RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 HOXA4Q00056 320 aaPredicted RBP8.77□□□□□ -1.01
RTN3-208ENST00000537981 ETDBQ3ZM63 59 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 ZNF441Q8N8Z8 693 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 DDB2Q92466 427 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 SPTSSAQ969W0 71 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 SGK494Q96LW2 274 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 SPATA25Q9BR10 227 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 TMEM191AQ9H0A3 160 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 HEYLQ9NQ87 328 aaPredicted RBP8.77□□□□□ -1.01
RTN3-208ENST00000537981 OSTCQ9NRP0 149 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 F11RQ9Y624 299 aaKnown RBP8.77□□□□□ -1.01
RTN3-208ENST00000537981 IGHV5-51A0A0C4DH38 117 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 CSN3P07498 182 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 P0C879 139 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 HHEXQ03014 270 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 H1FXQ92522 213 aaKnown RBP8.77□□□□□ -1.01
RTN3-208ENST00000537981 SNRNP40Q96DI7 357 aaKnown RBP8.77□□□□□ -1.01
RTN3-208ENST00000537981 MRAP2Q96G30 205 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 FAM110AQ9BQ89 295 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 C20orf78Q9BR46 151 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 GCM1Q9NP62 436 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 INSIG2Q9Y5U4 225 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 MPC1Q9Y5U8 109 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 TNCP24821 2201 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 ARFGEF3Q5TH69 2177 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 B4GALT1P15291 398 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 ACP1P24666 158 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 ZNF137PP52743 207 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 TMEM249Q2WGJ8 235 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 ALKBH6Q3KRA9 238 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 TCTEX1D4Q5JR98 221 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 HES3Q5TGS1 186 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 ZNF503Q96F45 646 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 RAX2Q96IS3 184 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 IGF2BP2-AS1Q96M15 143 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 OXGR1Q96P68 337 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 C1RLQ9NZP8 487 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 IGHV3-64DA0A0J9YX35 117 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 A0A1B0GW15 77 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 PPIFP30405 207 aaKnown RBP8.76□□□□□ -1.01
RTN3-208ENST00000537981 PSG5Q15238 335 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 PDLIM3Q53GG5 364 aaPredicted RBP8.76□□□□□ -1.01
RTN3-208ENST00000537981 CDIP1Q9H305 208 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 LIN7CQ9NUP9 197 aaKnown RBP8.76□□□□□ -1.01
RTN3-208ENST00000537981 KLRF1Q9NZS2 232 aa8.76□□□□□ -1.01
RTN3-208ENST00000537981 AGRNO00468 2067 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 A0A1W2PRX2 142 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 TMEM189A5PLL7 270 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 HIGD1CA8MV81 97 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.75□□□□□ -1.01
RTN3-208ENST00000537981 ZNF32P17041 273 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 FHL3Q13643 280 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 TIGITQ495A1 244 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 SAMD5Q5TGI4 173 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 PCP2Q8IVA1 136 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 SLC22A18ASQ8N1D0 253 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 TTTY13Q9BZ97 58 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 LINC00470Q9BZP3 86 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 PKIBQ9C010 78 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 CHRNA10Q9GZZ6 450 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 MBNL3Q9NUK0 354 aaKnown RBP8.75□□□□□ -1.01
RTN3-208ENST00000537981 PTPRBP23467 1997 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 FAM90A26D6RGX4 464 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 DHHO43323 396 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 FGF12P61328 243 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 AMTNQ6UX39 209 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 VKORC1L1Q8N0U8 176 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 ABHD12Q8N2K0 398 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 SMRP1Q8NCR6 262 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 OR5A1Q8NGJ0 315 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 OR1L3Q8NH93 324 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 RAB1BQ9H0U4 201 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 BOKQ9UMX3 212 aaPredicted RBP8.75□□□□□ -1.01
RTN3-208ENST00000537981 ZNF257Q9Y2Q1 563 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 LY96Q9Y6Y9 160 aa8.75□□□□□ -1.01
RTN3-208ENST00000537981 TRAV25A0A0B4J276 109 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 A6NDN8 102 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 FAM90A7PA6NKC0 464 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 FAM90A22PA8MWA6 464 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 FAM90A12PA8MX19 464 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 FAM90A23PA8MXZ1 464 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 CHEK1O14757 476 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 NKX2-8O15522 239 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 MT-ATP8P03928 68 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 REG1BP48304 166 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 FXYD7P58549 80 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 WFDC3Q8IUB2 231 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 BEX4Q9NWD9 120 aaPredicted RBP8.74□□□□□ -1.01
RTN3-208ENST00000537981 C16orf97H3BN30 126 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 KLF7O75840 302 aaPredicted RBP8.74□□□□□ -1.01
RTN3-208ENST00000537981 OR9G9P0C7N8 305 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 FAM106CPP0CH98 169 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 FABP2P12104 132 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 OPRK1P41145 380 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 FXYD2P54710 66 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 ANXA2RQ3ZCQ2 193 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 FAM106AQ4KMX7 169 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 DHRS13Q6UX07 377 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 MOB3BQ86TA1 216 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms