RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 AGFG2O95081 481 aa15.72■□□□□ 0.11
SMPD1-210ENST00000534405 MPV17P39210 176 aa15.72■□□□□ 0.11
SMPD1-210ENST00000534405 SPENQ96T58 3664 aaKnown RBP15.71■□□□□ 0.11
SMPD1-210ENST00000534405 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.71■□□□□ 0.11
SMPD1-210ENST00000534405 TFF1P04155 84 aa15.71■□□□□ 0.11
SMPD1-210ENST00000534405 C5orf64Q2M2E5 130 aa15.71■□□□□ 0.11
SMPD1-210ENST00000534405 CCDC144NLQ6NUI1 221 aa15.71■□□□□ 0.11
SMPD1-210ENST00000534405 Q8IYB0 196 aa15.71■□□□□ 0.11
SMPD1-210ENST00000534405 ZDHHC16Q969W1 377 aa15.71■□□□□ 0.11
SMPD1-210ENST00000534405 BDP1A6H8Y1 2624 aa15.71■□□□□ 0.1
SMPD1-210ENST00000534405 WNT9BO14905 357 aa15.7■□□□□ 0.1
SMPD1-210ENST00000534405 FTH1P19P0C7X4 201 aa15.7■□□□□ 0.1
SMPD1-210ENST00000534405 FOXE3Q13461 319 aa15.7■□□□□ 0.1
SMPD1-210ENST00000534405 TIGITQ495A1 244 aa15.7■□□□□ 0.1
SMPD1-210ENST00000534405 IBA57Q5T440 356 aaKnown RBP15.7■□□□□ 0.1
SMPD1-210ENST00000534405 GDF5OSQ5U4N7 250 aa15.7■□□□□ 0.1
SMPD1-210ENST00000534405 ZNF826PQ6ZT77 177 aa15.7■□□□□ 0.1
SMPD1-210ENST00000534405 CXorf67Q86X51 503 aaPredicted RBP15.7■□□□□ 0.1
SMPD1-210ENST00000534405 SPCS1Q9Y6A9 102 aa15.7■□□□□ 0.1
SMPD1-210ENST00000534405 CACNA1DQ01668 2161 aa15.7■□□□□ 0.1
SMPD1-210ENST00000534405 PERPQ96FX8 193 aa15.7■□□□□ 0.1
SMPD1-210ENST00000534405 C5orf30Q96GV9 206 aa15.7■□□□□ 0.1
SMPD1-210ENST00000534405 SPATA25Q9BR10 227 aa15.7■□□□□ 0.1
SMPD1-210ENST00000534405 A0A1W2PPM0 123 aa15.69■□□□□ 0.1
SMPD1-210ENST00000534405 RPL24P83731 157 aaKnown RBP15.69■□□□□ 0.1
SMPD1-210ENST00000534405 MEF2CQ06413 473 aaPredicted RBP15.69■□□□□ 0.1
SMPD1-210ENST00000534405 LINC00173Q6ZV60 143 aa15.69■□□□□ 0.1
SMPD1-210ENST00000534405 USF3Q68DE3 2245 aa15.69■□□□□ 0.1
SMPD1-210ENST00000534405 C15orf62A8K5M9 175 aa15.69■□□□□ 0.1
SMPD1-210ENST00000534405 IQCF6A8MYZ5 107 aa15.69■□□□□ 0.1
SMPD1-210ENST00000534405 APOA2P02652 100 aa15.69■□□□□ 0.1
SMPD1-210ENST00000534405 UQCRFS1P47985 274 aa15.69■□□□□ 0.1
SMPD1-210ENST00000534405 TSSC4Q9Y5U2 329 aaPredicted RBP15.69■□□□□ 0.1
SMPD1-210ENST00000534405 ASPMQ8IZT6 3477 aa15.69■□□□□ 0.1
SMPD1-210ENST00000534405 IGHV1-24A0A0C4DH33 117 aa15.68■□□□□ 0.1
SMPD1-210ENST00000534405 LEPROTL1O95214 131 aa15.68■□□□□ 0.1
SMPD1-210ENST00000534405 KLF14Q8TD94 323 aaPredicted RBP15.68■□□□□ 0.1
SMPD1-210ENST00000534405 SH2D7A6NKC9 451 aaPredicted RBP15.68■□□□□ 0.1
SMPD1-210ENST00000534405 IGLV2-8P01709 118 aa15.68■□□□□ 0.1
SMPD1-210ENST00000534405 MGST1P10620 155 aaKnown RBP15.68■□□□□ 0.1
SMPD1-210ENST00000534405 PPOXP50336 477 aa15.68■□□□□ 0.1
SMPD1-210ENST00000534405 C11orf53Q8IXP5 236 aa15.68■□□□□ 0.1
SMPD1-210ENST00000534405 CHCHD1Q96BP2 118 aaKnown RBP15.68■□□□□ 0.1
SMPD1-210ENST00000534405 G6PCP35575 357 aa15.67■□□□□ 0.1
SMPD1-210ENST00000534405 RPL30P62888 115 aaKnown RBP15.67■□□□□ 0.1
SMPD1-210ENST00000534405 SRSF6Q13247 344 aaKnown RBP15.67■□□□□ 0.1
SMPD1-210ENST00000534405 KIR3DS1Q14943 382 aa15.67■□□□□ 0.1
SMPD1-210ENST00000534405 Q6ZR03 302 aa15.67■□□□□ 0.1
SMPD1-210ENST00000534405 TMEM178AQ8NBL3 297 aa15.67■□□□□ 0.1
SMPD1-210ENST00000534405 OR2Z1Q8NG97 314 aa15.67■□□□□ 0.1
SMPD1-210ENST00000534405 H1FXQ92522 213 aaKnown RBP15.67■□□□□ 0.1
SMPD1-210ENST00000534405 MRAP2Q96G30 205 aa15.67■□□□□ 0.1
SMPD1-210ENST00000534405 C12orf77C9JDV5 145 aa15.67■□□□□ 0.1
SMPD1-210ENST00000534405 PDLIM3Q53GG5 364 aaPredicted RBP15.67■□□□□ 0.1
SMPD1-210ENST00000534405 FOXI2Q6ZQN5 318 aa15.67■□□□□ 0.1
SMPD1-210ENST00000534405 GGTLC1Q9BX51 225 aa15.67■□□□□ 0.1
SMPD1-210ENST00000534405 OBP2BQ9NPH6 170 aa15.67■□□□□ 0.1
SMPD1-210ENST00000534405 SERTAD4Q9NUC0 356 aa15.67■□□□□ 0.1
SMPD1-210ENST00000534405 AESQ08117 197 aa15.66■□□□□ 0.1
SMPD1-210ENST00000534405 MIC13Q5XKP0 118 aa15.66■□□□□ 0.1
SMPD1-210ENST00000534405 TREML4Q6UXN2 200 aa15.66■□□□□ 0.1
SMPD1-210ENST00000534405 ZNF788Q6ZQV5 615 aa15.66■□□□□ 0.1
SMPD1-210ENST00000534405 TPRX1Q8N7U7 411 aa15.66■□□□□ 0.1
SMPD1-210ENST00000534405 TRIB1Q96RU8 372 aa15.66■□□□□ 0.1
SMPD1-210ENST00000534405 MGST2Q99735 147 aa15.66■□□□□ 0.1
SMPD1-210ENST00000534405 NAA38Q9BRA0 125 aaKnown RBP15.66■□□□□ 0.1
SMPD1-210ENST00000534405 KCNIP1Q9NZI2 227 aa15.66■□□□□ 0.1
SMPD1-210ENST00000534405 SPAARA0A1B0GVQ0 90 aa15.66■□□□□ 0.1
SMPD1-210ENST00000534405 FA2HQ7L5A8 372 aa15.66■□□□□ 0.1
SMPD1-210ENST00000534405 ZNF808Q8N4W9 903 aaPredicted RBP15.66■□□□□ 0.1
SMPD1-210ENST00000534405 MFAP2P55001 183 aa15.65■□□□□ 0.1
SMPD1-210ENST00000534405 BRWD1-AS2P59051 145 aa15.65■□□□□ 0.1
SMPD1-210ENST00000534405 FAM214BQ7L5A3 538 aa15.65■□□□□ 0.1
SMPD1-210ENST00000534405 ZNF645Q8N7E2 425 aa15.65■□□□□ 0.1
SMPD1-210ENST00000534405 COQ2Q96H96 371 aa15.65■□□□□ 0.1
SMPD1-210ENST00000534405 ZNF207O43670 478 aaKnown RBP15.65■□□□□ 0.1
SMPD1-210ENST00000534405 ZNF816Q0VGE8 651 aaPredicted RBP15.65■□□□□ 0.1
SMPD1-210ENST00000534405 EIF4EBP1Q13541 118 aaPredicted RBP15.65■□□□□ 0.1
SMPD1-210ENST00000534405 PRAMEF6Q5VXH4 476 aa15.65■□□□□ 0.1
SMPD1-210ENST00000534405 Q6ZT83 130 aa15.65■□□□□ 0.1
SMPD1-210ENST00000534405 MTURNQ8N3F0 131 aa15.65■□□□□ 0.1
SMPD1-210ENST00000534405 MAP1LC3CQ9BXW4 147 aa15.65■□□□□ 0.1
SMPD1-210ENST00000534405 FZR1Q9UM11 496 aa15.65■□□□□ 0.1
SMPD1-210ENST00000534405 ZFHX4Q86UP3 3567 aa15.64■□□□□ 0.09
SMPD1-210ENST00000534405 TMEM30CPA0ZSE6 113 aa15.64■□□□□ 0.09
SMPD1-210ENST00000534405 K7EQM0 130 aa15.64■□□□□ 0.09
SMPD1-210ENST00000534405 CA1P00915 261 aaPredicted RBP15.64■□□□□ 0.09
SMPD1-210ENST00000534405 OR5AL1P0C617 328 aa15.64■□□□□ 0.09
SMPD1-210ENST00000534405 CNEP1R1Q8N9A8 125 aa15.64■□□□□ 0.09
SMPD1-210ENST00000534405 GALMQ96C23 342 aa15.64■□□□□ 0.09
SMPD1-210ENST00000534405 IGF2BP2-AS1Q96M15 143 aa15.64■□□□□ 0.09
SMPD1-210ENST00000534405 METRNQ9UJH8 293 aa15.64■□□□□ 0.09
SMPD1-210ENST00000534405 FOXH1O75593 365 aa15.64■□□□□ 0.09
SMPD1-210ENST00000534405 FABP6P51161 128 aa15.64■□□□□ 0.09
SMPD1-210ENST00000534405 LINC00205P59089 165 aa15.64■□□□□ 0.09
SMPD1-210ENST00000534405 GUSBP1Q15486 140 aa15.64■□□□□ 0.09
SMPD1-210ENST00000534405 SPATA31B1PQ5VZV4 182 aa15.64■□□□□ 0.09
SMPD1-210ENST00000534405 INO80CQ6PI98 192 aaPredicted RBP15.64■□□□□ 0.09
SMPD1-210ENST00000534405 GEMIN7Q9H840 131 aaKnown RBP15.64■□□□□ 0.09
SMPD1-210ENST00000534405 DSPP15924 2871 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms