RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 MRPL27Q9P0M9 148 aaKnown RBP7.21□□□□□ -1.26
DDB1-217ENST00000540166 F8P00451 2351 aa7.21□□□□□ -1.26
DDB1-217ENST00000540166 MTORP42345 2549 aa7.21□□□□□ -1.26
DDB1-217ENST00000540166 HIVEP2P31629 2446 aa7.21□□□□□ -1.26
DDB1-217ENST00000540166 REG1AP05451 166 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 OR5AL1P0C617 328 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 TCTAP57738 103 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 CKS1BP61024 79 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 TMEM97Q5BJF2 176 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 FAM214BQ7L5A3 538 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 ZIC4Q8N9L1 334 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 C5orf17Q8NAS9 161 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 GALMQ96C23 342 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 PMCHL2Q9BQD1 86 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 FRYQ5TBA9 3013 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 K7EQM0 130 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 NBEAP1P0C6P0 100 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 PTGDSP41222 190 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 NHLRC2Q8NBF2 726 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 NABP1Q96AH0 204 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 HSD17B10Q99714 261 aaKnown RBP7.2□□□□□ -1.26
DDB1-217ENST00000540166 SRXN1Q9BYN0 137 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 DUSP13Q9UII6 198 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 HILPDAQ9Y5L2 63 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 JMJD1CQ15652 2540 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 MGAQ8IWI9 3026 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 DNAH14Q0VDD8 3507 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 SYNGR3O43761 229 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 IGHG3P01860 377 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 DRAM1Q8N682 238 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 SLC25A40Q8TBP6 338 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 CLUHP3Q96NS8 147 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 SF3B5Q9BWJ5 86 aaKnown RBP7.2□□□□□ -1.26
DDB1-217ENST00000540166 OSTCQ9NRP0 149 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 SPRR3Q9UBC9 169 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 IZUMO1RA6ND01 250 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 M0R1B8 84 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 FAM27E3Q08E93 113 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 RSPO1Q2MKA7 263 aaPredicted RBP7.2□□□□□ -1.26
DDB1-217ENST00000540166 SPATA46Q5T0L3 261 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 TMEM136Q6ZRR5 245 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 OR5A1Q8NGJ0 315 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 ZNF355PQ9NSJ1 428 aa7.2□□□□□ -1.26
DDB1-217ENST00000540166 YTHDF2Q9Y5A9 579 aaKnown RBP7.2□□□□□ -1.26
DDB1-217ENST00000540166 CGAP01215 116 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 SSTR5P35346 364 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 MTURNQ8N3F0 131 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 RPRMLQ8N4K4 120 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 C18orf32Q8TCD1 76 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 NPVFQ9HCQ7 196 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 SAA2-SAA4A0A096LPE2 208 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 TRAV8-6A0A0B4J262 113 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 SYNGR1O43759 233 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 CA1P00915 261 aaPredicted RBP7.19□□□□□ -1.26
DDB1-217ENST00000540166 LIPFP07098 398 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 AZU1P20160 251 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 RTL8BQ17RB0 113 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 TEPPQ6URK8 271 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 C9orf106Q8NAJ2 232 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 ADTRPQ96IZ2 230 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 SSBP4Q9BWG4 385 aaPredicted RBP7.19□□□□□ -1.26
DDB1-217ENST00000540166 RNF114Q9Y508 228 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 KMT2BQ9UMN6 2715 aaPredicted RBP7.19□□□□□ -1.26
DDB1-217ENST00000540166 A0A0G2JLM5 398 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 hCG_38984A0A1B0GV85 526 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 C9JCJ5 164 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 GRPP07492 148 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 STAG3L2P0CL84 134 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 STAG3L3P0CL85 134 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 CSN1S1P47710 185 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 ZNF137PP52743 207 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 PRSS3P2Q8NHM4 247 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 ATP6V0BQ99437 205 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 GNG12Q9UBI6 72 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 WDR83OSQ9Y284 106 aa7.19□□□□□ -1.26
DDB1-217ENST00000540166 TRGV10A0A0A0MS01 117 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 ZIC3O60481 467 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 OPRK1P41145 380 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 FADS6Q8N9I5 356 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 RAB1CQ92928 201 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 IGLV3-32A0A0A0MS00 114 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 ADH4P08319 380 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 FRMD6-AS1P0C7T7 363 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 GNG3P63215 75 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 SRSF1Q07955 248 aaKnown RBP eCLIP7.18□□□□□ -1.26
DDB1-217ENST00000540166 ZNF788Q6ZQV5 615 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 FGFBP3Q8TAT2 258 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 PRRC2CQ9Y520 2896 aaKnown RBP7.18□□□□□ -1.26
DDB1-217ENST00000540166 TRBV20OR9-2A0A075B6H5 130 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 SYS1-DBNDD2H3BUS1 97 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 RAMP3O60896 148 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 FCGR3BO75015 233 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 LYZL6O75951 148 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 NGFP01138 241 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 IGLC1P0CG04 106 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 CRYGSP22914 178 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 LINC00310P59036 64 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 PLPPR2Q96GM1 343 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 C5orf30Q96GV9 206 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 THYN1Q9P016 225 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms