RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 CELSR2Q9HCU4 2923 aa12.19□□□□□ -0.46
VARS2-211ENST00000541562 PNKDQ8N490 385 aa12.19□□□□□ -0.46
VARS2-211ENST00000541562 ZNF439Q8NDP4 499 aa12.19□□□□□ -0.46
VARS2-211ENST00000541562 ZNF430Q9H8G1 570 aaPredicted RBP12.19□□□□□ -0.46
VARS2-211ENST00000541562 RNF114Q9Y508 228 aa12.19□□□□□ -0.46
VARS2-211ENST00000541562 ELOA3CA0A087WX78 387 aaPredicted RBP12.19□□□□□ -0.46
VARS2-211ENST00000541562 J3QW42 95 aa12.19□□□□□ -0.46
VARS2-211ENST00000541562 APOA2P02652 100 aa12.19□□□□□ -0.46
VARS2-211ENST00000541562 MZT1Q08AG7 82 aa12.19□□□□□ -0.46
VARS2-211ENST00000541562 C1orf162Q8NEQ5 155 aaPredicted RBP12.19□□□□□ -0.46
VARS2-211ENST00000541562 CMTM2Q8TAZ6 248 aa12.19□□□□□ -0.46
VARS2-211ENST00000541562 DDB2Q92466 427 aa12.19□□□□□ -0.46
VARS2-211ENST00000541562 TP73-AS1Q9UF72 201 aa12.19□□□□□ -0.46
VARS2-211ENST00000541562 DSCAML1Q8TD84 2053 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 PIGBOS1A0A0B4J2F0 54 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 MKRN2OSH3BPM6 223 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 F2RL2O00254 374 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 NDUFB3O43676 98 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 RAB7AP51149 207 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 FOXA3P55318 350 aaPredicted RBP12.18□□□□□ -0.46
VARS2-211ENST00000541562 RPL8P62917 257 aaKnown RBP12.18□□□□□ -0.46
VARS2-211ENST00000541562 ZNF788Q6ZQV5 615 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 ANAPC16Q96DE5 110 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 KCNIP2Q9NS61 270 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 RPUSD1Q9UJJ7 312 aaKnown RBP12.18□□□□□ -0.46
VARS2-211ENST00000541562 ZNF835Q9Y2P0 537 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 C17orf100A8MU93 164 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 UPK2O00526 184 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 LHBP01229 141 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 TGIF2LXQ8IUE1 241 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 ZNF503Q96F45 646 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 EAF1Q96JC9 268 aaPredicted RBP12.18□□□□□ -0.46
VARS2-211ENST00000541562 BTF3L4Q96K17 158 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 ACACBO00763 2458 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 HES1Q14469 280 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 ACTL10Q5JWF8 245 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 LINC00469Q8N7U9 141 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 FBXL15Q9H469 300 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 TMEM14BQ9NUH8 114 aa12.18□□□□□ -0.46
VARS2-211ENST00000541562 NKX6-3A6NJ46 265 aa12.17□□□□□ -0.46
VARS2-211ENST00000541562 THBDP07204 575 aa12.17□□□□□ -0.46
VARS2-211ENST00000541562 ERASQ7Z444 233 aa12.17□□□□□ -0.46
VARS2-211ENST00000541562 SLC35E1Q96K37 410 aa12.17□□□□□ -0.46
VARS2-211ENST00000541562 RCHY1Q96PM5 261 aa12.17□□□□□ -0.46
VARS2-211ENST00000541562 SLC25A33Q9BSK2 321 aa12.17□□□□□ -0.46
VARS2-211ENST00000541562 ONECUT1Q9UBC0 465 aa12.17□□□□□ -0.46
VARS2-211ENST00000541562 IL19Q9UHD0 177 aa12.17□□□□□ -0.46
VARS2-211ENST00000541562 RBP4P02753 201 aa12.17□□□□□ -0.46
VARS2-211ENST00000541562 TIGITQ495A1 244 aa12.17□□□□□ -0.46
VARS2-211ENST00000541562 PRSS46E5RG02 174 aa12.17□□□□□ -0.46
VARS2-211ENST00000541562 ARF6P62330 175 aa12.16□□□□□ -0.46
VARS2-211ENST00000541562 ERHP84090 104 aaKnown RBP12.16□□□□□ -0.46
VARS2-211ENST00000541562 LCN12Q6JVE5 192 aa12.16□□□□□ -0.46
VARS2-211ENST00000541562 Q6ZS92 163 aa12.16□□□□□ -0.46
VARS2-211ENST00000541562 PRSS33Q8NF86 280 aa12.16□□□□□ -0.46
VARS2-211ENST00000541562 SH2D7A6NKC9 451 aaPredicted RBP12.16□□□□□ -0.46
VARS2-211ENST00000541562 SRIP30626 198 aa12.16□□□□□ -0.46
VARS2-211ENST00000541562 CENPVQ7Z7K6 275 aaPredicted RBP12.16□□□□□ -0.46
VARS2-211ENST00000541562 TMEM106BQ9NUM4 274 aa12.16□□□□□ -0.46
VARS2-211ENST00000541562 TMEM242Q9NWH2 141 aa12.16□□□□□ -0.46
VARS2-211ENST00000541562 FLNCQ14315 2725 aa12.16□□□□□ -0.46
VARS2-211ENST00000541562 SORL1Q92673 2214 aa12.16□□□□□ -0.46
VARS2-211ENST00000541562 RNASE2P10153 161 aaKnown RBP12.15□□□□□ -0.46
VARS2-211ENST00000541562 LYZP61626 148 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 PKIAP61925 76 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 TCF15Q12870 199 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 KLRD1Q13241 179 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 JOSD1Q15040 202 aaPredicted RBP12.15□□□□□ -0.46
VARS2-211ENST00000541562 MAJINQ3KP22 176 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 TCF24Q7RTU0 167 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 OR2D3Q8NGH3 330 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 LPAR2Q9HBW0 351 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 ISLRO14498 428 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 ZNF253O75346 499 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 CNIH1O95406 144 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 TNFRSF1AP19438 455 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 TFPI2P48307 235 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 AMTP48728 403 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 IGFL2Q6UWQ7 119 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 SCNM1Q9BWG6 230 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 LSM4Q9Y4Z0 139 aaKnown RBP12.15□□□□□ -0.46
VARS2-211ENST00000541562 PTPN13Q12923 2485 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 TMSB15BA0A087X1C1 80 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 TGOLN2O43493 480 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 GGCTO75223 188 aaKnown RBP12.15□□□□□ -0.46
VARS2-211ENST00000541562 MFAP2P55001 183 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 RPEL1Q2QD12 228 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 VWC2Q2TAL6 325 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 LINC00305Q7Z4B0 112 aa12.15□□□□□ -0.46
VARS2-211ENST00000541562 IGHV3OR16-13A0A075B7E8 117 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 IGHV3-74A0A0B4J1X5 117 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 MT-CO2P00403 227 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 SLC25A5P05141 298 aaKnown RBP12.14□□□□□ -0.47
VARS2-211ENST00000541562 CSN3P07498 182 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 CGB3P0DN86 165 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 CGB7P0DN87 165 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 HOXB1P14653 301 aaPredicted RBP12.14□□□□□ -0.47
VARS2-211ENST00000541562 CDSNQ15517 529 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 LRRC10Q5BKY1 277 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 FAM57AQ8TBR7 257 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms