RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TEPPQ6URK8 271 aa12.65□□□□□ -0.38
TRAF3-204ENST00000539721 TMEM144Q7Z5S9 345 aa12.65□□□□□ -0.38
TRAF3-204ENST00000539721 TMED6Q8WW62 240 aa12.65□□□□□ -0.38
TRAF3-204ENST00000539721 RSG1Q9BU20 258 aa12.65□□□□□ -0.38
TRAF3-204ENST00000539721 SLC25A32Q9H2D1 315 aa12.65□□□□□ -0.38
TRAF3-204ENST00000539721 FBXL7Q9UJT9 491 aa12.65□□□□□ -0.38
TRAF3-204ENST00000539721 MPDU1O75352 247 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 NDUFB8O95169 186 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 SPP1P10451 314 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 PPIFP30405 207 aaKnown RBP12.64□□□□□ -0.39
TRAF3-204ENST00000539721 RND2P52198 227 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 DEFA5Q01523 94 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 ACSM6Q6P461 480 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 ZNF767PQ75MW2 155 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 SCARB1Q8WTV0 552 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 NPIPB3Q92617 1050 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 MS4A10Q96PG2 267 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 NPCDR1Q9BY65 106 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 MRPL36Q9P0J6 103 aaKnown RBP12.64□□□□□ -0.39
TRAF3-204ENST00000539721 UBQLN2Q9UHD9 624 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 CRYBA1P05813 215 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 SEC11BP0C7V7 166 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 KLK9Q2XQG4 91 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 Q8N2B8 174 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 ZNF709Q8N972 641 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 KLK9Q9UKQ9 250 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 LSM4Q9Y4Z0 139 aaKnown RBP12.64□□□□□ -0.39
TRAF3-204ENST00000539721 RFNGQ9Y644 331 aa12.64□□□□□ -0.39
TRAF3-204ENST00000539721 F8P00451 2351 aa12.63□□□□□ -0.39
TRAF3-204ENST00000539721 TRBV9A0A0B4J1U6 114 aa12.63□□□□□ -0.39
TRAF3-204ENST00000539721 C17orf112F2Z3M2 114 aa12.63□□□□□ -0.39
TRAF3-204ENST00000539721 RGS13O14921 159 aa12.63□□□□□ -0.39
TRAF3-204ENST00000539721 RPL15P61313 204 aaKnown RBP12.63□□□□□ -0.39
TRAF3-204ENST00000539721 RHOGP84095 191 aa12.63□□□□□ -0.39
TRAF3-204ENST00000539721 FAM74A1Q5RGS3 127 aa12.63□□□□□ -0.39
TRAF3-204ENST00000539721 OR2G3Q8NGZ4 309 aa12.63□□□□□ -0.39
TRAF3-204ENST00000539721 MGST2Q99735 147 aa12.63□□□□□ -0.39
TRAF3-204ENST00000539721 NSD1Q96L73 2696 aaPredicted RBP12.62□□□□□ -0.39
TRAF3-204ENST00000539721 H3BUA1 57 aa12.62□□□□□ -0.39
TRAF3-204ENST00000539721 TRGV3P03979 118 aa12.62□□□□□ -0.39
TRAF3-204ENST00000539721 CAMLGP49069 296 aa12.62□□□□□ -0.39
TRAF3-204ENST00000539721 CFHR3Q02985 330 aa12.62□□□□□ -0.39
TRAF3-204ENST00000539721 RAB31Q13636 194 aa12.62□□□□□ -0.39
TRAF3-204ENST00000539721 Q6ZSV7 163 aa12.62□□□□□ -0.39
TRAF3-204ENST00000539721 NECAP1Q8NC96 275 aa12.62□□□□□ -0.39
TRAF3-204ENST00000539721 TMEM116Q8NCL8 245 aa12.62□□□□□ -0.39
TRAF3-204ENST00000539721 PSMG3Q9BT73 122 aaPredicted RBP12.62□□□□□ -0.39
TRAF3-204ENST00000539721 TIMM9Q9Y5J7 89 aa12.62□□□□□ -0.39
TRAF3-204ENST00000539721 S4R3C0 116 aa12.62□□□□□ -0.39
TRAF3-204ENST00000539721 MFSD2BA6NFX1 497 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 AGPAT2O15120 278 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 PF4V1P10720 104 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 TMEM182Q6ZP80 229 aaPredicted RBP12.61□□□□□ -0.39
TRAF3-204ENST00000539721 OR4X1Q8NH49 305 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 IGKV1OR2-108A0A075B7D4 117 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 ZFP92A6NM28 416 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 TCF21O43680 179 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 IGLV1-40P01703 118 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 OR10J1P30954 320 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 MFAP4P55083 255 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 TPPP2P59282 170 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 SLC35B1P78383 322 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 C15orf32Q32M92 178 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 ZNF329Q86UD4 541 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 THAP8Q8NA92 274 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 VN1R17PQ8TDU5 208 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 GGTLC1Q9BX51 225 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 C21orf62Q9NYP8 219 aa12.61□□□□□ -0.39
TRAF3-204ENST00000539721 FAM223BA6NKX1 122 aa12.6□□□□□ -0.39
TRAF3-204ENST00000539721 BRI3O95415 125 aa12.6□□□□□ -0.39
TRAF3-204ENST00000539721 IGHV3-23P01764 117 aa12.6□□□□□ -0.39
TRAF3-204ENST00000539721 NPBWR1P48145 328 aa12.6□□□□□ -0.39
TRAF3-204ENST00000539721 CENPVQ7Z7K6 275 aaPredicted RBP12.6□□□□□ -0.39
TRAF3-204ENST00000539721 FAM223AQ8IWN6 122 aa12.6□□□□□ -0.39
TRAF3-204ENST00000539721 CXorf58Q96LI9 332 aa12.6□□□□□ -0.39
TRAF3-204ENST00000539721 SERTAD4Q9NUC0 356 aa12.6□□□□□ -0.39
TRAF3-204ENST00000539721 PLA2G2EQ9NZK7 142 aa12.6□□□□□ -0.39
TRAF3-204ENST00000539721 FN1P02751 2386 aaKnown RBP12.59□□□□□ -0.39
TRAF3-204ENST00000539721 IGKV1D-37A0A075B6S9 117 aa12.59□□□□□ -0.39
TRAF3-204ENST00000539721 PSMB11A5LHX3 300 aa12.59□□□□□ -0.39
TRAF3-204ENST00000539721 CLN5O75503 358 aa12.59□□□□□ -0.39
TRAF3-204ENST00000539721 IGHG4P01861 327 aa12.59□□□□□ -0.39
TRAF3-204ENST00000539721 ELLP55199 621 aaPredicted RBP12.59□□□□□ -0.39
TRAF3-204ENST00000539721 ATP5G2Q06055 141 aa12.59□□□□□ -0.39
TRAF3-204ENST00000539721 Q56UQ5 140 aa12.59□□□□□ -0.39
TRAF3-204ENST00000539721 KCNIP2Q9NS61 270 aa12.59□□□□□ -0.39
TRAF3-204ENST00000539721 CUBNO60494 3623 aa12.59□□□□□ -0.39
TRAF3-204ENST00000539721 TCRBV4S1A1TA0A5B7 111 aa12.58□□□□□ -0.39
TRAF3-204ENST00000539721 SULT1A2P50226 295 aa12.58□□□□□ -0.39
TRAF3-204ENST00000539721 SERF2P84101 59 aa12.58□□□□□ -0.39
TRAF3-204ENST00000539721 FFAR4Q5NUL3 377 aa12.58□□□□□ -0.39
TRAF3-204ENST00000539721 AKR1C8PQ5T2L2 129 aa12.58□□□□□ -0.39
TRAF3-204ENST00000539721 MIC13Q5XKP0 118 aa12.58□□□□□ -0.39
TRAF3-204ENST00000539721 CYP2G1PQ6ZSU1 146 aa12.58□□□□□ -0.39
TRAF3-204ENST00000539721 RNF141Q8WVD5 230 aa12.58□□□□□ -0.39
TRAF3-204ENST00000539721 EEF1AKMT3Q96AZ1 226 aa12.58□□□□□ -0.39
TRAF3-204ENST00000539721 PXMP4Q9Y6I8 212 aa12.58□□□□□ -0.39
TRAF3-204ENST00000539721 TMEM89A2RUT3 159 aa12.58□□□□□ -0.4
TRAF3-204ENST00000539721 GNG7O60262 68 aa12.58□□□□□ -0.4
TRAF3-204ENST00000539721 RPL29P47914 159 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms