RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 MISP3Q96FF7 219 aa16.61■□□□□ 0.25
PDXDC1-205ENST00000535621 ACY3Q96HD9 319 aa16.61■□□□□ 0.25
PDXDC1-205ENST00000535621 ACTR3CQ9C0K3 210 aaPredicted RBP16.61■□□□□ 0.25
PDXDC1-205ENST00000535621 SLC45A2Q9UMX9 530 aa16.61■□□□□ 0.25
PDXDC1-205ENST00000535621 CYB5BO43169 146 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 CTRB1P17538 263 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 NDPQ00604 133 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 PEA15Q15121 130 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 CTRB2Q6GPI1 263 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 FAM122CQ6P4D5 195 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 ARPC1AQ92747 370 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 RARRES2Q99969 163 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 RBFOX3A6NFN3 312 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 SEC14L6B5MCN3 397 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 CORTO00230 105 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 IGHV3-48P01763 117 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 CRYGCP07315 174 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 CCDC28AQ8IWP9 274 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 RAB24Q969Q5 203 aa16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 MRPL36Q9P0J6 103 aaKnown RBP16.6■□□□□ 0.25
PDXDC1-205ENST00000535621 ETFRF1Q6IPR1 90 aa16.59■□□□□ 0.25
PDXDC1-205ENST00000535621 PIFOQ8TCI5 191 aa16.59■□□□□ 0.25
PDXDC1-205ENST00000535621 WNT10AQ9GZT5 417 aa16.59■□□□□ 0.25
PDXDC1-205ENST00000535621 IGHV7-81A0A0B4J1V7 117 aa16.58■□□□□ 0.25
PDXDC1-205ENST00000535621 HMGB3O15347 200 aaKnown RBP16.58■□□□□ 0.25
PDXDC1-205ENST00000535621 HLA-DRB1P01911 266 aa16.58■□□□□ 0.25
PDXDC1-205ENST00000535621 APOC3P02656 99 aa16.58■□□□□ 0.25
PDXDC1-205ENST00000535621 SFTA3P0C7M3 94 aa16.58■□□□□ 0.25
PDXDC1-205ENST00000535621 LINC00869P0C866 280 aa16.58■□□□□ 0.25
PDXDC1-205ENST00000535621 OR10J1P30954 320 aa16.58■□□□□ 0.25
PDXDC1-205ENST00000535621 CDC34P49427 236 aaPredicted RBP16.58■□□□□ 0.25
PDXDC1-205ENST00000535621 C10orf91Q5T1B1 145 aa16.58■□□□□ 0.25
PDXDC1-205ENST00000535621 NPIPB3Q92617 1050 aa16.58■□□□□ 0.25
PDXDC1-205ENST00000535621 ASPHD1Q5U4P2 390 aa16.58■□□□□ 0.24
PDXDC1-205ENST00000535621 SLC25A33Q9BSK2 321 aa16.58■□□□□ 0.24
PDXDC1-205ENST00000535621 FLNBO75369 2602 aaKnown RBP16.57■□□□□ 0.24
PDXDC1-205ENST00000535621 J3QLI3 93 aa16.57■□□□□ 0.24
PDXDC1-205ENST00000535621 HAGHQ16775 308 aa16.57■□□□□ 0.24
PDXDC1-205ENST00000535621 RASL11BQ9BPW5 248 aa16.57■□□□□ 0.24
PDXDC1-205ENST00000535621 SEC11CQ9BY50 192 aa16.57■□□□□ 0.24
PDXDC1-205ENST00000535621 SMDT1Q9H4I9 107 aa16.57■□□□□ 0.24
PDXDC1-205ENST00000535621 F8W036 122 aa16.57■□□□□ 0.24
PDXDC1-205ENST00000535621 MT-CO2P00403 227 aa16.57■□□□□ 0.24
PDXDC1-205ENST00000535621 RND2P52198 227 aa16.57■□□□□ 0.24
PDXDC1-205ENST00000535621 THAP8Q8NA92 274 aa16.57■□□□□ 0.24
PDXDC1-205ENST00000535621 GNG13Q9P2W3 67 aa16.57■□□□□ 0.24
PDXDC1-205ENST00000535621 IGKV1D-37A0A075B6S9 117 aa16.56■□□□□ 0.24
PDXDC1-205ENST00000535621 EGR2P11161 476 aaPredicted RBP16.56■□□□□ 0.24
PDXDC1-205ENST00000535621 GATA2P23769 480 aaPredicted RBP16.56■□□□□ 0.24
PDXDC1-205ENST00000535621 PPT1P50897 306 aa16.56■□□□□ 0.24
PDXDC1-205ENST00000535621 TMEM116Q8NCL8 245 aa16.56■□□□□ 0.24
PDXDC1-205ENST00000535621 C22orf15Q8WYQ4 148 aa16.56■□□□□ 0.24
PDXDC1-205ENST00000535621 HSPB9Q9BQS6 159 aa16.56■□□□□ 0.24
PDXDC1-205ENST00000535621 CARHSP1Q9Y2V2 147 aaKnown RBP16.56■□□□□ 0.24
PDXDC1-205ENST00000535621 SONP18583 2426 aaKnown RBP16.56■□□□□ 0.24
PDXDC1-205ENST00000535621 NPIPB5A8MRT5 1133 aa16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 PMS2P11Q13670 270 aa16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 ZNF506Q5JVG8 444 aa16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 SSX3Q99909 188 aa16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 A0A1W2PPV4 95 aa16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 I3L2K1 104 aa16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 FBP1P09467 338 aa16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 ICAM4Q14773 271 aa16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 CYB5R2Q6BCY4 276 aa16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 CYP2G1PQ6ZSU1 146 aa16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 TTC9CQ8N5M4 171 aa16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 C5orf56Q8N8D9 126 aa16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 OR1L6Q8NGR2 347 aa16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 RBM14Q96PK6 669 aaKnown RBP16.55■□□□□ 0.24
PDXDC1-205ENST00000535621 MXRA5Q9NR99 2828 aa16.54■□□□□ 0.24
PDXDC1-205ENST00000535621 IGHV3-21A0A0B4J1V1 117 aa16.54■□□□□ 0.24
PDXDC1-205ENST00000535621 MDFIC2A0A1B0GVS7 189 aa16.54■□□□□ 0.24
PDXDC1-205ENST00000535621 ZFP92A6NM28 416 aa16.54■□□□□ 0.24
PDXDC1-205ENST00000535621 TMEM219Q86XT9 240 aa16.54■□□□□ 0.24
PDXDC1-205ENST00000535621 BCL6BQ8N143 479 aaPredicted RBP16.54■□□□□ 0.24
PDXDC1-205ENST00000535621 SLC35B3Q9H1N7 401 aa16.54■□□□□ 0.24
PDXDC1-205ENST00000535621 TMPRSS5Q9H3S3 457 aa16.54■□□□□ 0.24
PDXDC1-205ENST00000535621 SEPSECSQ9HD40 501 aaKnown RBP16.54■□□□□ 0.24
PDXDC1-205ENST00000535621 OTOGQ6ZRI0 2925 aa16.54■□□□□ 0.24
PDXDC1-205ENST00000535621 LOC102723971A0A1B0GUV8 181 aa16.53■□□□□ 0.24
PDXDC1-205ENST00000535621 TCRBV4S1A1TA0A5B7 111 aa16.53■□□□□ 0.24
PDXDC1-205ENST00000535621 SCO1O75880 301 aa16.53■□□□□ 0.24
PDXDC1-205ENST00000535621 BCL2P10415 239 aa16.53■□□□□ 0.24
PDXDC1-205ENST00000535621 DEFA5Q01523 94 aa16.53■□□□□ 0.24
PDXDC1-205ENST00000535621 KHDC3LQ587J8 217 aa16.53■□□□□ 0.24
PDXDC1-205ENST00000535621 ZNF90Q03938 601 aa16.53■□□□□ 0.24
PDXDC1-205ENST00000535621 GUCA2BQ16661 112 aa16.52■□□□□ 0.24
PDXDC1-205ENST00000535621 RXFP4Q8TDU9 374 aa16.52■□□□□ 0.24
PDXDC1-205ENST00000535621 MOB4Q9Y3A3 225 aa16.52■□□□□ 0.24
PDXDC1-205ENST00000535621 BAHCC1Q9P281 2608 aa16.52■□□□□ 0.23
PDXDC1-205ENST00000535621 K7EIM0 57 aa16.52■□□□□ 0.23
PDXDC1-205ENST00000535621 HSPB1P04792 205 aaKnown RBP16.52■□□□□ 0.23
PDXDC1-205ENST00000535621 STAG3L2P0CL84 134 aa16.52■□□□□ 0.23
PDXDC1-205ENST00000535621 STAG3L3P0CL85 134 aa16.52■□□□□ 0.23
PDXDC1-205ENST00000535621 RHOBP62745 196 aa16.52■□□□□ 0.23
PDXDC1-205ENST00000535621 KRTAP1-1Q07627 177 aa16.52■□□□□ 0.23
PDXDC1-205ENST00000535621 SGMS2Q8NHU3 365 aa16.52■□□□□ 0.23
PDXDC1-205ENST00000535621 TSPAN9O75954 239 aa16.51■□□□□ 0.23
PDXDC1-205ENST00000535621 AMY1AP04745 511 aa16.51■□□□□ 0.23
PDXDC1-205ENST00000535621 IL17RELQ6ZVW7 336 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms