RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 LYZL4Q96KX0 146 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 DCTN5Q9BTE1 182 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 GNB1LQ9BYB4 327 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 SEMA5BQ9P283 1151 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 PSME4Q14997 1843 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 SAA2-SAA4A0A096LPE2 208 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 TRAV8-6A0A0B4J262 113 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 TCRBV4S1A1TA0A5B7 111 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 HIGD1CA8MV81 97 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 NBR2O15453 112 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 SAA2P0DJI9 122 aaPredicted RBP5.86□□□□□ -1.47
CTNND1-236ENST00000533667 GPR183P32249 361 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 SSBP2P81877 361 aaPredicted RBP5.86□□□□□ -1.47
CTNND1-236ENST00000533667 CD69Q07108 199 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 FAM27E3Q08E93 113 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 LHFPL1Q86WI0 220 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 PAQR4Q8N4S7 273 aaPredicted RBP5.86□□□□□ -1.47
CTNND1-236ENST00000533667 OR4X2Q8NGF9 303 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 TRBV24-1A0A075B6N3 115 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 IGHV3OR16-12A0A075B7B8 117 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 IGKV1D-13A0A0B4J2D9 117 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 H0YIZ8 118 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 HIST1H2BKO60814 126 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 IGHV3-48P01763 117 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 HIST1H2BJP06899 126 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 IGKV1-13P0DP09 117 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 CRYGSP22914 178 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 HIST1H2BOP23527 126 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 HIST1H2BBP33778 126 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 HIST1H2BDP58876 126 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 HIST1H2BCP62807 126 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 CFHR1Q03591 330 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 BSPH1Q075Z2 132 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 HIST2H2BEQ16778 126 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.86□□□□□ -1.47
CTNND1-236ENST00000533667 HIST1H2BHQ93079 126 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 HIST1H2BNQ99877 126 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 HIST1H2BMQ99879 126 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 WNT10AQ9GZT5 417 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 NRN1Q9NPD7 142 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 MTCL1Q9Y4B5 1905 aaKnown RBP5.85□□□□□ -1.47
CTNND1-236ENST00000533667 GHRHP01286 108 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 CD5P06127 495 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 CEACAM1P13688 526 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 CACNG7P62955 275 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 ST6GALNAC3Q8NDV1 305 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 ZNF837Q96EG3 531 aaPredicted RBP5.85□□□□□ -1.47
CTNND1-236ENST00000533667 FOXC2Q99958 501 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 EPDR1Q9UM22 224 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 MYOD1P15172 320 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 CHCHD1Q96BP2 118 aaKnown RBP5.85□□□□□ -1.47
CTNND1-236ENST00000533667 KLHDC3Q9BQ90 382 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 SNHG12Q9BXW3 62 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 C11orf68Q9H3H3 251 aaKnown RBP5.85□□□□□ -1.47
CTNND1-236ENST00000533667 NXT2Q9NPJ8 142 aaKnown RBP5.85□□□□□ -1.47
CTNND1-236ENST00000533667 DNAJC13O75165 2243 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 LOC285556D6RIA3 1793 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 GAGE12JA6NER3 117 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 M0R381 172 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 GAGE7O76087 117 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 GAGE12FP0CL80 117 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 GAGE12GP0CL81 117 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 GAGE12IP0CL82 117 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 TDGF1P13385 188 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 GAGE4Q13068 117 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 HEPN1Q6WQI6 88 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 MGST2Q99735 147 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 C20orf144Q9BQM9 153 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 TMEM133Q9H2Q1 129 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 TRAV9-2A0A087WT02 112 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 SERF1AO75920 110 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 PSG1P11464 419 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 DUTP33316 252 aaKnown RBP5.85□□□□□ -1.47
CTNND1-236ENST00000533667 MORN3Q6PF18 240 aaPredicted RBP5.85□□□□□ -1.47
CTNND1-236ENST00000533667 LINC01560Q8TB33 94 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 GFI1Q99684 422 aa5.85□□□□□ -1.47
CTNND1-236ENST00000533667 RASL11AQ6T310 242 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 ZNF664Q8N3J9 261 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 SMIM20Q8N5G0 67 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 C9orf106Q8NAJ2 232 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 RNASE6Q93091 150 aaKnown RBP5.84□□□□□ -1.47
CTNND1-236ENST00000533667 FNDC4Q9H6D8 234 aaPredicted RBP5.84□□□□□ -1.47
CTNND1-236ENST00000533667 SIPA1L1O43166 1804 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 PRR32B1ATL7 298 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 HBDP02042 147 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 LEPP41159 167 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 ZFP36L1Q07352 338 aaKnown RBP5.84□□□□□ -1.47
CTNND1-236ENST00000533667 CD300EQ496F6 205 aaPredicted RBP5.84□□□□□ -1.47
CTNND1-236ENST00000533667 RNF125Q96EQ8 232 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 C18orf15Q96N68 181 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 C1orf43Q9BWL3 253 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 TMEM126AQ9H061 195 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 PEMTQ9UBM1 199 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 TRAV8-2A0A0B4J237 113 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 CD5LO43866 347 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 NDUFC2O95298 119 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 GAGE13Q4V321 117 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 CRIPAKQ8N1N5 446 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 SLC25A2Q9BXI2 301 aa5.84□□□□□ -1.47
CTNND1-236ENST00000533667 TPRP12270 2363 aaKnown RBP5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms