RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 ZFAND6Q6FIF0 208 aa8.93□□□□□ -0.98
COLCA1-203ENST00000532918 PGLYRP4Q96LB8 373 aa8.93□□□□□ -0.98
COLCA1-203ENST00000532918 ANKRD36A6QL64 1941 aa8.93□□□□□ -0.98
COLCA1-203ENST00000532918 IGKV3OR2-268A0A0C4DH90 116 aa8.93□□□□□ -0.98
COLCA1-203ENST00000532918 IGHV3-48P01763 117 aa8.93□□□□□ -0.98
COLCA1-203ENST00000532918 PSMG4Q5JS54 123 aa8.93□□□□□ -0.98
COLCA1-203ENST00000532918 S4R3C0 116 aa8.93□□□□□ -0.98
COLCA1-203ENST00000532918 ZNF646O15015 1829 aaPredicted RBP8.93□□□□□ -0.98
COLCA1-203ENST00000532918 CRYBB3P26998 211 aa8.93□□□□□ -0.98
COLCA1-203ENST00000532918 PAX8Q06710 450 aa8.93□□□□□ -0.98
COLCA1-203ENST00000532918 SRSF4Q08170 494 aaKnown RBP8.93□□□□□ -0.98
COLCA1-203ENST00000532918 C14orf144Q96I85 54 aa8.93□□□□□ -0.98
COLCA1-203ENST00000532918 NINQ8N4C6 2090 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 FAM90A9PA6NNJ1 464 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 AGAP20933 346 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 TPTE2P1Q5T6R2 138 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 NDUFAF3Q9BU61 184 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 CYSLTR1Q9Y271 337 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 COX11Q9Y6N1 276 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 ZFC3H1O60293 1989 aaKnown RBP8.92□□□□□ -0.98
COLCA1-203ENST00000532918 H3BUT2 72 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 TEX38Q6PEX7 206 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 HEPN1Q6WQI6 88 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 TCF23Q7RTU1 214 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 OR11H4Q8NGC9 324 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 TMEM190Q8WZ59 177 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 H3BTX0 84 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 IGHV1-8P0DP01 117 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 SRSF6Q13247 344 aaKnown RBP8.92□□□□□ -0.98
COLCA1-203ENST00000532918 ZNF660Q6AZW8 331 aaPredicted RBP8.92□□□□□ -0.98
COLCA1-203ENST00000532918 OR52E5Q8NH55 327 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 LAMTOR2Q9Y2Q5 125 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 TRAV8-6A0A0B4J262 113 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 H3BUX3 64 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 POU2AF1Q16633 256 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 C11orf44Q8N8P7 122 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 RPUSD1Q9UJJ7 312 aaKnown RBP8.92□□□□□ -0.98
COLCA1-203ENST00000532918 LCTP09848 1927 aa8.92□□□□□ -0.98
COLCA1-203ENST00000532918 TRGV11A0A075B6L2 103 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 CXCL2P19875 107 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 KLK2P20151 261 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 PIP4P1Q86T03 277 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 NEU1Q99519 415 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 C2orf88Q9BSF0 95 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 C15orf61A6NNL5 157 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 SUMO2P61956 95 aaKnown RBP8.91□□□□□ -0.98
COLCA1-203ENST00000532918 OR4D5Q8NGN0 318 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 FMC1Q96HJ9 113 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 ZNF414Q96IQ9 312 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 FBLN5Q9UBX5 448 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 RNF223E7ERA6 249 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 RNASE4P34096 147 aaKnown RBP8.91□□□□□ -0.98
COLCA1-203ENST00000532918 MSMBP08118 114 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 IGFBP3P17936 291 aaPredicted RBP8.91□□□□□ -0.98
COLCA1-203ENST00000532918 C3orf36Q3SXR2 165 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 SPSB3Q6PJ21 355 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 BIVMQ86UB2 503 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 VGLL1Q99990 258 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 DOCK6Q96HP0 2047 aa8.91□□□□□ -0.98
COLCA1-203ENST00000532918 TRAV8-4A0A0B4J246 113 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 OR10W1Q8NGF6 305 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 USMG5Q96IX5 58 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 NPCDR1Q9BY65 106 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 TRBV20OR9-2A0A075B6H5 130 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 GRIFINA4D1Z8 144 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 J3QLI3 93 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 OVOL1O14753 267 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 TMEM50AO95807 157 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 CIARTQ8N365 385 aaPredicted RBP8.9□□□□□ -0.98
COLCA1-203ENST00000532918 ASCL2Q99929 193 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 ICE1Q9Y2F5 2266 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 TRAV24A0A0B4J272 114 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 TMEM144Q7Z5S9 345 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 RNF125Q96EQ8 232 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 CCDC88CQ9P219 2028 aa8.9□□□□□ -0.98
COLCA1-203ENST00000532918 IGFBP2P18065 325 aa8.9□□□□□ -0.99
COLCA1-203ENST00000532918 Q6AWC8 147 aa8.9□□□□□ -0.99
COLCA1-203ENST00000532918 Q96MF0 132 aa8.9□□□□□ -0.99
COLCA1-203ENST00000532918 ZNF585BQ52M93 769 aa8.9□□□□□ -0.99
COLCA1-203ENST00000532918 TMEM200BQ69YZ2 307 aa8.9□□□□□ -0.99
COLCA1-203ENST00000532918 LRTM2Q8N967 370 aa8.9□□□□□ -0.99
COLCA1-203ENST00000532918 BPESC1Q9GZL8 116 aa8.9□□□□□ -0.99
COLCA1-203ENST00000532918 SPANXA1Q9NS26 97 aa8.9□□□□□ -0.99
COLCA1-203ENST00000532918 H3BRM9 83 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 CRPP02741 224 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 SRSF7Q16629 238 aaKnown RBP eCLIP8.89□□□□□ -0.99
COLCA1-203ENST00000532918 KIAA1644Q3SXP7 199 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 C1QTNF4Q9BXJ3 329 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 OTORQ9NRC9 128 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 TRGV4A0A0C4DH28 118 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 LOC105371267A0A1B0GV96 52 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 ZNF474Q6S9Z5 364 aaPredicted RBP8.89□□□□□ -0.99
COLCA1-203ENST00000532918 LYZL4Q96KX0 146 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 E9PQ18 207 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 M0R381 172 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 APOMO95445 188 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 EFNA2O43921 213 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 C2orf68Q2NKX9 166 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 DTX1Q86Y01 620 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 MESP1Q9BRJ9 268 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms