RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 RPL38P63173 70 aaKnown RBP4.22□□□□□ -1.73
SNHG1-201ENST00000535076 DPTQ07507 201 aa4.22□□□□□ -1.73
SNHG1-201ENST00000535076 MFSD12Q6NUT3 480 aa4.22□□□□□ -1.73
SNHG1-201ENST00000535076 NOXRED1Q6NXP6 359 aa4.22□□□□□ -1.73
SNHG1-201ENST00000535076 HSD11B1LQ7Z5J1 315 aa4.22□□□□□ -1.73
SNHG1-201ENST00000535076 HAPLN4Q86UW8 402 aa4.22□□□□□ -1.73
SNHG1-201ENST00000535076 RPS19BP1Q86WX3 136 aaKnown RBP4.22□□□□□ -1.73
SNHG1-201ENST00000535076 C11orf53Q8IXP5 236 aa4.22□□□□□ -1.73
SNHG1-201ENST00000535076 SSC4DQ8WTU2 575 aa4.22□□□□□ -1.73
SNHG1-201ENST00000535076 H1FXQ92522 213 aaKnown RBP4.22□□□□□ -1.73
SNHG1-201ENST00000535076 CHCHD1Q96BP2 118 aaKnown RBP4.22□□□□□ -1.73
SNHG1-201ENST00000535076 ZNF689Q96CS4 500 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-201ENST00000535076 TIMD4Q96H15 378 aa4.22□□□□□ -1.73
SNHG1-201ENST00000535076 APOOQ9BUR5 198 aa4.22□□□□□ -1.73
SNHG1-201ENST00000535076 TMEM59Q9BXS4 323 aa4.22□□□□□ -1.73
SNHG1-201ENST00000535076 IL36BQ9NZH7 164 aa4.22□□□□□ -1.73
SNHG1-201ENST00000535076 COL2A1P02458 1487 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-201ENST00000535076 CPAMD8Q8IZJ3 1885 aa4.22□□□□□ -1.73
SNHG1-201ENST00000535076 SHROOM3Q8TF72 1996 aa4.22□□□□□ -1.73
SNHG1-201ENST00000535076 PIGBOS1A0A0B4J2F0 54 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 IGHV1-24A0A0C4DH33 117 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 TRBV5-5A0A0J9YX44 114 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 SDCBPO00560 298 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-201ENST00000535076 LMX1BO60663 402 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 FSHBP01225 129 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 RBP4P02753 201 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 HLA-DRB4P13762 266 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 POLR2LP62875 67 aaKnown RBP4.21□□□□□ -1.74
SNHG1-201ENST00000535076 SP4Q02446 784 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 EIF3IQ13347 325 aaKnown RBP4.21□□□□□ -1.74
SNHG1-201ENST00000535076 UNC119Q13432 240 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 FHL3Q13643 280 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 LY6KQ17RY6 165 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 DMRTC1Q5HYR2 192 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 MRPL2Q5T653 305 aaKnown RBP4.21□□□□□ -1.74
SNHG1-201ENST00000535076 LINC01545Q5VT33 79 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 FAM166AQ6J272 317 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 EBLN2Q6P2I7 272 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 TMEM207Q6UWW9 146 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 PQLC2Q6ZP29 291 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 Q71RC1 249 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-201ENST00000535076 PRSS41Q7RTY9 318 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 ANKRD29Q8N6D5 301 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 C15orf53Q8NAA6 179 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 MORN4Q8NDC4 146 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 OR10AC1Q8NH08 325 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 ZPLD1Q8TCW7 415 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 LMX1AQ8TE12 382 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 TMEM255BQ8WV15 326 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 OVCA2Q8WZ82 227 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 FGF13Q92913 245 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 MRPL20Q9BYC9 149 aaKnown RBP4.21□□□□□ -1.74
SNHG1-201ENST00000535076 OR10A2Q9H208 303 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 GNG13Q9P2W3 67 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 PEMTQ9UBM1 199 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 PYGO1Q9Y3Y4 419 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 ARL2-SNX15V9GYD0 113 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 HLA-DRB4X5D2U9 266 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 SCN5AQ14524 2016 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 DOCK6Q96HP0 2047 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 ANKRD36A6QL64 1941 aa4.21□□□□□ -1.74
SNHG1-201ENST00000535076 PLXNA3P51805 1871 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 TRBV5-7A0A0A0MS05 114 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 CCL15-CCL14A0A0B4J2E2 113 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 FAM236DA0A1B0GTK5 79 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 IGLL5B9A064 214 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 LINC01619G3V211 115 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 PIN1P1O15428 100 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 SSSCA1O60232 199 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 NDUFS7O75251 213 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 ZFAND5O76080 213 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 TRACP01848 142 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 FGF1P05230 155 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 FAM236CP0DP71 79 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 COX7CP15954 63 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 PFN2P35080 140 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 NOVP48745 357 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 INSL3P51460 131 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 FOXA3P55318 350 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-201ENST00000535076 LIM2P55344 173 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 PPP1CAP62136 330 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 SUPT4H1P63272 117 aaKnown RBP4.2□□□□□ -1.74
SNHG1-201ENST00000535076 RNF144BQ7Z419 303 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 LHFPL1Q86WI0 220 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 C11orf44Q8N8P7 122 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 ZNF441Q8N8Z8 693 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 ZNF721Q8TF20 911 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 COPS9Q8WXC6 57 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 DLX4Q92988 240 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-201ENST00000535076 TMEM230Q96A57 120 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 C16orf92Q96LL3 132 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 FOXB1Q99853 325 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 PDCD1LG2Q9BQ51 273 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 TMEM147Q9BVK8 224 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 C11orf1Q9H5F2 150 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 SAP30LQ9HAJ7 183 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 RETNQ9HD89 108 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 PKIGQ9Y2B9 76 aa4.2□□□□□ -1.74
SNHG1-201ENST00000535076 PLXNA1Q9UIW2 1896 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms