□□□□□ -0.9
SCARB1-207ENST00000541661 PRSS3P35030 304 aa9.43□□□□□ -0.9
SCARB1-207ENST00000541661 HRH1P35367 487 aa9.43□□□□□ -0.9
SCARB1-207ENST00000541661 UCP3P55916 312 aa9.43□□□□□ -0.9
SCARB1-207ENST00000541661 TAS2R20P59543 309 aa9.43□□□□□ -0.9
SCARB1-207ENST00000541661 C12orf74Q32Q52 190 aa9.43□□□□□ -0.9
SCARB1-207ENST00000541661 UBE2NLQ5JXB2 153 aa9.43□□□□□ -0.9
SCARB1-207ENST00000541661 CROCCP3Q8IVE0 287 aa9.43□□□□□ -0.9
SCARB1-207ENST00000541661 DCANP1Q8TF63 244 aa9.43□□□□□ -0.9
SCARB1-207ENST00000541661 MRGPRFQ96AM1 343 aa9.43□□□□□ -0.9
SCARB1-207ENST00000541661 DEFB131BA0A096LNP1 70 aa9.42□□□□□ -0.9
SCARB1-207ENST00000541661 KNCNA6PVL3 124 aa9.42□□□□□ -0.9
SCARB1-207ENST00000541661 CORTO00230 105 aa9.42□□□□□ -0.9
SCARB1-207ENST00000541661 ZNF688P0C7X2 276 aa9.42□□□□□ -0.9
SCARB1-207ENST00000541661 SNCAP37840 140 aa9.42□□□□□ -0.9
SCARB1-207ENST00000541661 P2RY1P47900 373 aa9.42□□□□□ -0.9
SCARB1-207ENST00000541661 KCTD21Q4G0X4 260 aa9.42□□□□□ -0.9
SCARB1-207ENST00000541661 TMEM69Q5SWH9 247 aa9.42□□□□□ -0.9
SCARB1-207ENST00000541661 STXBP6Q8NFX7 210 aa9.42□□□□□ -0.9
SCARB1-207ENST00000541661 METTL26Q96S19 204 aa9.42□□□□□ -0.9
SCARB1-207ENST00000541661 CELA1Q9UNI1 258 aa9.42□□□□□ -0.9
SCARB1-207ENST00000541661 CLN5O75503 358 aa9.41□□□□□ -0.9
SCARB1-207ENST00000541661 P0C879 139 aa9.41□□□□□ -0.9
SCARB1-207ENST00000541661 RNASE2P10153 161 aaKnown RBP9.41□□□□□ -0.9
SCARB1-207ENST00000541661 HLA-DMAP28067 261 aa9.41□□□□□ -0.9
SCARB1-207ENST00000541661 TSPAN5P62079 268 aa9.41□□□□□ -0.9
SCARB1-207ENST00000541661 LGALS9BQ3B8N2 356 aa9.41□□□□□ -0.9
SCARB1-207ENST00000541661 ACTL10Q5JWF8 245 aa9.41□□□□□ -0.9
SCARB1-207ENST00000541661 OR4X1Q8NH49 305 aa9.41□□□□□ -0.9
SCARB1-207ENST00000541661 GPX8Q8TED1 209 aa9.41□□□□□ -0.9
SCARB1-207ENST00000541661 RAB40CQ96S21 281 aa9.41□□□□□ -0.9
SCARB1-207ENST00000541661 CLEC5AQ9NY25 188 aa9.41□□□□□ -0.9
SCARB1-207ENST00000541661 U3KQE9 123 aa9.41□□□□□ -0.9
SCARB1-207ENST00000541661 A0A0B4J293 547 aa9.4□□□□□ -0.9
SCARB1-207ENST00000541661 TNFAIP8O95379 198 aa9.4□□□□□ -0.9
SCARB1-207ENST00000541661 RPL5P46777 297 aaKnown RBP9.4□□□□□ -0.9
SCARB1-207ENST00000541661 PPP5CP53041 499 aa9.4□□□□□ -0.9
SCARB1-207ENST00000541661 SUB1P53999 127 aaKnown RBP eCLIP9.4□□□□□ -0.9
SCARB1-207ENST00000541661 IZUMO4Q1ZYL8 232 aa9.4□□□□□ -0.9
SCARB1-207ENST00000541661 SPINK9Q5DT21 86 aa9.4□□□□□ -0.9
SCARB1-207ENST00000541661 SAMD12Q8N8I0 201 aa9.4□□□□□ -0.9
SCARB1-207ENST00000541661 NDUFAF3Q9BU61 184 aa9.4□□□□□ -0.9
SCARB1-207ENST00000541661 FNDC4Q9H6D8 234 aaPredicted RBP9.4□□□□□ -0.9
SCARB1-207ENST00000541661 MRPL36Q9P0J6 103 aaKnown RBP9.4□□□□□ -0.9
SCARB1-207ENST00000541661 IGKV1-17P01599 117 aa9.39□□□□□ -0.91
SCARB1-207ENST00000541661 IGKV1-5P01602 117 aa9.39□□□□□ -0.91
SCARB1-207ENST00000541661 NPY1RP25929 384 aa9.39□□□□□ -0.91
SCARB1-207ENST00000541661 RPS19P39019 145 aaKnown RBP9.39□□□□□ -0.91
SCARB1-207ENST00000541661 EIF2B2P49770 351 aaKnown RBP9.39□□□□□ -0.91
SCARB1-207ENST00000541661 RND3P61587 244 aa9.39□□□□□ -0.91
SCARB1-207ENST00000541661 DHRS2Q13268 280 aa9.39□□□□□ -0.91
SCARB1-207ENST00000541661 MLANAQ16655 118 aa9.39□□□□□ -0.91
SCARB1-207ENST00000541661 SLC35G3Q8N808 338 aa9.39□□□□□ -0.91
SCARB1-207ENST00000541661 TMEM230Q96A57 120 aa9.39□□□□□ -0.91
SCARB1-207ENST00000541661 NARS2Q96I59 477 aaKnown RBP9.39□□□□□ -0.91
SCARB1-207ENST00000541661 C1QTNF4Q9BXJ3 329 aa9.39□□□□□ -0.91
SCARB1-207ENST00000541661 TRAV30A0A087WSZ9 112 aa9.38□□□□□ -0.91
SCARB1-207ENST00000541661 HELTA6NFD8 242 aa9.38□□□□□ -0.91
SCARB1-207ENST00000541661 M0R2N4 97 aa9.38□□□□□ -0.91
SCARB1-207ENST00000541661 SCGB2A1O75556 95 aa9.38□□□□□ -0.91
SCARB1-207ENST00000541661 IFNA17P01571 189 aa9.38□□□□□ -0.91
SCARB1-207ENST00000541661 AP2S1P53680 142 aaPredicted RBP9.38□□□□□ -0.91
SCARB1-207ENST00000541661 NUTF2P61970 127 aaKnown RBP9.38□□□□□ -0.91
SCARB1-207ENST00000541661 BSXQ3C1V8 233 aa9.38□□□□□ -0.91
SCARB1-207ENST00000541661 C16orf54Q6UWD8 224 aa9.38□□□□□ -0.91
SCARB1-207ENST00000541661 ZNF767PQ75MW2 155 aa9.38□□□□□ -0.91
SCARB1-207ENST00000541661 GLMPQ8WWB7 406 aa9.38□□□□□ -0.91
SCARB1-207ENST00000541661 ZNF486Q96H40 463 aaPredicted RBP9.38□□□□□ -0.91
SCARB1-207ENST00000541661 NEU1Q99519 415 aa9.38□□□□□ -0.91
SCARB1-207ENST00000541661 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
SCARB1-207ENST00000541661 SCPEP1Q9HB40 452 aa9.38□□□□□ -0.91
SCARB1-207ENST00000541661 SEPSECSQ9HD40 501 aaKnown RBP9.38□□□□□ -0.91
SCARB1-207ENST00000541661 NDUFA13Q9P0J0 144 aa9.38□□□□□ -0.91
SCARB1-207ENST00000541661 CD74P04233 296 aa9.37□□□□□ -0.91
SCARB1-207ENST00000541661 TGFBR1P36897 503 aa9.37□□□□□ -0.91
SCARB1-207ENST00000541661 OPRK1P41145 380 aa9.37□□□□□ -0.91
SCARB1-207ENST00000541661 ETV6P41212 452 aa9.37□□□□□ -0.91
SCARB1-207ENST00000541661 TIGITQ495A1 244 aa9.37□□□□□ -0.91
SCARB1-207ENST00000541661 PSMG4Q5JS54 123 aa9.37□□□□□ -0.91
SCARB1-207ENST00000541661 Q6ZR54 194 aa9.37□□□□□ -0.91
SCARB1-207ENST00000541661 FAM210BQ96KR6 192 aa9.37□□□□□ -0.91
SCARB1-207ENST00000541661 MRPS26Q9BYN8 205 aaKnown RBP9.37□□□□□ -0.91
SCARB1-207ENST00000541661 H3BMM0 161 aa9.36□□□□□ -0.91
SCARB1-207ENST00000541661 ATG12O94817 140 aa9.36□□□□□ -0.91
SCARB1-207ENST00000541661 SMIM18P0DKX4 95 aa9.36□□□□□ -0.91
SCARB1-207ENST00000541661 RCVRNP35243 200 aa9.36□□□□□ -0.91
SCARB1-207ENST00000541661 NEDD8Q15843 81 aa9.36□□□□□ -0.91
SCARB1-207ENST00000541661 ZNF705AQ6ZN79 300 aaPredicted RBP9.36□□□□□ -0.91
SCARB1-207ENST00000541661 TP53RKQ96S44 253 aa9.36□□□□□ -0.91
SCARB1-207ENST00000541661 PDCD10Q9BUL8 212 aa9.36□□□□□ -0.91
SCARB1-207ENST00000541661 XCL2Q9UBD3 114 aa9.36□□□□□ -0.91
SCARB1-207ENST00000541661 HSPG2P98160 4391 aa9.35□□□□□ -0.91
SCARB1-207ENST00000541661 TMEM189A5PLL7 270 aa9.35□□□□□ -0.91
SCARB1-207ENST00000541661 FAM90A26D6RGX4 464 aa9.35□□□□□ -0.91
SCARB1-207ENST00000541661 IFNA10P01566 189 aa9.35□□□□□ -0.91
SCARB1-207ENST00000541661 HNRNPCP07910 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCARB1-207ENST00000541661 IGLC1P0CG04 106 aa9.35□□□□□ -0.91
SCARB1-207ENST00000541661 SPART-AS1P0CW21 52 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms