RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 COA5Q86WW8 74 aa2.35□□□□□ -2.03
TRAV11-201ENST00000539512 GPHB5Q86YW7 130 aa2.35□□□□□ -2.03
TRAV11-201ENST00000539512 ZNF563Q8TA94 476 aa2.35□□□□□ -2.03
TRAV11-201ENST00000539512 HAVCR2Q8TDQ0 301 aa2.35□□□□□ -2.03
TRAV11-201ENST00000539512 GNPNAT1Q96EK6 184 aaPredicted RBP2.35□□□□□ -2.03
TRAV11-201ENST00000539512 TTTY13Q9BZ97 58 aa2.35□□□□□ -2.03
TRAV11-201ENST00000539512 HRASLSQ9HDD0 168 aa2.35□□□□□ -2.03
TRAV11-201ENST00000539512 UBAP1Q9NZ09 502 aa2.35□□□□□ -2.03
TRAV11-201ENST00000539512 USE1Q9NZ43 259 aa2.35□□□□□ -2.03
TRAV11-201ENST00000539512 ROCK2O75116 1388 aaKnown RBP2.35□□□□□ -2.03
TRAV11-201ENST00000539512 NAV3Q8IVL0 2385 aa2.35□□□□□ -2.03
TRAV11-201ENST00000539512 IBTKQ9P2D0 1353 aaPredicted RBP2.35□□□□□ -2.03
TRAV11-201ENST00000539512 SCN9AQ15858 1988 aa2.34□□□□□ -2.03
TRAV11-201ENST00000539512 COL4A2P08572 1712 aa2.34□□□□□ -2.03
TRAV11-201ENST00000539512 ICE1Q9Y2F5 2266 aa2.34□□□□□ -2.03
TRAV11-201ENST00000539512 HAAOP46952 286 aa2.34□□□□□ -2.03
TRAV11-201ENST00000539512 ZNF791Q3KP31 576 aaPredicted RBP2.34□□□□□ -2.03
TRAV11-201ENST00000539512 OGFRL1Q5TC84 451 aaPredicted RBP2.34□□□□□ -2.03
TRAV11-201ENST00000539512 TMEM42Q69YG0 159 aa2.34□□□□□ -2.03
TRAV11-201ENST00000539512 C5orf46Q6UWT4 87 aa2.34□□□□□ -2.03
TRAV11-201ENST00000539512 COMMD7Q86VX2 200 aa2.34□□□□□ -2.03
TRAV11-201ENST00000539512 OR2T27Q8NH04 317 aa2.34□□□□□ -2.03
TRAV11-201ENST00000539512 RNASE6Q93091 150 aaKnown RBP2.34□□□□□ -2.03
TRAV11-201ENST00000539512 TRIM4Q9C037 500 aa2.34□□□□□ -2.03
TRAV11-201ENST00000539512 NKIRAS1Q9NYS0 192 aa2.34□□□□□ -2.03
TRAV11-201ENST00000539512 ATP6V1DQ9Y5K8 247 aa2.34□□□□□ -2.03
TRAV11-201ENST00000539512 SETD2Q9BYW2 2564 aaPredicted RBP2.34□□□□□ -2.04
TRAV11-201ENST00000539512 OTOGLQ3ZCN5 2332 aa2.33□□□□□ -2.04
TRAV11-201ENST00000539512 BRWD1Q9NSI6 2320 aa2.33□□□□□ -2.04
TRAV11-201ENST00000539512 TMEM269A0A1B0GVZ9 245 aa2.33□□□□□ -2.04
TRAV11-201ENST00000539512 COX7A2LO14548 114 aa2.33□□□□□ -2.04
TRAV11-201ENST00000539512 MAGEA12P43365 314 aa2.33□□□□□ -2.04
TRAV11-201ENST00000539512 SLC36A2Q495M3 483 aa2.33□□□□□ -2.04
TRAV11-201ENST00000539512 SAPCD1Q5SSQ6 148 aa2.33□□□□□ -2.04
TRAV11-201ENST00000539512 TBC1D19Q8N5T2 526 aa2.33□□□□□ -2.04
TRAV11-201ENST00000539512 PIGXQ8TBF5 258 aa2.33□□□□□ -2.04
TRAV11-201ENST00000539512 DDI1Q8WTU0 396 aa2.33□□□□□ -2.04
TRAV11-201ENST00000539512 NAA38Q9BRA0 125 aaKnown RBP2.33□□□□□ -2.04
TRAV11-201ENST00000539512 OR51I2Q9H344 312 aa2.33□□□□□ -2.04
TRAV11-201ENST00000539512 FAM96AQ9H5X1 160 aa2.33□□□□□ -2.04
TRAV11-201ENST00000539512 MED23Q9ULK4 1368 aa2.33□□□□□ -2.04
TRAV11-201ENST00000539512 OTOFQ9HC10 1997 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 LRRC37AA6NMS7 1700 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 A0A0J9YW62 118 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 ZNF705FA8MVS1 300 aaPredicted RBP2.32□□□□□ -2.04
TRAV11-201ENST00000539512 SLC16A4O15374 487 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 E2F6O75461 281 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 DEXIO95424 95 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 HLA-DRAP01903 254 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 TPI1P60174 286 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 RSU1Q15404 277 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 LRRC75BQ2VPJ9 315 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 C9orf64Q5T6V5 341 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 KTN1-AS1Q86SY8 53 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 OR1L8Q8NGR8 309 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 IMMP2LQ96T52 175 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 CXorf21Q9HAI6 301 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 GPR84Q9NQS5 396 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 CREBBPQ92793 2442 aa2.32□□□□□ -2.04
TRAV11-201ENST00000539512 MEIKINA0A087WXM9 373 aa2.31□□□□□ -2.04
TRAV11-201ENST00000539512 DISC1C4P0D8 188 aa2.31□□□□□ -2.04
TRAV11-201ENST00000539512 M0QZ92 97 aa2.31□□□□□ -2.04
TRAV11-201ENST00000539512 COX5BP10606 129 aa2.31□□□□□ -2.04
TRAV11-201ENST00000539512 RPL12P30050 165 aaKnown RBP2.31□□□□□ -2.04
TRAV11-201ENST00000539512 MAGEA2P43356 314 aa2.31□□□□□ -2.04
TRAV11-201ENST00000539512 RPL30P62888 115 aaKnown RBP2.31□□□□□ -2.04
TRAV11-201ENST00000539512 MLLT11Q13015 90 aaPredicted RBP2.31□□□□□ -2.04
TRAV11-201ENST00000539512 RNF133Q8WVZ7 376 aa2.31□□□□□ -2.04
TRAV11-201ENST00000539512 ARL5BQ96KC2 179 aa2.31□□□□□ -2.04
TRAV11-201ENST00000539512 MRPL32Q9BYC8 188 aaKnown RBP2.31□□□□□ -2.04
TRAV11-201ENST00000539512 VCX3BQ9H321 246 aa2.31□□□□□ -2.04
TRAV11-201ENST00000539512 CST9LQ9H4G1 147 aa2.31□□□□□ -2.04
TRAV11-201ENST00000539512 ZFHX3Q15911 3703 aa2.3□□□□□ -2.04
TRAV11-201ENST00000539512 HMSDA8MTL9 139 aa2.3□□□□□ -2.04
TRAV11-201ENST00000539512 C8orf88P0DMB2 117 aa2.3□□□□□ -2.04
TRAV11-201ENST00000539512 HIST1H4AP62805 103 aaKnown RBP2.3□□□□□ -2.04
TRAV11-201ENST00000539512 FABP9Q0Z7S8 132 aa2.3□□□□□ -2.04
TRAV11-201ENST00000539512 LRRN1Q6UXK5 716 aa2.3□□□□□ -2.04
TRAV11-201ENST00000539512 TMEM161BQ8NDZ6 487 aa2.3□□□□□ -2.04
TRAV11-201ENST00000539512 AK3Q9UIJ7 227 aa2.3□□□□□ -2.04
TRAV11-201ENST00000539512 ANAPC10Q9UM13 185 aa2.3□□□□□ -2.04
TRAV11-201ENST00000539512 PRELID1Q9Y255 219 aa2.3□□□□□ -2.04
TRAV11-201ENST00000539512 TLN1Q9Y490 2541 aaKnown RBP2.3□□□□□ -2.04
TRAV11-201ENST00000539512 UTP20O75691 2785 aaKnown RBP2.29□□□□□ -2.04
TRAV11-201ENST00000539512 NBEAL1Q6ZS30 2694 aa2.29□□□□□ -2.04
TRAV11-201ENST00000539512 ATAD5Q96QE3 1844 aa2.29□□□□□ -2.04
TRAV11-201ENST00000539512 TRAV38-1A0A0B4J264 116 aa2.29□□□□□ -2.04
TRAV11-201ENST00000539512 IGHV1-69-2A0A0G2JMI3 117 aa2.29□□□□□ -2.04
TRAV11-201ENST00000539512 LRRN3E7EW58 273 aa2.29□□□□□ -2.04
TRAV11-201ENST00000539512 NAPSAO96009 420 aa2.29□□□□□ -2.04
TRAV11-201ENST00000539512 MYL12AP19105 171 aa2.29□□□□□ -2.04
TRAV11-201ENST00000539512 TMEM155Q4W5P6 130 aa2.29□□□□□ -2.04
TRAV11-201ENST00000539512 Q6ZSA8 131 aa2.29□□□□□ -2.04
TRAV11-201ENST00000539512 SLC22A24Q8N4F4 322 aa2.29□□□□□ -2.04
TRAV11-201ENST00000539512 PARVGQ9HBI0 331 aa2.29□□□□□ -2.04
TRAV11-201ENST00000539512 XAGE1AQ9HD64 81 aa2.29□□□□□ -2.04
TRAV11-201ENST00000539512 LAMB1P07942 1786 aa2.28□□□□□ -2.04
TRAV11-201ENST00000539512 DDX60Q8IY21 1712 aaKnown RBP2.28□□□□□ -2.04
TRAV11-201ENST00000539512 H0Y980 276 aa2.28□□□□□ -2.04
TRAV11-201ENST00000539512 H3BT86 120 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms