RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 Q56UQ5 140 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 TMEM128Q5BJH2 165 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 ZNF57Q68EA5 555 aaPredicted RBP6.28□□□□□ -1.4
SPARC-208ENST00000538026 LCN12Q6JVE5 192 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 TOMM20LQ6UXN7 152 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 DEFB125Q8N687 156 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 OR2K2Q8NGT1 345 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 DEDD2Q8WXF8 326 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 OR10C1Q96KK4 312 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 SCGB3A2Q96PL1 93 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 CITED4Q96RK1 184 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 TXN2Q99757 166 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 SLC25A21Q9BQT8 299 aaPredicted RBP6.28□□□□□ -1.4
SPARC-208ENST00000538026 NEURL2Q9BR09 285 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 TM2D3Q9BRN9 247 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 TECRQ9NZ01 308 aaKnown RBP6.28□□□□□ -1.4
SPARC-208ENST00000538026 MRPL27Q9P0M9 148 aaKnown RBP6.28□□□□□ -1.4
SPARC-208ENST00000538026 HSPB7Q9UBY9 170 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 KCNIP3Q9Y2W7 256 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 C15orf62A8K5M9 175 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 CYB5BO43169 146 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 ANXA7P20073 488 aaKnown RBP6.27□□□□□ -1.41
SPARC-208ENST00000538026 FAUP35544 74 aaKnown RBP6.27□□□□□ -1.41
SPARC-208ENST00000538026 SNCAP37840 140 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 HOXA1P49639 335 aaPredicted RBP6.27□□□□□ -1.41
SPARC-208ENST00000538026 CD81P60033 236 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 DCTN2Q13561 401 aaKnown RBP6.27□□□□□ -1.41
SPARC-208ENST00000538026 SMCO1Q147U7 214 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 HAGHQ16775 308 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 C2orf83Q53S99 150 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 FAM90A2PQ658T7 463 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 PRSS54Q6PEW0 395 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 LGI3Q8N145 548 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 OR4X1Q8NH49 305 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 DYNLRB2Q8TF09 96 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 RNF2Q99496 336 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 C20orf24Q9BUV8 137 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 RBKSQ9H477 322 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 SMPXQ9UHP9 88 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 UFC1Q9Y3C8 167 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 BOLA1Q9Y3E2 137 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 U3KQK5 164 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 DNAH17Q9UFH2 4485 aa6.27□□□□□ -1.41
SPARC-208ENST00000538026 EPPK1P58107 5090 aaKnown RBP6.26□□□□□ -1.41
SPARC-208ENST00000538026 IGHV3OR16-13A0A075B7E8 117 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 IGHV3-74A0A0B4J1X5 117 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 IGHV7-4-1A0A0J9YVY3 117 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 C9orf170A2RU37 121 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 CHEK1O14757 476 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 CLN5O75503 358 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 ADAP1O75689 374 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 HTR2BP41595 481 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 IFITM3Q01628 133 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 DHRS2Q13268 280 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 RBMS2Q15434 407 aaKnown RBP6.26□□□□□ -1.41
SPARC-208ENST00000538026 GUCA2BQ16661 112 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 TIGITQ495A1 244 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 TRIQKQ629K1 86 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 CENPSQ8N2Z9 138 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 RNASE11Q8TAA1 199 aaKnown RBP6.26□□□□□ -1.41
SPARC-208ENST00000538026 MARC2Q969Z3 335 aa6.26□□□□□ -1.41
SPARC-208ENST00000538026 HEYLQ9NQ87 328 aaPredicted RBP6.26□□□□□ -1.41
SPARC-208ENST00000538026 DAZ1Q9NQZ3 744 aaKnown RBP6.26□□□□□ -1.41
SPARC-208ENST00000538026 IGKV1D-37A0A075B6S9 117 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 TRAV25A0A0B4J276 109 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 IGHV3-66A0A0C4DH42 116 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 NAP1L6A6NFF2 107 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 CEBPZOSA8MTT3 80 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 OR11H12B2RN74 326 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 TSPAN4O14817 238 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 NUPL2O15504 423 aaKnown RBP6.25□□□□□ -1.41
SPARC-208ENST00000538026 HOXB5P09067 269 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 OR4E1P0C645 316 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 IGLC1P0CG04 106 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 VAMP1P23763 118 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 ODF3L2Q3SX64 289 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 GGNBP1Q5YKI7 109 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 TMEM116Q8NCL8 245 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 DUSP18Q8NEJ0 188 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 SLC24A4Q8NFF2 622 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 OR52B4Q8NGK2 314 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 DTD1Q8TEA8 209 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 ST8SIA2Q92186 375 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 RCHY1Q96PM5 261 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 PDCD10Q9BUL8 212 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 RHPN1-AS1Q9BWJ2 59 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 VSIRQ9H7M9 311 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 RETNQ9HD89 108 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 PALMDQ9NP74 551 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 TBC1D24Q9ULP9 559 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 PUS1Q9Y606 427 aaKnown RBP eCLIP6.25□□□□□ -1.41
SPARC-208ENST00000538026 U3KQE9 123 aa6.25□□□□□ -1.41
SPARC-208ENST00000538026 TRAV14DV4A0A0A6YYC5 116 aa6.24□□□□□ -1.41
SPARC-208ENST00000538026 DUXBA0A1W2PPF3 345 aa6.24□□□□□ -1.41
SPARC-208ENST00000538026 PRSS46E5RG02 174 aa6.24□□□□□ -1.41
SPARC-208ENST00000538026 GNG7O60262 68 aa6.24□□□□□ -1.41
SPARC-208ENST00000538026 YIF1AO95070 293 aa6.24□□□□□ -1.41
SPARC-208ENST00000538026 IAPPP10997 89 aa6.24□□□□□ -1.41
SPARC-208ENST00000538026 SLC25A6P12236 298 aa6.24□□□□□ -1.41
SPARC-208ENST00000538026 ANXA3P12429 323 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms