RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 SAXO1Q8IYX7 474 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 KRTCAP2Q8N6L1 136 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF709Q8N972 641 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 OR52E2Q8NGJ4 325 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 OR2T29Q8NH02 315 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 ZNRF2Q8NHG8 242 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 OR51E1Q8TCB6 317 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 RNF138Q8WVD3 245 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 TVP23CQ96ET8 276 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 AP1S3Q96PC3 154 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 SLC17A9Q9BYT1 436 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 POLR2J2Q9GZM3 115 aaKnown RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 NPVFQ9HCQ7 196 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 DPM3Q9P2X0 92 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 CES1P1Q9UKY3 287 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 DOCK1Q14185 1865 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 CHD9Q3L8U1 2897 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 CENPFP49454 3210 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 TRBV6-7A0A0A0MS04 114 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 A0A0G2JRQ6 117 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 CYB5AP00167 134 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 HLA-DPB1P04440 258 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 CRYGDP07320 174 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 HIST1H1DP16402 221 aaKnown RBP2.65□□□□□ -1.98
CSMD3-210ENST00000534172 NTSP30990 170 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 PYCR1P32322 319 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 HRH1P35367 487 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 FABP6P51161 128 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 STC1P52823 247 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 APOC4P55056 127 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 RPS28P62857 69 aaKnown RBP2.65□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF92Q03936 586 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 CXCL17Q6UXB2 119 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 TMEM179BQ7Z7N9 219 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 OR8G5Q8NG78 346 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 OR4K17Q8NGC6 315 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 SYNPRQ8TBG9 265 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 TMEM54Q969K7 222 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 EBPLQ9BY08 206 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 TMEM133Q9H2Q1 129 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 IFI27L2Q9H2X8 130 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 HES4Q9HCC6 221 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 FAM206AQ9NX38 181 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 PRO0628Q9UI54 55 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 FOCADQ5VW36 1801 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 NUP210LQ5VU65 1888 aa2.65□□□□□ -1.98
CSMD3-210ENST00000534172 TRIP11Q15643 1979 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 CHD3Q12873 2000 aaKnown RBP2.65□□□□□ -1.99
CSMD3-210ENST00000534172 LRRK1Q38SD2 2015 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 CNOT1A5YKK6 2376 aaKnown RBP2.65□□□□□ -1.99
CSMD3-210ENST00000534172 IGHV1OR21-1A0A087WYE8 117 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 OR2T8A6NH00 312 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 CD300LBA8K4G0 201 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 SFT2D2O95562 160 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 SPINK8P0C7L1 97 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 PPIBP23284 216 aaKnown RBP2.65□□□□□ -1.99
CSMD3-210ENST00000534172 PRTN3P24158 256 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 CD34P28906 385 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 GLRXP35754 106 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 LPAR6P43657 344 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 PSG4Q00888 419 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 CD164Q04900 197 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 PAFAH1B3Q15102 231 aaKnown RBP2.65□□□□□ -1.99
CSMD3-210ENST00000534172 PMVKQ15126 192 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 OR7A5Q15622 319 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 Q6ZVH6 145 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 ZDHHC22Q8N966 263 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 CHCHD10Q8WYQ3 142 aaPredicted RBP2.65□□□□□ -1.99
CSMD3-210ENST00000534172 STARD4Q96DR4 205 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 RASL11BQ9BPW5 248 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 EIF5A2Q9GZV4 153 aaKnown RBP2.65□□□□□ -1.99
CSMD3-210ENST00000534172 GNB4Q9HAV0 340 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 SH2D2AQ9NP31 389 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 ANXA10Q9UJ72 324 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF443Q9Y2A4 671 aaPredicted RBP2.65□□□□□ -1.99
CSMD3-210ENST00000534172 PTPRSQ13332 1948 aa2.65□□□□□ -1.99
CSMD3-210ENST00000534172 HECTD1Q9ULT8 2610 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 TINCRA0A1B0GVN0 87 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 MEIS3P1A6NDR6 274 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 CDC42EP2O14613 210 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF354AO60765 605 aaPredicted RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 OR7C1O76099 320 aaPredicted RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 HSPB1P04792 205 aaKnown RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 EIF4EP06730 217 aaKnown RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 SEC11BP0C7V7 166 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF728P0DKX0 622 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 CSRP1P21291 193 aaKnown RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 SRP14P37108 136 aaKnown RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF121P58317 390 aaPredicted RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 YPEL3P61236 119 aaPredicted RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 SNRPGP62308 76 aaKnown RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 SEC11AP67812 179 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 KLRD1Q13241 179 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 PMCHL1Q16048 86 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 TBC1D28Q2M2D7 210 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 LRRC75BQ2VPJ9 315 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 TCEAL5Q5H9L2 206 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 TMEM215Q68D42 235 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms