RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 C18orf15Q96N68 181 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 C7orf50Q9BRJ6 194 aaKnown RBP8.56□□□□□ -1.04
YBX3-207ENST00000539204 ATG101Q9BSB4 218 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 RHBDL2Q9NX52 303 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 LYRM1O43325 122 aa8.55□□□□□ -1.04
YBX3-207ENST00000539204 IGLV2-14P01704 120 aa8.55□□□□□ -1.04
YBX3-207ENST00000539204 RAB6AP20340 208 aa8.55□□□□□ -1.04
YBX3-207ENST00000539204 C2orf76Q3KRA6 126 aa8.55□□□□□ -1.04
YBX3-207ENST00000539204 HSD17B13Q7Z5P4 300 aaPredicted RBP8.55□□□□□ -1.04
YBX3-207ENST00000539204 CADM3Q8N126 398 aa8.55□□□□□ -1.04
YBX3-207ENST00000539204 LILRB2Q8N423 598 aa8.55□□□□□ -1.04
YBX3-207ENST00000539204 QTRT1Q9BXR0 403 aaKnown RBP8.55□□□□□ -1.04
YBX3-207ENST00000539204 DIABLOQ9NR28 239 aa8.55□□□□□ -1.04
YBX3-207ENST00000539204 RABAC1Q9UI14 185 aa8.55□□□□□ -1.04
YBX3-207ENST00000539204 KCNK7Q9Y2U2 307 aa8.55□□□□□ -1.04
YBX3-207ENST00000539204 OR2W1Q9Y3N9 320 aa8.55□□□□□ -1.04
YBX3-207ENST00000539204 NACAE9PAV3 2078 aa8.55□□□□□ -1.04
YBX3-207ENST00000539204 FLG2Q5D862 2391 aaPredicted RBP8.54□□□□□ -1.04
YBX3-207ENST00000539204 KNCNA6PVL3 124 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 GABARAPH6UMI1 98 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 TRAPPC2P0DI81 140 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 TRAPPC2BP0DI82 140 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 INPP1P49441 399 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 EMP1P54849 157 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 CLDN12P56749 244 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 KRTAP10-2P60368 255 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 ACTL10Q5JWF8 245 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 LYPD1Q8N2G4 141 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 ST8SIA2Q92186 375 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 FRZBQ92765 325 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 RAB3CQ96E17 227 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 GINS3Q9BRX5 216 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 C1QTNF4Q9BXJ3 329 aa8.54□□□□□ -1.04
YBX3-207ENST00000539204 TRAV3A0A0B4J244 114 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 TMEM272A0A1B0GTI8 110 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 TMEM189A5PLL7 270 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 J3QL48 77 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 K7EIM0 57 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 UPK2O00526 184 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 HTN3P15516 51 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 NUTF2P61970 127 aaKnown RBP8.53□□□□□ -1.04
YBX3-207ENST00000539204 SSBP1Q04837 148 aaKnown RBP8.53□□□□□ -1.04
YBX3-207ENST00000539204 WT1-ASQ06250 92 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 Q5VSD8 79 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 THOC7Q6I9Y2 204 aaKnown RBP8.53□□□□□ -1.04
YBX3-207ENST00000539204 FCAMRQ8WWV6 532 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 MARVELD1Q9BSK0 173 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 VSIRQ9H7M9 311 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 TAS2R8Q9NYW2 309 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 RAB22AQ9UL26 194 aa8.53□□□□□ -1.04
YBX3-207ENST00000539204 F11RQ9Y624 299 aaKnown RBP8.53□□□□□ -1.04
YBX3-207ENST00000539204 IGHV3-66A0A0C4DH42 116 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 TEX50A0A1B0GTY4 177 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 NAP1L6A6NFF2 107 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 CENPXA8MT69 81 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 SULT1C2O00338 296 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 SCGNO76038 276 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 APOHP02749 345 aaPredicted RBP8.52□□□□□ -1.05
YBX3-207ENST00000539204 CTXN2P0C2S0 81 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 GNB3P16520 340 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 NFYAP23511 347 aaPredicted RBP8.52□□□□□ -1.05
YBX3-207ENST00000539204 TAS2R20P59543 309 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 AP3S2P59780 193 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 EIF4EBP1Q13541 118 aaPredicted RBP8.52□□□□□ -1.05
YBX3-207ENST00000539204 TMEM69Q5SWH9 247 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 TMEM88Q6PEY1 159 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 Q6ZS49 121 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 TOMM5Q8N4H5 51 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 ENKURQ8TC29 256 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 GRAMD2BQ96HH9 432 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 NEU1Q99519 415 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 NIPSNAP3BQ9BS92 247 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 COPZ2Q9P299 210 aa8.52□□□□□ -1.05
YBX3-207ENST00000539204 IGKV1D-8A0A087WSZ0 117 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 TEX48A0A1B0GUV7 120 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 FAM240BA0A1B0GVZ2 78 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 ANKRD20A5PA0PJZ0 165 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 NQO2P16083 231 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 MFAP4P55083 255 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 TAS2R31P59538 309 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 KLF9Q13886 244 aaPredicted RBP8.51□□□□□ -1.05
YBX3-207ENST00000539204 C15orf53Q8NAA6 179 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 OR52I2Q8NH67 350 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 ZNRF2Q8NHG8 242 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 TXN2Q99757 166 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 TMEM231Q9H6L2 316 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 XCL2Q9UBD3 114 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 DKK2Q9UBU2 259 aa8.51□□□□□ -1.05
YBX3-207ENST00000539204 IGKV1D-13A0A0B4J2D9 117 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 LINC00854A0A1B0GVQ3 168 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 METTL21EPA6NDL7 271 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 SMIM9A6NGZ8 99 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 K7EQG2 157 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 HPRT1P00492 218 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 FGF2P09038 288 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 ZNF688P0C7X2 276 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 IGKV1-13P0DP09 117 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 HLA-DMAP28067 261 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 BTCP35070 178 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 TOMM20LQ6UXN7 152 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms