RNA–Protein interactions for RNA: ENST00000540665.5

TTC28-AS1-221, TTC28 antisense RNA 1, humanhuman

TSL 1 (best)

Gene TTC28-AS1, Length 802 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-AS1-221ENST00000540665 RNASEH2CQ8TDP1 164 aaKnown RBP12.19□□□□□ -0.46
TTC28-AS1-221ENST00000540665 OR10C1Q96KK4 312 aa12.19□□□□□ -0.46
TTC28-AS1-221ENST00000540665 HIPK2Q9H2X6 1198 aa12.19□□□□□ -0.46
TTC28-AS1-221ENST00000540665 HEYLQ9NQ87 328 aaPredicted RBP12.19□□□□□ -0.46
TTC28-AS1-221ENST00000540665 C19orf73Q9NVV2 129 aa12.19□□□□□ -0.46
TTC28-AS1-221ENST00000540665 RPS10-NUDT3A0A1W2PQS6 291 aa12.18□□□□□ -0.46
TTC28-AS1-221ENST00000540665 OPRK1P41145 380 aa12.18□□□□□ -0.46
TTC28-AS1-221ENST00000540665 C11orf87Q6NUJ2 197 aa12.18□□□□□ -0.46
TTC28-AS1-221ENST00000540665 BTNL8Q6UX41 500 aa12.18□□□□□ -0.46
TTC28-AS1-221ENST00000540665 NOXA1Q86UR1 476 aa12.18□□□□□ -0.46
TTC28-AS1-221ENST00000540665 WDR89Q96FK6 387 aaPredicted RBP12.18□□□□□ -0.46
TTC28-AS1-221ENST00000540665 FNDC4Q9H6D8 234 aaPredicted RBP12.18□□□□□ -0.46
TTC28-AS1-221ENST00000540665 TMED3Q9Y3Q3 217 aa12.18□□□□□ -0.46
TTC28-AS1-221ENST00000540665 A6NHS1 94 aa12.17□□□□□ -0.46
TTC28-AS1-221ENST00000540665 PITX3O75364 302 aa12.17□□□□□ -0.46
TTC28-AS1-221ENST00000540665 SCGB2A1O75556 95 aa12.17□□□□□ -0.46
TTC28-AS1-221ENST00000540665 IGHV3-48P01763 117 aa12.17□□□□□ -0.46
TTC28-AS1-221ENST00000540665 CD81P60033 236 aa12.17□□□□□ -0.46
TTC28-AS1-221ENST00000540665 OR4X1Q8NH49 305 aa12.17□□□□□ -0.46
TTC28-AS1-221ENST00000540665 C20orf24Q9BUV8 137 aa12.17□□□□□ -0.46
TTC28-AS1-221ENST00000540665 CCDC32Q9BV29 185 aa12.17□□□□□ -0.46
TTC28-AS1-221ENST00000540665 FAM90A26D6RGX4 464 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 CLN5O75503 358 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 NXPH3O95157 252 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 TMEM50AO95807 157 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 SLC25A4P12235 298 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 NPY1RP25929 384 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 ATP5IP56385 69 aaPredicted RBP12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 GUCA2BQ16661 112 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 ZNF600Q6ZNG1 722 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 SBSPONQ8IVN8 264 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 OR1S1Q8NH92 325 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 DTD1Q8TEA8 209 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 NEURL2Q9BR09 285 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 GINS3Q9BRX5 216 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 U3KQ87 197 aa12.16□□□□□ -0.46
TTC28-AS1-221ENST00000540665 C9orf170A2RU37 121 aa12.15□□□□□ -0.46
TTC28-AS1-221ENST00000540665 ETFRF1Q6IPR1 90 aa12.15□□□□□ -0.46
TTC28-AS1-221ENST00000540665 SLC16A13Q7RTY0 426 aa12.15□□□□□ -0.46
TTC28-AS1-221ENST00000540665 TMEM170AQ8WVE7 144 aa12.15□□□□□ -0.46
TTC28-AS1-221ENST00000540665 S100ZQ8WXG8 99 aa12.15□□□□□ -0.46
TTC28-AS1-221ENST00000540665 ASCL2Q99929 193 aa12.15□□□□□ -0.46
TTC28-AS1-221ENST00000540665 SPAG8Q99932 426 aaPredicted RBP12.15□□□□□ -0.46
TTC28-AS1-221ENST00000540665 RBKSQ9H477 322 aa12.15□□□□□ -0.46
TTC28-AS1-221ENST00000540665 U3KQK5 164 aa12.15□□□□□ -0.46
TTC28-AS1-221ENST00000540665 TRAV30A0A087WSZ9 112 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 IGHV7-4-1A0A0J9YVY3 117 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 LINC00854A0A1B0GVQ3 168 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 TSPAN4O14817 238 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 PLA2G10O15496 165 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 LYRM1O43325 122 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 CD7P09564 240 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 OR4E1P0C645 316 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 RBPMS2Q6ZRY4 209 aaKnown RBP12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 LYG2Q86SG7 212 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 TMEM116Q8NCL8 245 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 ZFAND3Q9H8U3 227 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 PTTG2Q9NZH5 202 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 MRPL36Q9P0J6 103 aaKnown RBP12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 SMPXQ9UHP9 88 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 FLVCR2Q9UPI3 526 aa12.14□□□□□ -0.47
TTC28-AS1-221ENST00000540665 HUWE1Q7Z6Z7 4374 aaKnown RBP12.13□□□□□ -0.47
TTC28-AS1-221ENST00000540665 IGHV3OR16-8A0A075B7F1 116 aa12.13□□□□□ -0.47
TTC28-AS1-221ENST00000540665 MED6O75586 246 aa12.13□□□□□ -0.47
TTC28-AS1-221ENST00000540665 YIF1AO95070 293 aa12.13□□□□□ -0.47
TTC28-AS1-221ENST00000540665 SCAF4O95104 1147 aaKnown RBP12.13□□□□□ -0.47
TTC28-AS1-221ENST00000540665 IFNA10P01566 189 aa12.13□□□□□ -0.47
TTC28-AS1-221ENST00000540665 BMI1P35226 326 aa12.13□□□□□ -0.47
TTC28-AS1-221ENST00000540665 DHRS2Q13268 280 aa12.13□□□□□ -0.47
TTC28-AS1-221ENST00000540665 LAMTOR1Q6IAA8 161 aa12.13□□□□□ -0.47
TTC28-AS1-221ENST00000540665 TOMM20LQ6UXN7 152 aa12.13□□□□□ -0.47
TTC28-AS1-221ENST00000540665 OR52B4Q8NGK2 314 aa12.13□□□□□ -0.47
TTC28-AS1-221ENST00000540665 COQ8AQ8NI60 647 aa12.13□□□□□ -0.47
TTC28-AS1-221ENST00000540665 TM2D3Q9BRN9 247 aa12.13□□□□□ -0.47
TTC28-AS1-221ENST00000540665 TRAV14DV4A0A0A6YYC5 116 aa12.12□□□□□ -0.47
TTC28-AS1-221ENST00000540665 HOXB5P09067 269 aa12.12□□□□□ -0.47
TTC28-AS1-221ENST00000540665 GGNBP1Q5YKI7 109 aa12.12□□□□□ -0.47
TTC28-AS1-221ENST00000540665 PRSS54Q6PEW0 395 aa12.12□□□□□ -0.47
TTC28-AS1-221ENST00000540665 LINC00322Q6ZN03 302 aaPredicted RBP12.12□□□□□ -0.47
TTC28-AS1-221ENST00000540665 C20orf85Q9H1P6 137 aa12.12□□□□□ -0.47
TTC28-AS1-221ENST00000540665 TUBA4BQ9H853 241 aa12.12□□□□□ -0.47
TTC28-AS1-221ENST00000540665 ZMAT4Q9H898 229 aa12.12□□□□□ -0.47
TTC28-AS1-221ENST00000540665 PUS1Q9Y606 427 aaKnown RBP eCLIP12.12□□□□□ -0.47
TTC28-AS1-221ENST00000540665 OR11H12B2RN74 326 aa12.11□□□□□ -0.47
TTC28-AS1-221ENST00000540665 CHEK1O14757 476 aa12.11□□□□□ -0.47
TTC28-AS1-221ENST00000540665 ZNF207O43670 478 aaKnown RBP12.11□□□□□ -0.47
TTC28-AS1-221ENST00000540665 IGKV1-17P01599 117 aa12.11□□□□□ -0.47
TTC28-AS1-221ENST00000540665 CD5P06127 495 aa12.11□□□□□ -0.47
TTC28-AS1-221ENST00000540665 IGLC1P0CG04 106 aa12.11□□□□□ -0.47
TTC28-AS1-221ENST00000540665 MLANAQ16655 118 aa12.11□□□□□ -0.47
TTC28-AS1-221ENST00000540665 OR1S2Q8NGQ3 325 aa12.11□□□□□ -0.47
TTC28-AS1-221ENST00000540665 WWC2-AS2Q96NR7 200 aa12.11□□□□□ -0.47
TTC28-AS1-221ENST00000540665 CIB3Q96Q77 187 aaPredicted RBP12.11□□□□□ -0.47
TTC28-AS1-221ENST00000540665 RHPN1-AS1Q9BWJ2 59 aa12.11□□□□□ -0.47
TTC28-AS1-221ENST00000540665 WDR12Q9GZL7 423 aaKnown RBP12.11□□□□□ -0.47
TTC28-AS1-221ENST00000540665 SELENOKQ9Y6D0 94 aa12.11□□□□□ -0.47
TTC28-AS1-221ENST00000540665 ANXA7P20073 488 aaKnown RBP12.1□□□□□ -0.47
TTC28-AS1-221ENST00000540665 RND2P52198 227 aa12.1□□□□□ -0.47
TTC28-AS1-221ENST00000540665 YPEL3P61236 119 aaPredicted RBP12.1□□□□□ -0.47
TTC28-AS1-221ENST00000540665 C4orf46Q504U0 113 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms