RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 BATF3Q9NR55 127 aa10.14□□□□□ -0.79
CAPN1-227ENST00000533909 PTTG2Q9NZH5 202 aa10.14□□□□□ -0.79
CAPN1-227ENST00000533909 HSPB7Q9UBY9 170 aa10.14□□□□□ -0.79
CAPN1-227ENST00000533909 FLVCR2Q9UPI3 526 aa10.14□□□□□ -0.79
CAPN1-227ENST00000533909 IGHV3OR16-8A0A075B7F1 116 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 C9orf170A2RU37 121 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 IZUMO1RA6ND01 250 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 IFNA21P01568 189 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 EDN2P20800 178 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 ADMP35318 185 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 CD81P60033 236 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 ETFRF1Q6IPR1 90 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 BTNL8Q6UX41 500 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 ADAMTSL5Q6ZMM2 481 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 RNASEH2CQ8TDP1 164 aaKnown RBP10.13□□□□□ -0.79
CAPN1-227ENST00000533909 GINS3Q9BRX5 216 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 WDR12Q9GZL7 423 aaKnown RBP10.13□□□□□ -0.79
CAPN1-227ENST00000533909 TUBA4BQ9H853 241 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 SELENOKQ9Y6D0 94 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 U3KQ87 197 aa10.13□□□□□ -0.79
CAPN1-227ENST00000533909 C15orf62A8K5M9 175 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 F8W735 103 aaPredicted RBP10.12□□□□□ -0.79
CAPN1-227ENST00000533909 ZNF207O43670 478 aaKnown RBP10.12□□□□□ -0.79
CAPN1-227ENST00000533909 MED6O75586 246 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 SCAF4O95104 1147 aaKnown RBP10.12□□□□□ -0.79
CAPN1-227ENST00000533909 IFNA4P05014 189 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 OR4E1P0C645 316 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 NHLRC4P0CG21 123 aaPredicted RBP10.12□□□□□ -0.79
CAPN1-227ENST00000533909 ANXA7P20073 488 aaKnown RBP10.12□□□□□ -0.79
CAPN1-227ENST00000533909 BMI1P35226 326 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 DHRS2Q13268 280 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 ZNF846Q147U1 533 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 BSXQ3C1V8 233 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 C2orf83Q53S99 150 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 LAMTOR1Q6IAA8 161 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 MZT2BQ6NZ67 158 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 SLC16A13Q7RTY0 426 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 LYG2Q86SG7 212 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 WDR89Q96FK6 387 aaPredicted RBP10.12□□□□□ -0.79
CAPN1-227ENST00000533909 ASCL2Q99929 193 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 C20orf85Q9H1P6 137 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 MLXQ9UH92 298 aa10.12□□□□□ -0.79
CAPN1-227ENST00000533909 PAIP2BQ9ULR5 123 aaKnown RBP10.12□□□□□ -0.79
CAPN1-227ENST00000533909 TRAV30A0A087WSZ9 112 aa10.11□□□□□ -0.79
CAPN1-227ENST00000533909 FAM90A26D6RGX4 464 aa10.11□□□□□ -0.79
CAPN1-227ENST00000533909 K7EMT4 169 aa10.11□□□□□ -0.79
CAPN1-227ENST00000533909 FRMD6-AS1P0C7T7 363 aa10.11□□□□□ -0.79
CAPN1-227ENST00000533909 SLC25A4P12235 298 aa10.11□□□□□ -0.79
CAPN1-227ENST00000533909 SLC25A6P12236 298 aa10.11□□□□□ -0.79
CAPN1-227ENST00000533909 BTCP35070 178 aa10.11□□□□□ -0.79
CAPN1-227ENST00000533909 ATP5IP56385 69 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-227ENST00000533909 RPP30P78346 268 aaKnown RBP10.11□□□□□ -0.79
CAPN1-227ENST00000533909 GGNBP1Q5YKI7 109 aa10.11□□□□□ -0.79
CAPN1-227ENST00000533909 PVRIGQ6DKI7 326 aa10.11□□□□□ -0.79
CAPN1-227ENST00000533909 ZNF600Q6ZNG1 722 aa10.11□□□□□ -0.79
CAPN1-227ENST00000533909 TMEM61Q8N0U2 210 aa10.11□□□□□ -0.79
CAPN1-227ENST00000533909 OR52B4Q8NGK2 314 aa10.11□□□□□ -0.79
CAPN1-227ENST00000533909 CIB3Q96Q77 187 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-227ENST00000533909 NEURL2Q9BR09 285 aa10.11□□□□□ -0.79
CAPN1-227ENST00000533909 TRAV6A0A075B6T7 132 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 TRAV14DV4A0A0A6YYC5 116 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 TRAV25A0A0B4J276 109 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 FAM240BA0A1B0GVZ2 78 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 WRBO00258 174 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 PLA2G10O15496 165 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 CLN5O75503 358 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 TMEM50AO95807 157 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 C8orf88P0DMB2 117 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 IGHV4-30-4P0DP06 118 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 IAPPP10997 89 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 RND2P52198 227 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 RAB11AP62491 216 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 TMEM116Q8NCL8 245 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 OR4X1Q8NH49 305 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 ACY3Q96HD9 319 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 FNDC4Q9H6D8 234 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-227ENST00000533909 NUDT15Q9NV35 164 aa10.1□□□□□ -0.79
CAPN1-227ENST00000533909 IGHV7-4-1A0A0J9YVY3 117 aa10.09□□□□□ -0.79
CAPN1-227ENST00000533909 ZNF785A8K8V0 405 aa10.09□□□□□ -0.79
CAPN1-227ENST00000533909 ADAP1O75689 374 aa10.09□□□□□ -0.79
CAPN1-227ENST00000533909 TCRBP04435 133 aa10.09□□□□□ -0.79
CAPN1-227ENST00000533909 MLANAQ16655 118 aa10.09□□□□□ -0.79
CAPN1-227ENST00000533909 TOMM20LQ6UXN7 152 aa10.09□□□□□ -0.79
CAPN1-227ENST00000533909 Q8N1Y9 231 aa10.09□□□□□ -0.79
CAPN1-227ENST00000533909 NARS2Q96I59 477 aaKnown RBP10.09□□□□□ -0.79
CAPN1-227ENST00000533909 MAGT1Q9H0U3 335 aa10.09□□□□□ -0.79
CAPN1-227ENST00000533909 PUS1Q9Y606 427 aaKnown RBP eCLIP10.09□□□□□ -0.79
CAPN1-227ENST00000533909 IGHV3-49A0A0A0MS15 119 aa10.08□□□□□ -0.8
CAPN1-227ENST00000533909 SYNGR2O43760 224 aa10.08□□□□□ -0.8
CAPN1-227ENST00000533909 PITX3O75364 302 aa10.08□□□□□ -0.8
CAPN1-227ENST00000533909 OR10J1P30954 320 aa10.08□□□□□ -0.8
CAPN1-227ENST00000533909 TIGITQ495A1 244 aa10.08□□□□□ -0.8
CAPN1-227ENST00000533909 C11orf87Q6NUJ2 197 aa10.08□□□□□ -0.8
CAPN1-227ENST00000533909 PRSS54Q6PEW0 395 aa10.08□□□□□ -0.8
CAPN1-227ENST00000533909 OR1S2Q8NGQ3 325 aa10.08□□□□□ -0.8
CAPN1-227ENST00000533909 ENKURQ8TC29 256 aa10.08□□□□□ -0.8
CAPN1-227ENST00000533909 SLC35E1Q96K37 410 aa10.08□□□□□ -0.8
CAPN1-227ENST00000533909 OR10C1Q96KK4 312 aa10.08□□□□□ -0.8
CAPN1-227ENST00000533909 RHPN1-AS1Q9BWJ2 59 aa10.08□□□□□ -0.8
CAPN1-227ENST00000533909 TMEM231Q9H6L2 316 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms