RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 KCNK17Q96T54 332 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 LSM4Q9Y4Z0 139 aaKnown RBP6.81□□□□□ -1.32
CTNND1-231ENST00000532463 MSGN1A6NI15 193 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 IGHG2P01859 326 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 ZNF703Q9H7S9 590 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-231ENST00000532463 MRPL27Q9P0M9 148 aaKnown RBP6.81□□□□□ -1.32
CTNND1-231ENST00000532463 V9GYY9 64 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 MYO7AQ13402 2215 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 A8MWP6 167 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 UCP1P25874 307 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 MORN5Q5VZ52 161 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 VN1R4Q7Z5H5 301 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 SMIM2Q9BVW6 85 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 WBP1LQ9NX94 342 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 S4R3C0 116 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 AKAP12Q02952 1782 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 F6UB75 175 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 IGLV3-25P01717 112 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 PRB3Q04118 309 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-231ENST00000532463 RNF125Q96EQ8 232 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 U3KQE9 123 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 K7EP34 96 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 RPL39P5Q59GN2 51 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 ZNF362Q5T0B9 420 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-231ENST00000532463 SPTSSBQ8NFR3 76 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 NUP205Q92621 2012 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 IGLV3-16A0A075B6K0 115 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 LINC01555Q8NAE3 123 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 RCHY1Q96PM5 261 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 PCM1Q15154 2024 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 K7ERS5 55 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 COX5BP10606 129 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 SPXQ9BT56 116 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 KNL1Q8NG31 2342 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 TRAV14DV4A0A0A6YYC5 116 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 AHRRA9YTQ3 701 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 TM4SF5O14894 197 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 TAL2Q16559 108 aa6.8□□□□□ -1.32
CTNND1-231ENST00000532463 SLC25A39Q9BZJ4 359 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-231ENST00000532463 ACYP1P07311 99 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 ATP5J2P56134 94 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 DEFB124Q8NES8 71 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 FGF11Q92914 225 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 CARD19Q96LW7 228 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 IGKV1D-33P01593 117 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 IGKV1-33P01594 117 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 MPZP25189 248 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 TIMP3P35625 211 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 RPL34P49207 117 aaKnown RBP6.79□□□□□ -1.32
CTNND1-231ENST00000532463 DUX4L9Q6RFH8 374 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-231ENST00000532463 ZPLD1Q8TCW7 415 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 TMEM14DPA8MWL7 114 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 ATOX1O00244 68 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 EFEMP2O95967 443 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 GATA2P23769 480 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-231ENST00000532463 LCN12Q6JVE5 192 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 CD200R1LQ6Q8B3 271 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 DEFB123Q8N688 67 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 TMEM158Q8WZ71 300 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 SRSF8Q9BRL6 282 aaKnown RBP6.79□□□□□ -1.32
CTNND1-231ENST00000532463 TTTY12Q9BZ98 90 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 RNF115Q9Y4L5 304 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 FGF6P10767 208 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 RGPD8O14715 1765 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-231ENST00000532463 IGHV3OR16-8A0A075B7F1 116 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 TCRBV4S1A1TA0A5B7 111 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 PRR33A8MZF0 331 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 J3QW42 95 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 GREM1O60565 184 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 TRIP6Q15654 476 aaKnown RBP6.79□□□□□ -1.32
CTNND1-231ENST00000532463 LCNL1Q6ZST4 164 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 IMMP1LQ96LU5 166 aa6.79□□□□□ -1.32
CTNND1-231ENST00000532463 KLF5Q13887 457 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-231ENST00000532463 TMEM240Q5SV17 173 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 SLC25A47Q6Q0C1 308 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 C9orf40Q8IXQ3 194 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 CSTL1Q9H114 145 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 SCRT2Q9NQ03 307 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 LRRC37A3O60309 1634 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 FER1L6Q2WGJ9 1857 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 KDM3BQ7LBC6 1761 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 ZNF561-AS1K7EIQ3 104 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 TAX1BP3O14907 124 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 FAM104BQ5XKR9 115 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 Q6ZNB5 142 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 NWD2Q9ULI1 1742 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 A0A1B0GX51 115 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 RNF222A6NCQ9 220 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 EREGO14944 169 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 FOXG1P55316 489 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-231ENST00000532463 ZNF664Q8N3J9 261 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 TINCRA0A1B0GVN0 87 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 OR11H6Q8NGC7 330 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 KLF14Q8TD94 323 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-231ENST00000532463 SHROOM3Q8TF72 1996 aa6.78□□□□□ -1.32
CTNND1-231ENST00000532463 NUP214P35658 2090 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-231ENST00000532463 COLCA2A8K830 154 aa6.77□□□□□ -1.32
CTNND1-231ENST00000532463 CTSBP07858 339 aa6.77□□□□□ -1.32
CTNND1-231ENST00000532463 UCNP55089 124 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms