RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 RRN3P1Q2M238 152 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 LINC01554Q52M75 96 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 SAMD13Q5VXD3 122 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 MIR17HGQ75NE6 70 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 CROCCP2Q86T23 111 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 OR5J2Q8NH18 312 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 TERB2Q8NHR7 220 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 PLEKHB2Q96CS7 222 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 SCGB3A1Q96QR1 104 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 AIF1LQ9BQI0 150 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 TM2D3Q9BRN9 247 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 EFCAB11Q9BUY7 163 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 CCDC32Q9BV29 185 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 OR2J1Q9GZK6 312 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 OSTCQ9NRP0 149 aa1.62□□□□□ -2.15
SNHG1-210ENST00000539303 ZCCHC6Q5VYS8 1495 aaKnown RBP1.62□□□□□ -2.15
SNHG1-210ENST00000539303 SCN9AQ15858 1988 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 SHROOM3Q8TF72 1996 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 NACADO15069 1562 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 UHRF1BP1Q6BDS2 1440 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 TRAV7A0A075B6U4 112 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 A0A087X0T9 212 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 IGKV2-24A0A0C4DH68 120 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 H7C2G1 150 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 TAX1BP3O14907 124 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 NFYBP25208 207 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 SRP14P37108 136 aaKnown RBP1.61□□□□□ -2.15
SNHG1-210ENST00000539303 EIF5AP63241 154 aaKnown RBP1.61□□□□□ -2.15
SNHG1-210ENST00000539303 SUPT4H1P63272 117 aaKnown RBP1.61□□□□□ -2.15
SNHG1-210ENST00000539303 SURF2Q15527 256 aaPredicted RBP1.61□□□□□ -2.15
SNHG1-210ENST00000539303 AGTRAPQ6RW13 159 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 LYZL1Q6UWQ5 148 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 KTN1-AS1Q86SY8 53 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 HIST3H2BBQ8N257 126 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 RPP25LQ8N5L8 163 aaKnown RBP1.61□□□□□ -2.15
SNHG1-210ENST00000539303 LINC00304Q8N9R0 145 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 TMEM35BQ8NCS4 154 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 OR4C16Q8NGL9 310 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 STAG3L4Q8TBR4 150 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 WFDC5Q8TCV5 224 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 TMEM106AQ96A25 262 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 SLAMF6Q96DU3 332 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 DNAJC30Q96LL9 226 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 PKMYT1Q99640 499 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 TUBA4BQ9H853 241 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 HHLA3Q9XRX5 114 aa1.61□□□□□ -2.15
SNHG1-210ENST00000539303 DOCK4Q8N1I0 1966 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 A0A1W2PNN7 141 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 RFPL4AA6NLU0 287 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 RFPL4AL1F8VTS6 287 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 IGKV1-16P04430 117 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 NFYAP23511 347 aaPredicted RBP1.6□□□□□ -2.15
SNHG1-210ENST00000539303 HINT1P49773 126 aaPredicted RBP1.6□□□□□ -2.15
SNHG1-210ENST00000539303 IGFBP7Q16270 282 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 KHDC3LQ587J8 217 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 PABPC1L2AQ5JQF8 200 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 BCL2L15Q5TBC7 163 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 TOMM20LQ6UXN7 152 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 DPPA3Q6W0C5 159 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 TCF24Q7RTU0 167 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 DYNAPQ8N1N2 210 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 SIGLECL1Q8N7X8 197 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 ST6GALNAC3Q8NDV1 305 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 NUP35Q8NFH5 326 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 OR10J5Q8NHC4 309 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 DCANP1Q8TF63 244 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 MAFIPQ8WZ33 124 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 MRPS24Q96EL2 167 aaKnown RBP1.6□□□□□ -2.15
SNHG1-210ENST00000539303 ZNF471Q9BX82 626 aaPredicted RBP1.6□□□□□ -2.15
SNHG1-210ENST00000539303 RNF122Q9H9V4 155 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 LRTM1Q9HBL6 345 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 ARHGAP32A7KAX9 2087 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 WDR90Q96KV7 1748 aa1.6□□□□□ -2.15
SNHG1-210ENST00000539303 MYO16Q9Y6X6 1858 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 IGLV10-54A0A075B6I4 117 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 IGHV1-18A0A0C4DH31 117 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 IGKV1-9A0A0C4DH69 117 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 PRORSD1PA6NEY8 169 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 M0R378 163 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 OR2T1O43869 369 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 RELAQ04206 551 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 FAM27BQ5VT28 67 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 PP632Q6XCG6 107 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 IFT20Q8IY31 132 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 TMEM86AQ8N2M4 240 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 OR4X2Q8NGF9 303 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 OR5A1Q8NGJ0 315 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 PFN4Q8NHR9 129 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 PPTC7Q8NI37 304 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 C11orf40Q8WZ69 217 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 LAMTOR3Q9UHA4 124 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 OR52A1Q9UKL2 312 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 ASB4Q9Y574 426 aa1.59□□□□□ -2.15
SNHG1-210ENST00000539303 OBSL1O75147 1896 aa1.58□□□□□ -2.16
SNHG1-210ENST00000539303 SETD5Q9C0A6 1442 aa1.58□□□□□ -2.16
SNHG1-210ENST00000539303 DENND4CQ5VZ89 1909 aa1.58□□□□□ -2.16
SNHG1-210ENST00000539303 UBR2Q8IWV8 1755 aa1.58□□□□□ -2.16
SNHG1-210ENST00000539303 TOPBP1Q92547 1522 aa1.58□□□□□ -2.16
SNHG1-210ENST00000539303 IGHV3-64A0A075B6Q5 118 aa1.58□□□□□ -2.16
SNHG1-210ENST00000539303 A0A0D9SEW6 157 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms