RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 CRYBB3P26998 211 aa13.05□□□□□ -0.32
UBXN1-216ENST00000533908 SNCAP37840 140 aa13.05□□□□□ -0.32
UBXN1-216ENST00000533908 Q6ZTC4 211 aa13.05□□□□□ -0.32
UBXN1-216ENST00000533908 CSNK1G2-AS1Q8NCQ2 148 aa13.05□□□□□ -0.32
UBXN1-216ENST00000533908 SCPEP1Q9HB40 452 aa13.05□□□□□ -0.32
UBXN1-216ENST00000533908 A0A0G2JRQ6 117 aa13.04□□□□□ -0.32
UBXN1-216ENST00000533908 C11orf94C9JXX5 98 aa13.04□□□□□ -0.32
UBXN1-216ENST00000533908 IGKV1-17P01599 117 aa13.04□□□□□ -0.32
UBXN1-216ENST00000533908 APOA1P02647 267 aa13.04□□□□□ -0.32
UBXN1-216ENST00000533908 ZNF688P0C7X2 276 aa13.04□□□□□ -0.32
UBXN1-216ENST00000533908 ELK1P19419 428 aa13.04□□□□□ -0.32
UBXN1-216ENST00000533908 RCVRNP35243 200 aa13.04□□□□□ -0.32
UBXN1-216ENST00000533908 RND3P61587 244 aa13.04□□□□□ -0.32
UBXN1-216ENST00000533908 LHFPL1Q86WI0 220 aa13.04□□□□□ -0.32
UBXN1-216ENST00000533908 STXBP6Q8NFX7 210 aa13.04□□□□□ -0.32
UBXN1-216ENST00000533908 DCANP1Q8TF63 244 aa13.04□□□□□ -0.32
UBXN1-216ENST00000533908 CLEC5AQ9NY25 188 aa13.04□□□□□ -0.32
UBXN1-216ENST00000533908 CLN5O75503 358 aa13.03□□□□□ -0.32
UBXN1-216ENST00000533908 IFNA17P01571 189 aa13.03□□□□□ -0.32
UBXN1-216ENST00000533908 MIFP14174 115 aa13.03□□□□□ -0.32
UBXN1-216ENST00000533908 P2RY1P47900 373 aa13.03□□□□□ -0.32
UBXN1-216ENST00000533908 SP6Q3SY56 376 aa13.03□□□□□ -0.32
UBXN1-216ENST00000533908 Q6ZRM9 215 aa13.03□□□□□ -0.32
UBXN1-216ENST00000533908 SLC35G3Q8N808 338 aa13.03□□□□□ -0.32
UBXN1-216ENST00000533908 OR4X1Q8NH49 305 aa13.03□□□□□ -0.32
UBXN1-216ENST00000533908 GRAMD2BQ96HH9 432 aa13.03□□□□□ -0.32
UBXN1-216ENST00000533908 U3KQE9 123 aa13.03□□□□□ -0.32
UBXN1-216ENST00000533908 SMIM31A0A1B0GVY4 71 aa13.02□□□□□ -0.33
UBXN1-216ENST00000533908 HPGDSO60760 199 aa13.02□□□□□ -0.33
UBXN1-216ENST00000533908 PGAM2P15259 253 aa13.02□□□□□ -0.33
UBXN1-216ENST00000533908 PIGPP57054 158 aa13.02□□□□□ -0.33
UBXN1-216ENST00000533908 NCS1P62166 190 aa13.02□□□□□ -0.33
UBXN1-216ENST00000533908 TIGITQ495A1 244 aa13.02□□□□□ -0.33
UBXN1-216ENST00000533908 MORN3Q6PF18 240 aaPredicted RBP13.02□□□□□ -0.33
UBXN1-216ENST00000533908 SCRT1Q9BWW7 348 aa13.02□□□□□ -0.33
UBXN1-216ENST00000533908 TMEM231Q9H6L2 316 aa13.02□□□□□ -0.33
UBXN1-216ENST00000533908 KLK11Q9UBX7 282 aa13.02□□□□□ -0.33
UBXN1-216ENST00000533908 CELA1Q9UNI1 258 aa13.02□□□□□ -0.33
UBXN1-216ENST00000533908 FAT2Q9NYQ8 4349 aa13.02□□□□□ -0.33
UBXN1-216ENST00000533908 IGHV4-4A0A075B6R2 117 aa13.01□□□□□ -0.33
UBXN1-216ENST00000533908 A0A1W2PS18 150 aa13.01□□□□□ -0.33
UBXN1-216ENST00000533908 SPP1P10451 314 aa13.01□□□□□ -0.33
UBXN1-216ENST00000533908 BSXQ3C1V8 233 aa13.01□□□□□ -0.33
UBXN1-216ENST00000533908 RNASE12Q5GAN4 147 aaKnown RBP13.01□□□□□ -0.33
UBXN1-216ENST00000533908 ACTL10Q5JWF8 245 aa13.01□□□□□ -0.33
UBXN1-216ENST00000533908 ZNF767PQ75MW2 155 aa13.01□□□□□ -0.33
UBXN1-216ENST00000533908 TMEM230Q96A57 120 aa13.01□□□□□ -0.33
UBXN1-216ENST00000533908 METTL26Q96S19 204 aa13.01□□□□□ -0.33
UBXN1-216ENST00000533908 RAB40CQ96S21 281 aa13.01□□□□□ -0.33
UBXN1-216ENST00000533908 DNAH17Q9UFH2 4485 aa13□□□□□ -0.33
UBXN1-216ENST00000533908 DNAH2Q9P225 4427 aa13□□□□□ -0.33
UBXN1-216ENST00000533908 TRAV10A0A0B4J240 114 aa13□□□□□ -0.33
UBXN1-216ENST00000533908 C3orf85A0A1B0GTC6 90 aa13□□□□□ -0.33
UBXN1-216ENST00000533908 A0A1B0GVY2 172 aa13□□□□□ -0.33
UBXN1-216ENST00000533908 OPRK1P41145 380 aa13□□□□□ -0.33
UBXN1-216ENST00000533908 RPL5P46777 297 aaKnown RBP13□□□□□ -0.33
UBXN1-216ENST00000533908 AKR1C2P52895 323 aa13□□□□□ -0.33
UBXN1-216ENST00000533908 SUB1P53999 127 aaKnown RBP eCLIP13□□□□□ -0.33
UBXN1-216ENST00000533908 C12orf74Q32Q52 190 aa13□□□□□ -0.33
UBXN1-216ENST00000533908 TMEM41BQ5BJD5 291 aa13□□□□□ -0.33
UBXN1-216ENST00000533908 CORTO00230 105 aa12.99□□□□□ -0.33
UBXN1-216ENST00000533908 CD3DP04234 171 aa12.99□□□□□ -0.33
UBXN1-216ENST00000533908 OR4D10Q8NGI6 311 aa12.99□□□□□ -0.33
UBXN1-216ENST00000533908 GLMPQ8WWB7 406 aa12.99□□□□□ -0.33
UBXN1-216ENST00000533908 ZNF486Q96H40 463 aaPredicted RBP12.99□□□□□ -0.33
UBXN1-216ENST00000533908 TBC1D24Q9ULP9 559 aa12.99□□□□□ -0.33
UBXN1-216ENST00000533908 HOXA1P49639 335 aaPredicted RBP12.98□□□□□ -0.33
UBXN1-216ENST00000533908 VBP1P61758 197 aa12.98□□□□□ -0.33
UBXN1-216ENST00000533908 DHRS2Q13268 280 aa12.98□□□□□ -0.33
UBXN1-216ENST00000533908 C16orf54Q6UWD8 224 aa12.98□□□□□ -0.33
UBXN1-216ENST00000533908 OR52I2Q8NH67 350 aa12.98□□□□□ -0.33
UBXN1-216ENST00000533908 RNF126Q9BV68 326 aa12.98□□□□□ -0.33
UBXN1-216ENST00000533908 IGLC1P0CG04 106 aa12.97□□□□□ -0.33
UBXN1-216ENST00000533908 UCP1P25874 307 aa12.97□□□□□ -0.33
UBXN1-216ENST00000533908 AARDQ4LEZ3 155 aa12.97□□□□□ -0.33
UBXN1-216ENST00000533908 RNASE10Q5GAN6 216 aaKnown RBP12.97□□□□□ -0.33
UBXN1-216ENST00000533908 PSMG4Q5JS54 123 aa12.97□□□□□ -0.33
UBXN1-216ENST00000533908 TMEM170AQ8WVE7 144 aa12.97□□□□□ -0.33
UBXN1-216ENST00000533908 PDCD10Q9BUL8 212 aa12.97□□□□□ -0.33
UBXN1-216ENST00000533908 FUNDC2Q9BWH2 189 aa12.97□□□□□ -0.33
UBXN1-216ENST00000533908 DHODHQ02127 395 aa12.96□□□□□ -0.33
UBXN1-216ENST00000533908 TRIM16LQ309B1 348 aa12.96□□□□□ -0.33
UBXN1-216ENST00000533908 PRSS54Q6PEW0 395 aa12.96□□□□□ -0.33
UBXN1-216ENST00000533908 ARRDC1Q8N5I2 433 aa12.96□□□□□ -0.33
UBXN1-216ENST00000533908 OR13C8Q8NGS7 320 aa12.96□□□□□ -0.33
UBXN1-216ENST00000533908 TERB2Q8NHR7 220 aa12.96□□□□□ -0.33
UBXN1-216ENST00000533908 LHFPL5Q8TAF8 219 aa12.96□□□□□ -0.33
UBXN1-216ENST00000533908 ABHD1Q96SE0 405 aa12.96□□□□□ -0.33
UBXN1-216ENST00000533908 ENY2Q9NPA8 101 aa12.96□□□□□ -0.33
UBXN1-216ENST00000533908 MTFP1Q9UDX5 166 aa12.96□□□□□ -0.33
UBXN1-216ENST00000533908 TRAV30A0A087WSZ9 112 aa12.95□□□□□ -0.34
UBXN1-216ENST00000533908 A0A087WXM4 84 aa12.95□□□□□ -0.34
UBXN1-216ENST00000533908 DEFB131BA0A096LNP1 70 aa12.95□□□□□ -0.34
UBXN1-216ENST00000533908 ATG12O94817 140 aa12.95□□□□□ -0.34
UBXN1-216ENST00000533908 NXPH3O95157 252 aa12.95□□□□□ -0.34
UBXN1-216ENST00000533908 RND2P52198 227 aa12.95□□□□□ -0.34
UBXN1-216ENST00000533908 SPCS3P61009 180 aa12.95□□□□□ -0.34
UBXN1-216ENST00000533908 USF2Q15853 346 aaPredicted RBP12.95□□□□□ -0.34
UBXN1-216ENST00000533908 LINC00336Q6ZUF6 198 aa12.95□□□□□ -0.34
UBXN1-216ENST00000533908 MARCH1Q8TCQ1 289 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms