RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 SPRY3O43610 288 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 IGLC2P0DOY2 106 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 IGLC3P0DOY3 106 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 PRDX2P32119 198 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 C11orf53Q8IXP5 236 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 CXXC4Q9H2H0 198 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 C15orf62A8K5M9 175 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 GPX1P07203 203 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 LCN2P80188 198 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 FBLN7Q53RD9 439 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 TMEM144Q7Z5S9 345 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 CD177Q8N6Q3 437 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 SERTAD4Q9NUC0 356 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 PSG1P11464 419 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 KLF3P57682 345 aaPredicted RBP11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 NHLRC2Q8NBF2 726 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 RNASE7Q9H1E1 156 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 GAL3ST2Q9H3Q3 398 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 UQCR10Q9UDW1 63 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 YLPM1P49750 1951 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 PMS2P5A8MQ11 134 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 RAB29O14966 203 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 C3orf79P0CE67 100 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 PAFAH1B2P68402 229 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 ZNF718Q3SXZ3 478 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 SLC35E4Q6ICL7 350 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 C1orf174Q8IYL3 243 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 ZNF738Q8NE65 137 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 MS4A5Q9H3V2 200 aa11.73□□□□□ -0.53
SFSWAP-210ENST00000541286 SRIP30626 198 aa11.72□□□□□ -0.53
SFSWAP-210ENST00000541286 RANP62826 216 aaKnown RBP11.72□□□□□ -0.53
SFSWAP-210ENST00000541286 TIMM9Q9Y5J7 89 aa11.72□□□□□ -0.53
SFSWAP-210ENST00000541286 K7EN84 100 aa11.72□□□□□ -0.53
SFSWAP-210ENST00000541286 TCTAP57738 103 aa11.72□□□□□ -0.53
SFSWAP-210ENST00000541286 PMCHL1Q16048 86 aa11.72□□□□□ -0.53
SFSWAP-210ENST00000541286 SPATA31B1PQ5VZV4 182 aa11.72□□□□□ -0.53
SFSWAP-210ENST00000541286 Q8N976 141 aa11.72□□□□□ -0.53
SFSWAP-210ENST00000541286 S1PR3Q99500 378 aa11.72□□□□□ -0.53
SFSWAP-210ENST00000541286 IGLV1-44P01699 117 aa11.71□□□□□ -0.53
SFSWAP-210ENST00000541286 MOGAT3Q86VF5 341 aa11.71□□□□□ -0.53
SFSWAP-210ENST00000541286 ZBTB34Q8NCN2 500 aa11.71□□□□□ -0.53
SFSWAP-210ENST00000541286 GCM1Q9NP62 436 aa11.71□□□□□ -0.53
SFSWAP-210ENST00000541286 COX11Q9Y6N1 276 aa11.71□□□□□ -0.53
SFSWAP-210ENST00000541286 GOSR1O95249 250 aa11.71□□□□□ -0.53
SFSWAP-210ENST00000541286 HSD17B10Q99714 261 aaKnown RBP11.71□□□□□ -0.53
SFSWAP-210ENST00000541286 DSCAMO60469 2012 aa11.71□□□□□ -0.53
SFSWAP-210ENST00000541286 A0A1W2PS18 150 aa11.71□□□□□ -0.54
SFSWAP-210ENST00000541286 SNAI2O43623 268 aa11.71□□□□□ -0.54
SFSWAP-210ENST00000541286 PROP1O75360 226 aa11.71□□□□□ -0.54
SFSWAP-210ENST00000541286 FOXH1O75593 365 aa11.71□□□□□ -0.54
SFSWAP-210ENST00000541286 TSPOP30536 169 aa11.71□□□□□ -0.54
SFSWAP-210ENST00000541286 CDKN1BP46527 198 aa11.71□□□□□ -0.54
SFSWAP-210ENST00000541286 RNASE6Q93091 150 aaKnown RBP11.71□□□□□ -0.54
SFSWAP-210ENST00000541286 RNF2Q99496 336 aa11.71□□□□□ -0.54
SFSWAP-210ENST00000541286 SLC45A2Q9UMX9 530 aa11.71□□□□□ -0.54
SFSWAP-210ENST00000541286 MGST1P10620 155 aaKnown RBP11.7□□□□□ -0.54
SFSWAP-210ENST00000541286 DUTP33316 252 aaKnown RBP11.7□□□□□ -0.54
SFSWAP-210ENST00000541286 OR4B1Q8NGF8 309 aa11.7□□□□□ -0.54
SFSWAP-210ENST00000541286 GATA2P23769 480 aaPredicted RBP11.7□□□□□ -0.54
SFSWAP-210ENST00000541286 CD24P25063 80 aa11.7□□□□□ -0.54
SFSWAP-210ENST00000541286 ZNF134P52741 427 aa11.7□□□□□ -0.54
SFSWAP-210ENST00000541286 TREML4Q6UXN2 200 aa11.7□□□□□ -0.54
SFSWAP-210ENST00000541286 TMEM140Q9NV12 185 aa11.7□□□□□ -0.54
SFSWAP-210ENST00000541286 LYNX1G3V0Z9 82 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 LYNX1P0DP58 116 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 GPR6P46095 362 aaPredicted RBP11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 RPL31P62899 125 aaKnown RBP11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 FOXL1Q12952 345 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 S100A7AQ86SG5 101 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 MMD2Q8IY49 270 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 STPG3Q8N7X2 389 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 OR4P4Q8NGL7 312 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 SSBP3Q9BWW4 388 aaPredicted RBP11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 SEPSECSQ9HD40 501 aaKnown RBP11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 ENY2Q9NPA8 101 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 BET1LQ9NYM9 111 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 ZNRD1Q9P1U0 126 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 OR2T8A6NH00 312 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 DUX4L9Q6RFH8 374 aaPredicted RBP11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 C1orf162Q8NEQ5 155 aaPredicted RBP11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 CLEC7AQ9BXN2 247 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 WDR83OSQ9Y284 106 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 NDUFS7O75251 213 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 MPV17L2Q567V2 206 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 MOB3BQ86TA1 216 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 Q8TCH9 128 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 BORCS7Q96B45 105 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 RPH3ALQ9UNE2 315 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 WASHC3Q9Y3C0 194 aa11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 YTHDF2Q9Y5A9 579 aaKnown RBP11.69□□□□□ -0.54
SFSWAP-210ENST00000541286 SH2D7A6NKC9 451 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 E7EQL1 145 aa11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 VENTXO95231 258 aa11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 CTRLP40313 264 aa11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 CCL8P80075 99 aa11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 OR4A47Q6IF82 309 aa11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 ZNF841Q6ZN19 808 aa11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 FAM216AQ8WUB2 273 aa11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 OR2V2Q96R30 315 aa11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 MGST2Q99735 147 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms