RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 ZNF616Q08AN1 781 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 IZUMO4Q1ZYL8 232 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 SOHLH1Q5JUK2 328 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 FAM120AOSQ5T036 256 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 Q6ZRM9 215 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 Q71RC1 249 aaPredicted RBP4.89□□□□□ -1.63
CMTM1-220ENST00000534143 FAM219AQ8IW50 185 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 FAM71E2Q8N5Q1 922 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 FAM24BQ8N5W8 94 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 Q8N6K4 173 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 HSD17B11Q8NBQ5 300 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 OR4C13Q8NGP0 309 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 PIFOQ8TCI5 191 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 FLYWCH2Q96CP2 140 aaKnown RBP4.89□□□□□ -1.63
CMTM1-220ENST00000534143 RRNAD1Q96FB5 475 aaKnown RBP4.89□□□□□ -1.63
CMTM1-220ENST00000534143 BTF3L4Q96K17 158 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 RNF5Q99942 180 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 GPR61Q9BZJ8 451 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 PRDM13Q9H4Q3 707 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 FAM96BQ9Y3D0 163 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 MMP24Q9Y5R2 645 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 SVEP1Q4LDE5 3571 aa4.89□□□□□ -1.63
CMTM1-220ENST00000534143 NSD1Q96L73 2696 aaPredicted RBP4.88□□□□□ -1.63
CMTM1-220ENST00000534143 TRAV3A0A0B4J244 114 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 MARCH11A6NNE9 402 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 UPK2O00526 184 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 AGPAT2O15120 278 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 LY6G6DO95868 133 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 MOSP00540 346 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 GCGP01275 180 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 IGKV1D-33P01593 117 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 IGKV1-33P01594 117 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 HBE1P02100 147 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 OR9G9P0C7N8 305 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 BRS3P32247 399 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 RANP62826 216 aaKnown RBP4.88□□□□□ -1.63
CMTM1-220ENST00000534143 CD69Q07108 199 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 PSG5Q15238 335 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 HAGHQ16775 308 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 MRGPRG-AS1Q2M3A8 158 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 DEFB112Q30KQ8 113 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 AARDQ4LEZ3 155 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 PYY3Q5JQD4 70 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 OR4A47Q6IF82 309 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 BTNL8Q6UX41 500 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 H2BFWTQ7Z2G1 175 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 VKORC1L1Q8N0U8 176 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 TEX29Q8N6K0 151 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 TEX45Q8NA69 505 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 NPBQ8NG41 125 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 OR4D5Q8NGN0 318 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 OR2T10Q8NGZ9 312 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 TMEM167AQ8TBQ9 72 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 PACRGQ96M98 296 aaPredicted RBP4.88□□□□□ -1.63
CMTM1-220ENST00000534143 HARBI1Q96MB7 349 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 NEU1Q99519 415 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 NIPSNAP3BQ9BS92 247 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 YAE1D1Q9NRH1 226 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 TMEM160Q9NX00 188 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 BET1LQ9NYM9 111 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 CACNG5Q9UF02 275 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 PITPNC1Q9UKF7 332 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 GOLT1BQ9Y3E0 138 aa4.88□□□□□ -1.63
CMTM1-220ENST00000534143 ZANQ9Y493 2812 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 A0A1B0GW64 132 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 PPP5D1E7EU14 171 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 RRHO14718 337 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 YIF1AO95070 293 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 NDUFA3O95167 84 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 SEC11BP0C7V7 166 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 SAA1P0DJI8 122 aaPredicted RBP4.87□□□□□ -1.63
CMTM1-220ENST00000534143 LYL1P12980 280 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 FABP4P15090 132 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 CD24P25063 80 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 CNTFRP26992 372 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 TAGLN2P37802 199 aaKnown RBP4.87□□□□□ -1.63
CMTM1-220ENST00000534143 SNCAP37840 140 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 ERVK-16P61578 105 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 TNFRSF9Q07011 255 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 PNRC1Q12796 327 aaPredicted RBP4.87□□□□□ -1.63
CMTM1-220ENST00000534143 GAGE1Q13065 139 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 FHL2Q14192 279 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 IQCJQ1A5X6 159 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 IAH1Q2TAA2 248 aaPredicted RBP4.87□□□□□ -1.63
CMTM1-220ENST00000534143 LRRC75BQ2VPJ9 315 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 CXorf66Q5JRM2 361 aaPredicted RBP4.87□□□□□ -1.63
CMTM1-220ENST00000534143 SAPCD1Q5SSQ6 148 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 FOXRED2Q8IWF2 684 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 OR4A5Q8NH83 315 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 TMEM18Q96B42 140 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 TVP23CQ96ET8 276 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 BSCL2Q96G97 398 aaPredicted RBP4.87□□□□□ -1.63
CMTM1-220ENST00000534143 ZNF48Q96MX3 618 aaPredicted RBP4.87□□□□□ -1.63
CMTM1-220ENST00000534143 SPIN2AQ99865 258 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 SPIN2BQ9BPZ2 258 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 C11orf1Q9H5F2 150 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.87□□□□□ -1.63
CMTM1-220ENST00000534143 TMEM140Q9NV12 185 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 DOK5Q9P104 306 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 SIGLEC9Q9Y336 463 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms