RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 HIGD1CA8MV81 97 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 PEX7O00628 323 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 PRCDQ00LT1 54 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 C19orf24Q9BVV8 132 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 SCGB2A1O75556 95 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 TNFSF13O75888 250 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 CD69Q07108 199 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 LCN12Q6JVE5 192 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 SNRNP40Q96DI7 357 aaKnown RBP12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 KCNS1Q96KK3 526 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 RASL11BQ9BPW5 248 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 TMEM191AQ9H0A3 160 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 TEX50A0A1B0GTY4 177 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 VDAC2P45880 294 aaPredicted RBP12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 TBR1Q16650 682 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 LEMD1Q68G75 181 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 CENPVQ7Z7K6 275 aaPredicted RBP12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 C11orf53Q8IXP5 236 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 OSTCQ9NRP0 149 aa12.91□□□□□ -0.34
ATP2A2-204ENST00000539276 TRAV9-1A0A075B6T8 112 aa12.9□□□□□ -0.34
ATP2A2-204ENST00000539276 MRPL32Q9BYC8 188 aaKnown RBP12.9□□□□□ -0.34
ATP2A2-204ENST00000539276 CFAP54Q96N23 3096 aa12.9□□□□□ -0.34
ATP2A2-204ENST00000539276 FAM90A9PA6NNJ1 464 aa12.9□□□□□ -0.34
ATP2A2-204ENST00000539276 ZNF324O75467 553 aaPredicted RBP12.9□□□□□ -0.34
ATP2A2-204ENST00000539276 RBPJQ06330 500 aa12.9□□□□□ -0.34
ATP2A2-204ENST00000539276 TCF24Q7RTU0 167 aa12.9□□□□□ -0.34
ATP2A2-204ENST00000539276 OSR1Q8TAX0 266 aaPredicted RBP12.9□□□□□ -0.34
ATP2A2-204ENST00000539276 ZNF596Q8TC21 504 aa12.9□□□□□ -0.34
ATP2A2-204ENST00000539276 NEU1Q99519 415 aa12.9□□□□□ -0.34
ATP2A2-204ENST00000539276 GNB1LQ9BYB4 327 aa12.9□□□□□ -0.34
ATP2A2-204ENST00000539276 LGALS4P56470 323 aa12.9□□□□□ -0.34
ATP2A2-204ENST00000539276 S100A7AQ86SG5 101 aa12.9□□□□□ -0.34
ATP2A2-204ENST00000539276 NCBP2LA6PVI3 153 aaKnown RBP12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 C15orf65H3BRN8 121 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 LEPROTL1O95214 131 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 NBEAP1P0C6P0 100 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 AREGP15514 252 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 Q6ZWC4 215 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 FOXA2Q9Y261 457 aaPredicted RBP12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 NHLH1Q02575 133 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 PMCHL1Q16048 86 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 ERASQ7Z444 233 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 TRBV20OR9-2A0A075B6H5 130 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 PMS2P5A8MQ11 134 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 F2Z2F3 143 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 OR5AL1P0C617 328 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 CD40P25942 277 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 PRRX1P54821 245 aa12.89□□□□□ -0.35
ATP2A2-204ENST00000539276 A0A1W2PRE2 83 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 C9JCJ5 164 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 MBNL2Q5VZF2 373 aaKnown RBP12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 C19orf35Q6ZS72 473 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 IZUMO1RA6ND01 250 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 DCAF16Q9NXF7 216 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 HIGD1AQ9Y241 93 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 GOLT1AQ6ZVE7 132 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 LOXL4Q96JB6 756 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 MAP1LC3CQ9BXW4 147 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 AAMDCQ9H7C9 122 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 PLSCR4Q9NRQ2 329 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 IGHV1-46P01743 117 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 COA6Q5JTJ3 125 aaKnown RBP12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 RPUSD1Q9UJJ7 312 aaKnown RBP12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 CDC42EP3Q9UKI2 254 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 RNF24Q9Y225 148 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 SLC25A15Q9Y619 301 aa12.88□□□□□ -0.35
ATP2A2-204ENST00000539276 LOC102724200A0A096LPH7 203 aaPredicted RBP12.87□□□□□ -0.35
ATP2A2-204ENST00000539276 LOC389332A0A1B0GUA5 103 aa12.87□□□□□ -0.35
ATP2A2-204ENST00000539276 WISP2O76076 250 aa12.87□□□□□ -0.35
ATP2A2-204ENST00000539276 GSX1Q9H4S2 264 aaPredicted RBP12.87□□□□□ -0.35
ATP2A2-204ENST00000539276 AARDQ4LEZ3 155 aa12.87□□□□□ -0.35
ATP2A2-204ENST00000539276 ZNF738Q8NE65 137 aa12.87□□□□□ -0.35
ATP2A2-204ENST00000539276 LAMTOR2Q9Y2Q5 125 aa12.87□□□□□ -0.35
ATP2A2-204ENST00000539276 CDX4O14627 284 aaPredicted RBP12.87□□□□□ -0.35
ATP2A2-204ENST00000539276 CX3CL1P78423 397 aa12.87□□□□□ -0.35
ATP2A2-204ENST00000539276 OR8A1Q8NGG7 326 aa12.87□□□□□ -0.35
ATP2A2-204ENST00000539276 CACNG8Q8WXS5 425 aa12.87□□□□□ -0.35
ATP2A2-204ENST00000539276 SLC25A33Q9BSK2 321 aa12.87□□□□□ -0.35
ATP2A2-204ENST00000539276 S4R3C0 116 aa12.87□□□□□ -0.35
ATP2A2-204ENST00000539276 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.87□□□□□ -0.353e-7■■■■■ 27.1
ATP2A2-204ENST00000539276 GPX1P07203 203 aa12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 TDGF1P3P51864 188 aa12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 MC5RP33032 325 aa12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 RPL15P61313 204 aaKnown RBP12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 TDRG1Q3Y452 100 aa12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 K7EN84 100 aa12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 BTF3P20290 206 aaKnown RBP12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 OR8B3Q8NGG8 313 aa12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 SRSF12Q8WXF0 261 aaKnown RBP12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 GRAMD2BQ96HH9 432 aa12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 RBM14Q96PK6 669 aaKnown RBP12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 CLEC5AQ9NY25 188 aa12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 FBXL7Q9UJT9 491 aa12.86□□□□□ -0.35
ATP2A2-204ENST00000539276 ATG2AQ2TAZ0 1938 aa12.85□□□□□ -0.35
ATP2A2-204ENST00000539276 A0A1W2PNU3 283 aaPredicted RBP12.85□□□□□ -0.35
ATP2A2-204ENST00000539276 FAM90A27PA6NNH2 459 aa12.85□□□□□ -0.35
ATP2A2-204ENST00000539276 GNG7O60262 68 aa12.85□□□□□ -0.35
ATP2A2-204ENST00000539276 CA7P43166 264 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms