RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 SRSF8Q9BRL6 282 aaKnown RBP17.81■□□□□ 0.44
HOMER3-204ENST00000539827 PUS1Q9Y606 427 aaKnown RBP eCLIP17.81■□□□□ 0.44
HOMER3-204ENST00000539827 IGKV1D-37A0A075B6S9 117 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 M0R036 132 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 STAG3L2P0CL84 134 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 STAG3L3P0CL85 134 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 PSMB3P49720 205 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 CX3CL1P78423 397 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 BRD3OSQ6XYD6 125 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 PAGE4O60829 102 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 MT-CO2P00403 227 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 ARL14EPLP0DKL9 152 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 SLC25A16P16260 332 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 CBLN2Q8IUK8 224 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 THAP8Q8NA92 274 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 MANBALQ9NQG1 85 aa17.8■□□□□ 0.44
HOMER3-204ENST00000539827 ASH1LQ9NR48 2969 aaKnown RBP17.8■□□□□ 0.44
HOMER3-204ENST00000539827 HELZ2Q9BYK8 2649 aaKnown RBP17.79■□□□□ 0.44
HOMER3-204ENST00000539827 CTRB1P17538 263 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 ZNF90Q03938 601 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 FAM78BQ5VT40 261 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 CTRB2Q6GPI1 263 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 ZNF562Q6V9R5 426 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 MIR17HGQ75NE6 70 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 Q8N9W7 124 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 LRRK2Q5S007 2527 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 CORTO00230 105 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 AKR1C3P42330 323 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 CD81P60033 236 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 NDPQ00604 133 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 AWAT1Q58HT5 328 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 ARPC1AQ92747 370 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 C7orf69Q9H7B7 122 aa17.79■□□□□ 0.44
HOMER3-204ENST00000539827 GCN1Q92616 2671 aaKnown RBP17.78■□□□□ 0.44
HOMER3-204ENST00000539827 TCRBV4S1A1TA0A5B7 111 aa17.78■□□□□ 0.44
HOMER3-204ENST00000539827 IGHV4-38-2P0DP08 117 aa17.78■□□□□ 0.44
HOMER3-204ENST00000539827 UBE2G2P60604 165 aa17.78■□□□□ 0.44
HOMER3-204ENST00000539827 MEF2BQ02080 365 aaPredicted RBP17.78■□□□□ 0.44
HOMER3-204ENST00000539827 SMCO4Q9NRQ5 59 aa17.78■□□□□ 0.44
HOMER3-204ENST00000539827 CXorf1O96002 111 aa17.77■□□□□ 0.44
HOMER3-204ENST00000539827 TMEM249Q2WGJ8 235 aa17.77■□□□□ 0.44
HOMER3-204ENST00000539827 FAM90A2PQ658T7 463 aa17.77■□□□□ 0.44
HOMER3-204ENST00000539827 SPNS3Q6ZMD2 512 aa17.77■□□□□ 0.44
HOMER3-204ENST00000539827 HIF1ANQ9NWT6 349 aa17.77■□□□□ 0.44
HOMER3-204ENST00000539827 C1RLQ9NZP8 487 aa17.77■□□□□ 0.44
HOMER3-204ENST00000539827 FUT9Q9Y231 359 aa17.77■□□□□ 0.44
HOMER3-204ENST00000539827 B4DSR2 109 aa17.77■□□□□ 0.43
HOMER3-204ENST00000539827 H3BQ15 152 aa17.77■□□□□ 0.43
HOMER3-204ENST00000539827 ASPHD1Q5U4P2 390 aa17.77■□□□□ 0.43
HOMER3-204ENST00000539827 OR4F5Q8NH21 305 aa17.77■□□□□ 0.43
HOMER3-204ENST00000539827 OR4F4Q96R69 305 aa17.77■□□□□ 0.43
HOMER3-204ENST00000539827 RPS10P5Q9NQ39 176 aa17.77■□□□□ 0.43
HOMER3-204ENST00000539827 DOK5Q9P104 306 aa17.77■□□□□ 0.43
HOMER3-204ENST00000539827 SOX21Q9Y651 276 aaPredicted RBP17.77■□□□□ 0.43
HOMER3-204ENST00000539827 PLA2G2AP14555 144 aa17.76■□□□□ 0.43
HOMER3-204ENST00000539827 KLF17Q5JT82 389 aaPredicted RBP17.76■□□□□ 0.43
HOMER3-204ENST00000539827 C22orf15Q8WYQ4 148 aa17.76■□□□□ 0.43
HOMER3-204ENST00000539827 GSX1Q9H4S2 264 aaPredicted RBP17.76■□□□□ 0.43
HOMER3-204ENST00000539827 TNFRSF19Q9NS68 423 aa17.76■□□□□ 0.43
HOMER3-204ENST00000539827 A0A0U1RQK1 487 aa17.75■□□□□ 0.43
HOMER3-204ENST00000539827 I3L2K1 104 aa17.75■□□□□ 0.43
HOMER3-204ENST00000539827 GCHFRP30047 84 aa17.75■□□□□ 0.43
HOMER3-204ENST00000539827 TMEM37Q8WXS4 190 aa17.75■□□□□ 0.43
HOMER3-204ENST00000539827 RASL11BQ9BPW5 248 aa17.75■□□□□ 0.43
HOMER3-204ENST00000539827 FASNP49327 2511 aaKnown RBP17.75■□□□□ 0.43
HOMER3-204ENST00000539827 A0A096LNT2 108 aa17.75■□□□□ 0.43
HOMER3-204ENST00000539827 IGHV7-81A0A0B4J1V7 117 aa17.75■□□□□ 0.43
HOMER3-204ENST00000539827 C7orf77A4D0Y5 90 aa17.75■□□□□ 0.43
HOMER3-204ENST00000539827 MAPK1IP1LQ8NDC0 245 aa17.75■□□□□ 0.43
HOMER3-204ENST00000539827 MLXQ9UH92 298 aa17.75■□□□□ 0.43
HOMER3-204ENST00000539827 CRYBG3Q68DQ2 2970 aa17.74■□□□□ 0.43
HOMER3-204ENST00000539827 OR5G3P0C626 314 aa17.74■□□□□ 0.43
HOMER3-204ENST00000539827 TAGLN2P37802 199 aaKnown RBP17.74■□□□□ 0.43
HOMER3-204ENST00000539827 KIAA0141Q14154 515 aaPredicted RBP17.74■□□□□ 0.43
HOMER3-204ENST00000539827 TMEM116Q8NCL8 245 aa17.74■□□□□ 0.43
HOMER3-204ENST00000539827 PSMB11A5LHX3 300 aa17.73■□□□□ 0.43
HOMER3-204ENST00000539827 ATP5G3P48201 142 aa17.73■□□□□ 0.43
HOMER3-204ENST00000539827 CST9LP1Q5W188 147 aa17.73■□□□□ 0.43
HOMER3-204ENST00000539827 OR4X1Q8NH49 305 aa17.73■□□□□ 0.43
HOMER3-204ENST00000539827 TRGV9Q99603 122 aa17.73■□□□□ 0.43
HOMER3-204ENST00000539827 HSPB9Q9BQS6 159 aa17.73■□□□□ 0.43
HOMER3-204ENST00000539827 C11orf94C9JXX5 98 aa17.73■□□□□ 0.43
HOMER3-204ENST00000539827 AVPP01185 164 aa17.73■□□□□ 0.43
HOMER3-204ENST00000539827 EGR2P11161 476 aaPredicted RBP17.73■□□□□ 0.43
HOMER3-204ENST00000539827 RHEBQ15382 184 aa17.73■□□□□ 0.43
HOMER3-204ENST00000539827 C15orf54Q8N8G6 183 aa17.73■□□□□ 0.43
HOMER3-204ENST00000539827 DNAJC4Q9NNZ3 241 aa17.73■□□□□ 0.43
HOMER3-204ENST00000539827 FBN2P35556 2912 aa17.72■□□□□ 0.43
HOMER3-204ENST00000539827 SH2D7A6NKC9 451 aaPredicted RBP17.72■□□□□ 0.43
HOMER3-204ENST00000539827 K7EIM0 57 aa17.72■□□□□ 0.43
HOMER3-204ENST00000539827 COX7A2P2O60397 106 aa17.72■□□□□ 0.43
HOMER3-204ENST00000539827 SELENOTP62341 195 aa17.72■□□□□ 0.43
HOMER3-204ENST00000539827 DEFB113Q30KQ7 82 aa17.72■□□□□ 0.43
HOMER3-204ENST00000539827 PATE2Q6UY27 113 aa17.72■□□□□ 0.43
HOMER3-204ENST00000539827 NANPQ8TBE9 248 aa17.72■□□□□ 0.43
HOMER3-204ENST00000539827 NIPSNAP3BQ9BS92 247 aa17.72■□□□□ 0.43
HOMER3-204ENST00000539827 C19orf24Q9BVV8 132 aa17.72■□□□□ 0.43
HOMER3-204ENST00000539827 TECRQ9NZ01 308 aaKnown RBP17.72■□□□□ 0.43
HOMER3-204ENST00000539827 TRAV5A0A0B4J249 113 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 TRAV20A0A0B4J274 112 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms