RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 HIVEP2P31629 2446 aa9.9□□□□□ -0.82
SCARB1-204ENST00000535005 F8P00451 2351 aa9.9□□□□□ -0.82
SCARB1-204ENST00000535005 ANK3Q12955 4377 aaKnown RBP9.9□□□□□ -0.83
SCARB1-204ENST00000535005 PGLYRP1O75594 196 aaPredicted RBP9.89□□□□□ -0.83
SCARB1-204ENST00000535005 MBP02144 154 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 DUTP33316 252 aaKnown RBP9.89□□□□□ -0.83
SCARB1-204ENST00000535005 GALR1P47211 349 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 MEF2BQ02080 365 aaPredicted RBP9.89□□□□□ -0.83
SCARB1-204ENST00000535005 DIAPH2-AS1Q14236 149 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 CCDC144NLQ6NUI1 221 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 BRD3OSQ6XYD6 125 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 C16orf82Q7Z2V1 217 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 TMEM217Q8N7C4 229 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 ADTRPQ96IZ2 230 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 HSD17B10Q99714 261 aaKnown RBP9.89□□□□□ -0.83
SCARB1-204ENST00000535005 MEGF9Q9H1U4 602 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 MAP1LC3B2A6NCE7 125 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 CEBPZOSA8MTT3 80 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 FAM90A26D6RGX4 464 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 M0R1X1 148 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 CT45A6P0DMU7 189 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 CT45A5P0DMU8 189 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 CT45A7P0DMV0 189 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 HNF1AP20823 631 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 PSMB3P49720 205 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 THBS3P49746 956 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 NABP2Q9BQ15 211 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 MAP1LC3BQ9GZQ8 125 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 CBY1Q9Y3M2 126 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 RFNGQ9Y644 331 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 MXRA5Q9NR99 2828 aa9.89□□□□□ -0.83
SCARB1-204ENST00000535005 IGHV1-3A0A0C4DH29 117 aa9.88□□□□□ -0.83
SCARB1-204ENST00000535005 A0A0U1RQK1 487 aa9.88□□□□□ -0.83
SCARB1-204ENST00000535005 A0A1W2PPI3 338 aa9.88□□□□□ -0.83
SCARB1-204ENST00000535005 RNF212BA8MTL3 300 aa9.88□□□□□ -0.83
SCARB1-204ENST00000535005 F2RP25116 425 aa9.88□□□□□ -0.83
SCARB1-204ENST00000535005 OR10J1P30954 320 aa9.88□□□□□ -0.83
SCARB1-204ENST00000535005 ADIRFQ15847 76 aa9.88□□□□□ -0.83
SCARB1-204ENST00000535005 DYNAPQ8N1N2 210 aa9.88□□□□□ -0.83
SCARB1-204ENST00000535005 GBGT1Q8N5D6 347 aa9.88□□□□□ -0.83
SCARB1-204ENST00000535005 TCTEX1D1Q8N7M0 179 aa9.88□□□□□ -0.83
SCARB1-204ENST00000535005 OR5AN1Q8NGI8 311 aa9.88□□□□□ -0.83
SCARB1-204ENST00000535005 OR2T10Q8NGZ9 312 aa9.88□□□□□ -0.83
SCARB1-204ENST00000535005 DDB2Q92466 427 aa9.88□□□□□ -0.83
SCARB1-204ENST00000535005 MRPL20Q9BYC9 149 aaKnown RBP9.88□□□□□ -0.83
SCARB1-204ENST00000535005 ZNF705GA8MUZ8 300 aaPredicted RBP9.87□□□□□ -0.83
SCARB1-204ENST00000535005 LINC00614P0C842 121 aa9.87□□□□□ -0.83
SCARB1-204ENST00000535005 REG1BP48304 166 aa9.87□□□□□ -0.83
SCARB1-204ENST00000535005 RANP62826 216 aaKnown RBP9.87□□□□□ -0.83
SCARB1-204ENST00000535005 RPL30P62888 115 aaKnown RBP9.87□□□□□ -0.83
SCARB1-204ENST00000535005 CATR1Q13166 79 aa9.87□□□□□ -0.83
SCARB1-204ENST00000535005 ZNF726P1Q15940 193 aa9.87□□□□□ -0.83
SCARB1-204ENST00000535005 ATP6V1FQ16864 119 aa9.87□□□□□ -0.83
SCARB1-204ENST00000535005 GSX1Q9H4S2 264 aaPredicted RBP9.87□□□□□ -0.83
SCARB1-204ENST00000535005 HILPDAQ9Y5L2 63 aa9.87□□□□□ -0.83
SCARB1-204ENST00000535005 NSD1Q96L73 2696 aaPredicted RBP9.87□□□□□ -0.83
SCARB1-204ENST00000535005 LINC00473A8K010 186 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 EREGO14944 169 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 TNFSF12O43508 249 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 SYNGR2O43760 224 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 SOX15O60248 233 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 SERPINE2P07093 398 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 SNRPCP09234 159 aaKnown RBP9.86□□□□□ -0.83
SCARB1-204ENST00000535005 MC5RP33032 325 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 RPL23P62829 140 aaKnown RBP9.86□□□□□ -0.83
SCARB1-204ENST00000535005 LCN15Q6UWW0 184 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 MRPL41Q8IXM3 137 aaKnown RBP9.86□□□□□ -0.83
SCARB1-204ENST00000535005 CFHR4Q92496 578 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 WDR61Q9GZS3 305 aaKnown RBP9.86□□□□□ -0.83
SCARB1-204ENST00000535005 FKBP11Q9NYL4 201 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 CDC42EP3Q9UKI2 254 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 MTORP42345 2549 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 CTXND1A0A1B0GTU2 59 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 FAM90A9PA6NNJ1 464 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 H0YJW9 148 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 RBFOX2O43251 390 aaKnown RBP eCLIP9.86□□□□□ -0.833e-8■■■■■ 62.6
SCARB1-204ENST00000535005 CD1BP29016 333 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 CNN1P51911 297 aaKnown RBP9.86□□□□□ -0.83
SCARB1-204ENST00000535005 LINC00205P59089 165 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 MOB3BQ86TA1 216 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 BCL6BQ8N143 479 aaPredicted RBP9.86□□□□□ -0.83
SCARB1-204ENST00000535005 GPR146Q96CH1 333 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 GPHA2Q96T91 129 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 SNHG12Q9BXW3 62 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 RBKSQ9H477 322 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 SLC39A9Q9NUM3 307 aa9.86□□□□□ -0.83
SCARB1-204ENST00000535005 SOX21Q9Y651 276 aaPredicted RBP9.86□□□□□ -0.83
SCARB1-204ENST00000535005 MARCH11A6NNE9 402 aa9.85□□□□□ -0.83
SCARB1-204ENST00000535005 TIMM23O14925 209 aa9.85□□□□□ -0.83
SCARB1-204ENST00000535005 KIR2DS2P43631 304 aa9.85□□□□□ -0.83
SCARB1-204ENST00000535005 BRWD1-AS2P59051 145 aa9.85□□□□□ -0.83
SCARB1-204ENST00000535005 IL17RELQ6ZVW7 336 aa9.85□□□□□ -0.83
SCARB1-204ENST00000535005 C20orf144Q9BQM9 153 aa9.85□□□□□ -0.83
SCARB1-204ENST00000535005 RSG1Q9BU20 258 aa9.85□□□□□ -0.83
SCARB1-204ENST00000535005 LIN7CQ9NUP9 197 aaKnown RBP9.85□□□□□ -0.83
SCARB1-204ENST00000535005 PSENENQ9NZ42 101 aa9.85□□□□□ -0.83
SCARB1-204ENST00000535005 TRAV9-1A0A075B6T8 112 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 APOA2P02652 100 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 RPLP1P05386 114 aaKnown RBP9.84□□□□□ -0.83
SCARB1-204ENST00000535005 BRS3P32247 399 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms