RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 HIST1H2BMQ99879 126 aa10.92□□□□□ -0.66
SMG6-203ENST00000536871 A0A1W2PPI3 338 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 IGLC7A0M8Q6 106 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 A6NNC1 897 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 C22orf46C9J442 243 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 CRYGCP07315 174 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 COX7A1P24310 79 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 GNB1P62873 340 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 TNXAQ16473 311 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 STXBP6Q8NFX7 210 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 ITLN2Q8WWU7 325 aaPredicted RBP10.91□□□□□ -0.66
SMG6-203ENST00000536871 DNAJC4Q9NNZ3 241 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 PITPNC1Q9UKF7 332 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 CEP295Q9C0D2 2601 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 IGKV1OR2-108A0A075B7D4 117 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 A0A1W2PRE2 83 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 C9JCJ5 164 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 M0QZK8 103 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 GGCTO75223 188 aaKnown RBP10.91□□□□□ -0.66
SMG6-203ENST00000536871 GCGP01275 180 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 ATP5G3P48201 142 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 EFNA4P52798 201 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 UBE2G2P60604 165 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 MINOS1Q5TGZ0 78 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 ACY3Q96HD9 319 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 TRGV9Q99603 122 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 PYGO2Q9BRQ0 406 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 MINOS1-NBL1R4GNA1 71 aa10.91□□□□□ -0.66
SMG6-203ENST00000536871 TET2Q6N021 2002 aaPredicted RBP10.9□□□□□ -0.66
SMG6-203ENST00000536871 NDUFB4O95168 129 aa10.9□□□□□ -0.66
SMG6-203ENST00000536871 DEFA4P12838 97 aa10.9□□□□□ -0.66
SMG6-203ENST00000536871 MRGPRG-AS1Q2M3A8 158 aa10.9□□□□□ -0.66
SMG6-203ENST00000536871 CDPF1Q6NVV7 123 aa10.9□□□□□ -0.66
SMG6-203ENST00000536871 C16orf82Q7Z2V1 217 aa10.9□□□□□ -0.66
SMG6-203ENST00000536871 LINC01551Q86U37 167 aa10.9□□□□□ -0.66
SMG6-203ENST00000536871 PACRGQ96M98 296 aaPredicted RBP10.9□□□□□ -0.66
SMG6-203ENST00000536871 SLC25A33Q9BSK2 321 aa10.9□□□□□ -0.66
SMG6-203ENST00000536871 URGCP-MRPS24S4R325 110 aa10.9□□□□□ -0.66
SMG6-203ENST00000536871 PCNX1Q96RV3 2341 aa10.9□□□□□ -0.66
SMG6-203ENST00000536871 DSPP15924 2871 aaKnown RBP10.9□□□□□ -0.66
SMG6-203ENST00000536871 BOD1L1Q8NFC6 3051 aa10.9□□□□□ -0.66
SMG6-203ENST00000536871 IGHV3-72A0A0B4J1Y9 119 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 ODF3BA8MYP8 253 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 E7EUB6 86 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 COX7A2P2O60397 106 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 CXCL1P09341 107 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 GALR1P47211 349 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 LCN2P80188 198 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 USF2Q15853 346 aaPredicted RBP10.89□□□□□ -0.67
SMG6-203ENST00000536871 TMEM116Q8NCL8 245 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 SRD5A3Q9H8P0 318 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 F11RQ9Y624 299 aaKnown RBP10.89□□□□□ -0.67
SMG6-203ENST00000536871 PIEZO2Q9H5I5 2752 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 PFN1P07737 140 aaKnown RBP10.89□□□□□ -0.67
SMG6-203ENST00000536871 NPPCP23582 126 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 PLGLAQ15195 96 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 C10orf55Q5SWW7 151 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 ZNF343Q6P1L6 599 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 MIR17HGQ75NE6 70 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 NPBQ8NG41 125 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 OR51G1Q8NGK1 321 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 NPIPB3Q92617 1050 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 GPR61Q9BZJ8 451 aa10.89□□□□□ -0.67
SMG6-203ENST00000536871 TGIF2-C20orf24A0A0A6YYL0 155 aa10.88□□□□□ -0.67
SMG6-203ENST00000536871 PSMB11A5LHX3 300 aa10.88□□□□□ -0.67
SMG6-203ENST00000536871 OR7C2O60412 319 aa10.88□□□□□ -0.67
SMG6-203ENST00000536871 MOSP00540 346 aa10.88□□□□□ -0.67
SMG6-203ENST00000536871 ARF6P62330 175 aa10.88□□□□□ -0.67
SMG6-203ENST00000536871 COA6Q5JTJ3 125 aaKnown RBP10.88□□□□□ -0.67
SMG6-203ENST00000536871 C10orf113Q5VZT2 155 aa10.88□□□□□ -0.67
SMG6-203ENST00000536871 OR2T6Q8NHC8 308 aa10.88□□□□□ -0.67
SMG6-203ENST00000536871 RITA1Q96K30 269 aa10.88□□□□□ -0.67
SMG6-203ENST00000536871 FNDC4Q9H6D8 234 aaPredicted RBP10.88□□□□□ -0.67
SMG6-203ENST00000536871 YTHDF2Q9Y5A9 579 aaKnown RBP10.88□□□□□ -0.67
SMG6-203ENST00000536871 ANKHD1Q8IWZ3 2542 aaKnown RBP10.87□□□□□ -0.67
SMG6-203ENST00000536871 TRAV9-1A0A075B6T8 112 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 MDFIC2A0A1B0GVS7 189 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 PPP5D1E7EU14 171 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 NBR2O15453 112 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 NDUFA3O95167 84 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 FAM3BP58499 235 aaPredicted RBP10.87□□□□□ -0.67
SMG6-203ENST00000536871 SPATA31B1PQ5VZV4 182 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 TMEM183AQ8IXX5 376 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 OR2T10Q8NGZ9 312 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 SRSF12Q8WXF0 261 aaKnown RBP10.87□□□□□ -0.67
SMG6-203ENST00000536871 TPSG1Q9NRR2 321 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 TNFRSF19Q9NS68 423 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 BSNQ9UPA5 3926 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 TIMM23O14925 209 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 PERPQ96FX8 193 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 HIST1H2BLQ99880 126 aa10.87□□□□□ -0.67
SMG6-203ENST00000536871 TBL2Q9Y4P3 447 aaKnown RBP10.87□□□□□ -0.67
SMG6-203ENST00000536871 SPTA1P02549 2419 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 SCO2A0A1W2PP80 73 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 TEX22C9J3V5 150 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 M0R143 59 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 TYMSP04818 313 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 FABP4P15090 132 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 PCP4P48539 62 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 PLP1P60201 277 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms