RNA–Protein interactions for RNA: ENST00000538013.5

RAD9A-205, Transcript of RAD9 checkpoint clamp component A, human

TSL 5

Gene RAD9A, Length 924 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD9A-205	ENST00000538013	DIRAS2	Q96HU8	199 aa		13.86	□□□□□ -0.19
RAD9A-205	ENST00000538013	MIXL1	Q9H2W2	232 aa		13.86	□□□□□ -0.19
RAD9A-205	ENST00000538013	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
RAD9A-205	ENST00000538013	TRAV2	A0A0B4J234	112 aa		13.85	□□□□□ -0.19
RAD9A-205	ENST00000538013	C3orf85	A0A1B0GTC6	90 aa		13.85	□□□□□ -0.19
RAD9A-205	ENST00000538013	ATG12	O94817	140 aa		13.85	□□□□□ -0.19
RAD9A-205	ENST00000538013	RNASE2	P10153	161 aa	Known RBP	13.85	□□□□□ -0.19
RAD9A-205	ENST00000538013	IL18	Q14116	193 aa		13.85	□□□□□ -0.19
RAD9A-205	ENST00000538013	STEAP1B	Q6NZ63	245 aa		13.85	□□□□□ -0.19
RAD9A-205	ENST00000538013	CCDC71L	Q8N9Z2	235 aa		13.85	□□□□□ -0.19
RAD9A-205	ENST00000538013	DYNC2LI1	Q8TCX1	351 aa		13.85	□□□□□ -0.19
RAD9A-205	ENST00000538013	RARRES2	Q99969	163 aa		13.85	□□□□□ -0.19
RAD9A-205	ENST00000538013	MS4A6A	Q9H2W1	248 aa		13.85	□□□□□ -0.19
RAD9A-205	ENST00000538013	COPZ2	Q9P299	210 aa		13.85	□□□□□ -0.19
RAD9A-205	ENST00000538013		A0A1B0GU03	582 aa		13.84	□□□□□ -0.19
RAD9A-205	ENST00000538013	CORT	O00230	105 aa		13.84	□□□□□ -0.19
RAD9A-205	ENST00000538013	DFFB	O76075	338 aa		13.84	□□□□□ -0.19
RAD9A-205	ENST00000538013	IFNA17	P01571	189 aa		13.84	□□□□□ -0.19
RAD9A-205	ENST00000538013	PPP5C	P53041	499 aa		13.84	□□□□□ -0.19
RAD9A-205	ENST00000538013	MEF2D	Q14814	521 aa		13.84	□□□□□ -0.19
RAD9A-205	ENST00000538013	TERB2	Q8NHR7	220 aa		13.84	□□□□□ -0.19
RAD9A-205	ENST00000538013	C11orf68	Q9H3H3	251 aa	Known RBP	13.84	□□□□□ -0.19
RAD9A-205	ENST00000538013	IGHV3-66	A0A0C4DH42	116 aa		13.83	□□□□□ -0.2
RAD9A-205	ENST00000538013	CD74	P04233	296 aa		13.83	□□□□□ -0.2
RAD9A-205	ENST00000538013	UCP1	P25874	307 aa		13.83	□□□□□ -0.2
RAD9A-205	ENST00000538013	ETV6	P41212	452 aa		13.83	□□□□□ -0.2
RAD9A-205	ENST00000538013	SUB1	P53999	127 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
RAD9A-205	ENST00000538013	OR11H2	Q8NH07	326 aa		13.83	□□□□□ -0.2
RAD9A-205	ENST00000538013	PDCD10	Q9BUL8	212 aa		13.83	□□□□□ -0.2
RAD9A-205	ENST00000538013	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.83	□□□□□ -0.2
RAD9A-205	ENST00000538013	MRPL36	Q9P0J6	103 aa	Known RBP	13.83	□□□□□ -0.2
RAD9A-205	ENST00000538013		A0A0G2JRQ6	117 aa		13.82	□□□□□ -0.2
RAD9A-205	ENST00000538013	DISC1	C4P0D8	188 aa		13.82	□□□□□ -0.2
RAD9A-205	ENST00000538013	DNASE2	O00115	360 aa	Predicted RBP	13.82	□□□□□ -0.2
RAD9A-205	ENST00000538013	CA1	P00915	261 aa	Predicted RBP	13.82	□□□□□ -0.2
RAD9A-205	ENST00000538013	DEFB131A	P59861	70 aa		13.82	□□□□□ -0.2
RAD9A-205	ENST00000538013	TRIM16L	Q309B1	348 aa		13.82	□□□□□ -0.2
RAD9A-205	ENST00000538013	BSX	Q3C1V8	233 aa		13.82	□□□□□ -0.2
RAD9A-205	ENST00000538013	SP6	Q3SY56	376 aa		13.82	□□□□□ -0.2
RAD9A-205	ENST00000538013	FAM24B	Q8N5W8	94 aa		13.82	□□□□□ -0.2
RAD9A-205	ENST00000538013	OR4D10	Q8NGI6	311 aa		13.82	□□□□□ -0.2
RAD9A-205	ENST00000538013	SMIM4	Q8WVI0	70 aa		13.82	□□□□□ -0.2
RAD9A-205	ENST00000538013	TMEM231	Q9H6L2	316 aa		13.82	□□□□□ -0.2
RAD9A-205	ENST00000538013	C14orf166	Q9Y224	244 aa	Known RBP	13.82	□□□□□ -0.2
RAD9A-205	ENST00000538013	DNAH6	Q9C0G6	4158 aa		13.81	□□□□□ -0.2
RAD9A-205	ENST00000538013		H3BMQ9	156 aa		13.81	□□□□□ -0.2
RAD9A-205	ENST00000538013	CTDSPL	O15194	276 aa		13.81	□□□□□ -0.2
RAD9A-205	ENST00000538013	CLN5	O75503	358 aa		13.81	□□□□□ -0.2
RAD9A-205	ENST00000538013	HOXA1	P49639	335 aa	Predicted RBP	13.81	□□□□□ -0.2
RAD9A-205	ENST00000538013	AARD	Q4LEZ3	155 aa		13.81	□□□□□ -0.2
RAD9A-205	ENST00000538013	LEMD1	Q68G75	181 aa		13.81	□□□□□ -0.2
RAD9A-205	ENST00000538013	LGALS9C	Q6DKI2	356 aa		13.81	□□□□□ -0.2
RAD9A-205	ENST00000538013	OR13C8	Q8NGS7	320 aa		13.81	□□□□□ -0.2
RAD9A-205	ENST00000538013	OR4X1	Q8NH49	305 aa		13.81	□□□□□ -0.2
RAD9A-205	ENST00000538013	C11orf45	Q8TAV5	145 aa		13.81	□□□□□ -0.2
RAD9A-205	ENST00000538013	MFF	Q9GZY8	342 aa		13.81	□□□□□ -0.2
RAD9A-205	ENST00000538013	RSL24D1	Q9UHA3	163 aa	Known RBP	13.81	□□□□□ -0.2
RAD9A-205	ENST00000538013	CCDC160	A6NGH7	325 aa		13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	B3GALNT1	O75752	331 aa		13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	AKAIN1	P0CW23	69 aa		13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	NPPC	P23582	126 aa		13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	CRYBB3	P26998	211 aa		13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	OPRK1	P41145	380 aa		13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	NANOS2	P60321	138 aa	Known RBP	13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	RPL11	P62913	178 aa	Known RBP	13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	TMEM187	Q14656	261 aa		13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013		Q6ZRM9	215 aa		13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	RPP25L	Q8N5L8	163 aa	Known RBP	13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	MCFD2	Q8NI22	146 aa		13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	RNASE11	Q8TAA1	199 aa	Known RBP	13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	MARCH1	Q8TCQ1	289 aa		13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	RRNAD1	Q96FB5	475 aa	Known RBP	13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013	ENY2	Q9NPA8	101 aa		13.8	□□□□□ -0.2
RAD9A-205	ENST00000538013		A0A1W2PS18	150 aa		13.79	□□□□□ -0.2
RAD9A-205	ENST00000538013	MLANA	Q16655	118 aa		13.79	□□□□□ -0.2
RAD9A-205	ENST00000538013	METTL26	Q96S19	204 aa		13.79	□□□□□ -0.2
RAD9A-205	ENST00000538013	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	FABP12	A6NFH5	140 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013		K7EQG2	157 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	CDS2	O95674	445 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	IGKV1-17	P01599	117 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	SPCS3	P61009	180 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	RBMS2	Q15434	407 aa	Known RBP	13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	SURF2	Q15527	256 aa	Predicted RBP	13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	FAAP20	Q6NZ36	180 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	FAM219A	Q8IW50	185 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	STH	Q8IWL8	128 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	OR52E5	Q8NH55	327 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	GRAMD2B	Q96HH9	432 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	PRRT1	Q99946	306 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	SLIRP	Q9GZT3	109 aa	Known RBP	13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	TMEM222	Q9H0R3	208 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	RABAC1	Q9UI14	185 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	AGRN	O00468	2067 aa		13.78	□□□□□ -0.2
RAD9A-205	ENST00000538013	SCGB2A1	O75556	95 aa		13.77	□□□□□ -0.21
RAD9A-205	ENST00000538013	DEDD	O75618	318 aa		13.77	□□□□□ -0.21
RAD9A-205	ENST00000538013	P2RY1	P47900	373 aa		13.77	□□□□□ -0.21
RAD9A-205	ENST00000538013	TRPT1	Q86TN4	253 aa	Known RBP	13.77	□□□□□ -0.21
RAD9A-205	ENST00000538013	LHFPL5	Q8TAF8	219 aa		13.77	□□□□□ -0.21
RAD9A-205	ENST00000538013	GLYATL2	Q8WU03	294 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms