RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 SPNS3Q6ZMD2 512 aa20.32■□□□□ 0.84
KLHL42-202ENST00000539176 ZNF114Q8NC26 417 aa20.32■□□□□ 0.84
KLHL42-202ENST00000539176 OR4F5Q8NH21 305 aa20.32■□□□□ 0.84
KLHL42-202ENST00000539176 ISOC2Q96AB3 205 aa20.32■□□□□ 0.84
KLHL42-202ENST00000539176 OR4F4Q96R69 305 aa20.32■□□□□ 0.84
KLHL42-202ENST00000539176 CSMD1Q96PZ7 3565 aa20.32■□□□□ 0.84
KLHL42-202ENST00000539176 C11orf94C9JXX5 98 aa20.31■□□□□ 0.84
KLHL42-202ENST00000539176 E7EUB6 86 aa20.31■□□□□ 0.84
KLHL42-202ENST00000539176 CD24P25063 80 aa20.31■□□□□ 0.84
KLHL42-202ENST00000539176 LOXL1Q08397 574 aaPredicted RBP20.31■□□□□ 0.84
KLHL42-202ENST00000539176 C10orf55Q5SWW7 151 aa20.31■□□□□ 0.84
KLHL42-202ENST00000539176 TPSG1Q9NRR2 321 aa20.31■□□□□ 0.84
KLHL42-202ENST00000539176 SIGLEC9Q9Y336 463 aa20.31■□□□□ 0.84
KLHL42-202ENST00000539176 LINC00869P0C866 280 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 ARL14EPLP0DKL9 152 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 CNTFRP26992 372 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 RUSC1-AS1Q66K80 236 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 ABHD5Q8WTS1 349 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 AJUBAQ96IF1 538 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.3■□□□□ 0.84
KLHL42-202ENST00000539176 SAA4P35542 130 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 RPL27AP46776 148 aaKnown RBP20.3■□□□□ 0.84
KLHL42-202ENST00000539176 FBLN7Q53RD9 439 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 PIP4P2Q8N4L2 257 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 LINC01356Q8N9X3 169 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 CFHR4Q92496 578 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 YPEL4Q96NS1 127 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 C7orf69Q9H7B7 122 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 HECTD1Q9ULT8 2610 aa20.3■□□□□ 0.84
KLHL42-202ENST00000539176 SVEP1Q4LDE5 3571 aa20.29■□□□□ 0.84
KLHL42-202ENST00000539176 F6UZH7 168 aa20.29■□□□□ 0.84
KLHL42-202ENST00000539176 COMPP49747 757 aaPredicted RBP20.29■□□□□ 0.84
KLHL42-202ENST00000539176 MINOS1Q5TGZ0 78 aa20.29■□□□□ 0.84
KLHL42-202ENST00000539176 PVRIGQ6DKI7 326 aa20.29■□□□□ 0.84
KLHL42-202ENST00000539176 GATAD1Q8WUU5 269 aa20.29■□□□□ 0.84
KLHL42-202ENST00000539176 MALSU1Q96EH3 234 aa20.29■□□□□ 0.84
KLHL42-202ENST00000539176 MINOS1-NBL1R4GNA1 71 aa20.29■□□□□ 0.84
KLHL42-202ENST00000539176 ARL2-SNX15V9GYD0 113 aa20.29■□□□□ 0.84
KLHL42-202ENST00000539176 UNC79Q9P2D8 2635 aa20.29■□□□□ 0.84
KLHL42-202ENST00000539176 PDZD2O15018 2839 aa20.29■□□□□ 0.84
KLHL42-202ENST00000539176 IGKV1OR2-108A0A075B7D4 117 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 TRAV40A0A0B4J280 105 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 NPFFO15130 113 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 RAB5AP20339 215 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 RAB5BP61020 215 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 TMEM241Q24JQ0 296 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 PRSS57Q6UWY2 283 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 PPP1R27Q86WC6 154 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 WFDC11Q8NEX6 87 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 CTDSP1Q9GZU7 261 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 IGLC7A0M8Q6 106 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 OR10J1P30954 320 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 ETFRF1Q6IPR1 90 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 FAM24BQ8N5W8 94 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 PARLQ9H300 379 aa20.28■□□□□ 0.84
KLHL42-202ENST00000539176 METTL1Q9UBP6 276 aaKnown RBP20.28■□□□□ 0.84
KLHL42-202ENST00000539176 TRAV20A0A0B4J274 112 aa20.27■□□□□ 0.84
KLHL42-202ENST00000539176 CLN5O75503 358 aa20.27■□□□□ 0.84
KLHL42-202ENST00000539176 TSPAN9O75954 239 aa20.27■□□□□ 0.84
KLHL42-202ENST00000539176 VENTXO95231 258 aa20.27■□□□□ 0.84
KLHL42-202ENST00000539176 AVPP01185 164 aa20.27■□□□□ 0.84
KLHL42-202ENST00000539176 FUT9Q9Y231 359 aa20.27■□□□□ 0.84
KLHL42-202ENST00000539176 TBL2Q9Y4P3 447 aaKnown RBP20.27■□□□□ 0.84
KLHL42-202ENST00000539176 C1orf196B1AJZ1 125 aa20.26■□□□□ 0.83
KLHL42-202ENST00000539176 IGHV4-31P0DP07 118 aa20.26■□□□□ 0.83
KLHL42-202ENST00000539176 IGHV4-38-2P0DP08 117 aa20.26■□□□□ 0.83
KLHL42-202ENST00000539176 HABP2Q14520 560 aaPredicted RBP20.26■□□□□ 0.83
KLHL42-202ENST00000539176 TNXAQ16473 311 aa20.26■□□□□ 0.83
KLHL42-202ENST00000539176 BRD3OSQ6XYD6 125 aa20.26■□□□□ 0.83
KLHL42-202ENST00000539176 RPUSD4Q96CM3 377 aaKnown RBP20.26■□□□□ 0.83
KLHL42-202ENST00000539176 RNF2Q99496 336 aa20.26■□□□□ 0.83
KLHL42-202ENST00000539176 SRSF8Q9BRL6 282 aaKnown RBP20.26■□□□□ 0.83
KLHL42-202ENST00000539176 SEPSECSQ9HD40 501 aaKnown RBP20.26■□□□□ 0.83
KLHL42-202ENST00000539176 ITPR2Q14571 2701 aa20.26■□□□□ 0.83
KLHL42-202ENST00000539176 CORTO00230 105 aa20.26■□□□□ 0.83
KLHL42-202ENST00000539176 TGFAP01135 160 aa20.26■□□□□ 0.83
KLHL42-202ENST00000539176 GCHFRP30047 84 aa20.26■□□□□ 0.83
KLHL42-202ENST00000539176 IGHV1-69DA0A0B4J2H0 117 aa20.25■□□□□ 0.83
KLHL42-202ENST00000539176 IGHV1-69P01742 117 aa20.25■□□□□ 0.83
KLHL42-202ENST00000539176 CTRB1P17538 263 aa20.25■□□□□ 0.83
KLHL42-202ENST00000539176 CTRB2Q6GPI1 263 aa20.25■□□□□ 0.83
KLHL42-202ENST00000539176 OOSP1A8MZH6 123 aa20.24■□□□□ 0.83
KLHL42-202ENST00000539176 OR5G3P0C626 314 aa20.24■□□□□ 0.83
KLHL42-202ENST00000539176 TAS2R45P59539 299 aa20.24■□□□□ 0.83
KLHL42-202ENST00000539176 ZNF674Q2M3X9 581 aa20.24■□□□□ 0.83
KLHL42-202ENST00000539176 FAM78BQ5VT40 261 aa20.24■□□□□ 0.83
KLHL42-202ENST00000539176 CST9LP1Q5W188 147 aa20.24■□□□□ 0.83
KLHL42-202ENST00000539176 THAP8Q8NA92 274 aa20.24■□□□□ 0.83
KLHL42-202ENST00000539176 MRPL32Q9BYC8 188 aaKnown RBP20.24■□□□□ 0.83
KLHL42-202ENST00000539176 SOX21Q9Y651 276 aaPredicted RBP20.24■□□□□ 0.83
KLHL42-202ENST00000539176 CELSR1Q9NYQ6 3014 aa20.24■□□□□ 0.83
KLHL42-202ENST00000539176 SELENOTP62341 195 aa20.24■□□□□ 0.83
KLHL42-202ENST00000539176 CCDC144NLQ6NUI1 221 aa20.24■□□□□ 0.83
KLHL42-202ENST00000539176 OR1P1Q8NH06 330 aa20.24■□□□□ 0.83
KLHL42-202ENST00000539176 ACY3Q96HD9 319 aa20.24■□□□□ 0.83
KLHL42-202ENST00000539176 TECRQ9NZ01 308 aaKnown RBP20.24■□□□□ 0.83
KLHL42-202ENST00000539176 CLDN34H7C241 214 aa20.23■□□□□ 0.83
KLHL42-202ENST00000539176 RND2P52198 227 aa20.23■□□□□ 0.83
KLHL42-202ENST00000539176 CIARTQ8N365 385 aaPredicted RBP20.23■□□□□ 0.83
KLHL42-202ENST00000539176 C22orf15Q8WYQ4 148 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms