RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 MOB3BQ86TA1 216 aa10.76□□□□□ -0.69
UBE3B-209ENST00000539584 TXN2Q99757 166 aa10.76□□□□□ -0.69
UBE3B-209ENST00000539584 H0YJW9 148 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 NKX2-8O15522 239 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 HYPMO75409 117 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 HSBP1O75506 76 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 IGHV1-46P01743 117 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 HNRNPA3P51991 378 aaKnown RBP10.75□□□□□ -0.69
UBE3B-209ENST00000539584 CT83Q5H943 113 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 ZNF329Q86UD4 541 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 SPACA3Q8IXA5 215 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 ZNF355PQ9NSJ1 428 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 CBY1Q9Y3M2 126 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 SFTPCP11686 197 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 TNFRSF1AP19438 455 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 MFAP2P55001 183 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 SLC35B1P78383 322 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 SEM1Q6ZVN7 128 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 LINC00311Q8N616 119 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 NUP35Q8NFH5 326 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 NUDT10Q8NFP7 164 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 TMEM186Q96B77 213 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 FAM122AQ96E09 287 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 NUDT11Q96G61 164 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 CCL13Q99616 98 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 LAMTOR2Q9Y2Q5 125 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 KLF12Q9Y4X4 402 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 RNF114Q9Y508 228 aa10.75□□□□□ -0.69
UBE3B-209ENST00000539584 MYCNOSP40205 109 aa10.74□□□□□ -0.69
UBE3B-209ENST00000539584 SLAQ13239 276 aa10.74□□□□□ -0.69
UBE3B-209ENST00000539584 ZNF474Q6S9Z5 364 aaPredicted RBP10.74□□□□□ -0.69
UBE3B-209ENST00000539584 Q6ZN92 141 aa10.74□□□□□ -0.69
UBE3B-209ENST00000539584 NUP37Q8NFH4 326 aa10.74□□□□□ -0.69
UBE3B-209ENST00000539584 ZNF596Q8TC21 504 aa10.74□□□□□ -0.69
UBE3B-209ENST00000539584 UBE2G1P62253 170 aa10.74□□□□□ -0.69
UBE3B-209ENST00000539584 FAM201AQ5SY85 155 aa10.74□□□□□ -0.69
UBE3B-209ENST00000539584 ORAOV1Q8WV07 137 aa10.74□□□□□ -0.69
UBE3B-209ENST00000539584 SNRNP40Q96DI7 357 aaKnown RBP10.74□□□□□ -0.69
UBE3B-209ENST00000539584 PERPQ96FX8 193 aa10.74□□□□□ -0.69
UBE3B-209ENST00000539584 C1RLQ9NZP8 487 aa10.74□□□□□ -0.69
UBE3B-209ENST00000539584 TRAV9-2A0A087WT02 112 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 FAM231BA6NCW3 169 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 CEACAM4O75871 244 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 NPSP0C0P6 89 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 CHRNB4P30926 498 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 BATFQ16520 125 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 MLANAQ16655 118 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 VHLLQ6RSH7 139 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 ZCCHC24Q8N2G6 241 aaKnown RBP10.73□□□□□ -0.69
UBE3B-209ENST00000539584 ZADH2Q8N4Q0 377 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 RBMXL3Q8N7X1 1067 aaKnown RBP10.73□□□□□ -0.69
UBE3B-209ENST00000539584 OR10W1Q8NGF6 305 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 OR8B3Q8NGG8 313 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 OR2T6Q8NHC8 308 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 FXYD5Q96DB9 178 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 GPR82Q96P67 336 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 OR8B2Q96RD0 313 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 ALKBH7Q9BT30 221 aaPredicted RBP10.73□□□□□ -0.69
UBE3B-209ENST00000539584 GFRA4Q9GZZ7 299 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 DCAF16Q9NXF7 216 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 EPDR1Q9UM22 224 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 KNTC1P50748 2209 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 FREM2Q5SZK8 3169 aa10.73□□□□□ -0.69
UBE3B-209ENST00000539584 A0A1B0GXF2 115 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 A6NNC1 897 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 MC5RP33032 325 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 MMDQ15546 238 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 PVRIGQ6DKI7 326 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 FAM216BQ8N7L0 139 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 OR10X1Q8NGY0 326 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 CLEC7AQ9BXN2 247 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 MRPL20Q9BYC9 149 aaKnown RBP10.72□□□□□ -0.69
UBE3B-209ENST00000539584 C7orf69Q9H7B7 122 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 DSCAML1Q8TD84 2053 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 TRAV5A0A0B4J249 113 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 FAM181BA6NEQ2 426 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 A8MWL6 223 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 M0R2Z0 102 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 FSTL3O95633 263 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 NTF3P20783 257 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 ZNF137PP52743 207 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 TNXAQ16473 311 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 DUX4L9Q6RFH8 374 aaPredicted RBP10.72□□□□□ -0.69
UBE3B-209ENST00000539584 SSX8Q7RTT4 187 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 DEFB108BQ8NET1 73 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 C22orf15Q8WYQ4 148 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 FAM168AQ92567 244 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 CHCHD1Q96BP2 118 aaKnown RBP10.72□□□□□ -0.69
UBE3B-209ENST00000539584 FMC1Q96HJ9 113 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 ZNF492Q9P255 531 aa10.72□□□□□ -0.69
UBE3B-209ENST00000539584 TECTAO75443 2155 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 TANC2Q9HCD6 1990 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 HIGD1CA8MV81 97 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 M0R296 226 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 CRXO43186 299 aaPredicted RBP10.71□□□□□ -0.69
UBE3B-209ENST00000539584 TSPOP30536 169 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 LGALS7P47929 136 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 PAX2Q02962 417 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 VMA21Q3ZAQ7 101 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 MORN5Q5VZ52 161 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms