RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 BUB1B-PAK6H3BSN5 160 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 CNTFRP26992 372 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 CNN1P51911 297 aaKnown RBP10.76□□□□□ -0.69
VPS33B-202ENST00000535906 PRRX1P54821 245 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 VMA21Q3ZAQ7 101 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 LURAP1LQ8IV03 231 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 OR10G8Q8NGN5 311 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 SLC35E1Q96K37 410 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 TRAPPC1Q9Y5R8 145 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 LY96Q9Y6Y9 160 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 ARHGAP32A7KAX9 2087 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 C9JCJ5 164 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 LGALS7P47929 136 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 CACNG8Q8WXS5 425 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 CLEC7AQ9BXN2 247 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 RAB1BQ9H0U4 201 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 FNDC4Q9H6D8 234 aaPredicted RBP10.76□□□□□ -0.69
VPS33B-202ENST00000535906 HIVEP3Q5T1R4 2406 aa10.76□□□□□ -0.69
VPS33B-202ENST00000535906 A0A1W2PPI3 338 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 GATCO43716 136 aaKnown RBP10.75□□□□□ -0.69
VPS33B-202ENST00000535906 COX7A1P24310 79 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 SSBP2P81877 361 aaPredicted RBP10.75□□□□□ -0.69
VPS33B-202ENST00000535906 PRSS8Q16651 343 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 OR8B3Q8NGG8 313 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 OR8B2Q96RD0 313 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 TMEM167BQ9NRX6 74 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 CBLN4Q9NTU7 201 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 INSIG2Q9Y5U4 225 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 IGHV1-3A0A0C4DH29 117 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 K7EN84 100 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 IGHV3-48P01763 117 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 REG1AP05451 166 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 GZMBP10144 247 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 HNF1AP20823 631 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 GPX4P36969 197 aaPredicted RBP10.75□□□□□ -0.69
VPS33B-202ENST00000535906 PKIAP61925 76 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 C11orf71Q6IPW1 123 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 PNKDQ8N490 385 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 C8orf46Q8TAG6 207 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 C19orf24Q9BVV8 132 aa10.75□□□□□ -0.69
VPS33B-202ENST00000535906 C22orf46C9J442 243 aa10.74□□□□□ -0.69
VPS33B-202ENST00000535906 PSG5Q15238 335 aa10.74□□□□□ -0.69
VPS33B-202ENST00000535906 BEND2Q8NDZ0 799 aa10.74□□□□□ -0.69
VPS33B-202ENST00000535906 TECRQ9NZ01 308 aaKnown RBP10.74□□□□□ -0.69
VPS33B-202ENST00000535906 TRAV9-1A0A075B6T8 112 aa10.74□□□□□ -0.69
VPS33B-202ENST00000535906 RBP4P02753 201 aa10.74□□□□□ -0.69
VPS33B-202ENST00000535906 TMEM18Q96B42 140 aa10.74□□□□□ -0.69
VPS33B-202ENST00000535906 ZNF503Q96F45 646 aa10.74□□□□□ -0.69
VPS33B-202ENST00000535906 ONECUT1Q9UBC0 465 aa10.74□□□□□ -0.69
VPS33B-202ENST00000535906 ASH1LQ9NR48 2969 aaKnown RBP10.73□□□□□ -0.69
VPS33B-202ENST00000535906 TSTD3H0UI37 97 aa10.73□□□□□ -0.69
VPS33B-202ENST00000535906 GCGP01275 180 aa10.73□□□□□ -0.69
VPS33B-202ENST00000535906 CRYGBP07316 175 aa10.73□□□□□ -0.69
VPS33B-202ENST00000535906 OR5G3P0C626 314 aa10.73□□□□□ -0.69
VPS33B-202ENST00000535906 YPEL3P61236 119 aaPredicted RBP10.73□□□□□ -0.69
VPS33B-202ENST00000535906 DEFA6Q01524 100 aa10.73□□□□□ -0.69
VPS33B-202ENST00000535906 PQLC2Q6ZP29 291 aa10.73□□□□□ -0.69
VPS33B-202ENST00000535906 TEX45Q8NA69 505 aa10.73□□□□□ -0.69
VPS33B-202ENST00000535906 LY6G5BQ8NDX9 201 aa10.73□□□□□ -0.69
VPS33B-202ENST00000535906 EAF1Q96JC9 268 aaPredicted RBP10.73□□□□□ -0.69
VPS33B-202ENST00000535906 IL36BQ9NZH7 164 aa10.73□□□□□ -0.69
VPS33B-202ENST00000535906 MRPL36Q9P0J6 103 aaKnown RBP10.73□□□□□ -0.69
VPS33B-202ENST00000535906 IGLC7A0M8Q6 106 aa10.73□□□□□ -0.69
VPS33B-202ENST00000535906 SUB1P53999 127 aaKnown RBP eCLIP10.73□□□□□ -0.691e-6■■■■■ 30.8
VPS33B-202ENST00000535906 LDLRAD2Q5SZI1 272 aa10.73□□□□□ -0.69
VPS33B-202ENST00000535906 NPIPB3Q92617 1050 aa10.73□□□□□ -0.69
VPS33B-202ENST00000535906 SIGLEC9Q9Y336 463 aa10.73□□□□□ -0.69
VPS33B-202ENST00000535906 A0A1W2PPR1 153 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 PSMB11A5LHX3 300 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 LIPFP07098 398 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 APELAP0DMC3 54 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 TAS2R45P59539 299 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 TNXAQ16473 311 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 RUSC1-AS1Q66K80 236 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 HCP5Q6MZN7 132 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 GBGT1Q8N5D6 347 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 RPEQ96AT9 228 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 HELTA6NFD8 242 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 LY6LH3BQJ8 138 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 OR7C2O60412 319 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 ZNF90Q03938 601 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 MORN5Q5VZ52 161 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 C19orf35Q6ZS72 473 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 MMD2Q8IY49 270 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 PRORYQ9H606 182 aa10.72□□□□□ -0.69
VPS33B-202ENST00000535906 IGKV1D-37A0A075B6S9 117 aa10.71□□□□□ -0.69
VPS33B-202ENST00000535906 CRYBB3P26998 211 aa10.71□□□□□ -0.69
VPS33B-202ENST00000535906 MFAP2P55001 183 aa10.71□□□□□ -0.69
VPS33B-202ENST00000535906 ARF6P62330 175 aa10.71□□□□□ -0.69
VPS33B-202ENST00000535906 TIMD4Q96H15 378 aa10.71□□□□□ -0.69
VPS33B-202ENST00000535906 SLC25A33Q9BSK2 321 aa10.71□□□□□ -0.69
VPS33B-202ENST00000535906 CSMD1Q96PZ7 3565 aa10.71□□□□□ -0.7
VPS33B-202ENST00000535906 SLC17A3O00476 420 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 OR10J4P0C629 311 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 PAX1P15863 534 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 DDTP30046 118 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 RPL27AP46776 148 aaKnown RBP10.7□□□□□ -0.7
VPS33B-202ENST00000535906 GNG4P50150 75 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 PPP1R27Q86WC6 154 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 MRPL32Q9BYC8 188 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms