RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 YIF1AO95070 293 aa17.25■□□□□ 0.35
CAPN1-222ENST00000532285 OPRK1P41145 380 aa17.25■□□□□ 0.35
CAPN1-222ENST00000532285 ZNF414Q96IQ9 312 aa17.25■□□□□ 0.35
CAPN1-222ENST00000532285 OR10C1Q96KK4 312 aa17.25■□□□□ 0.35
CAPN1-222ENST00000532285 RCHY1Q96PM5 261 aa17.25■□□□□ 0.35
CAPN1-222ENST00000532285 TM2D3Q9BRN9 247 aa17.25■□□□□ 0.35
CAPN1-222ENST00000532285 DUXBA0A1W2PPF3 345 aa17.24■□□□□ 0.35
CAPN1-222ENST00000532285 NAP1L6A6NFF2 107 aa17.24■□□□□ 0.35
CAPN1-222ENST00000532285 ZNF207O43670 478 aaKnown RBP17.24■□□□□ 0.35
CAPN1-222ENST00000532285 TMEM50AO95807 157 aa17.24■□□□□ 0.35
CAPN1-222ENST00000532285 RBMS2Q15434 407 aaKnown RBP17.24■□□□□ 0.35
CAPN1-222ENST00000532285 C2orf83Q53S99 150 aa17.24■□□□□ 0.35
CAPN1-222ENST00000532285 LAMTOR1Q6IAA8 161 aa17.24■□□□□ 0.35
CAPN1-222ENST00000532285 OR52B4Q8NGK2 314 aa17.24■□□□□ 0.35
CAPN1-222ENST00000532285 HIPK2Q9H2X6 1198 aa17.24■□□□□ 0.35
CAPN1-222ENST00000532285 STAB2Q8WWQ8 2551 aa17.23■□□□□ 0.35
CAPN1-222ENST00000532285 VAMP1P23763 118 aa17.23■□□□□ 0.35
CAPN1-222ENST00000532285 HAGHQ16775 308 aa17.23■□□□□ 0.35
CAPN1-222ENST00000532285 CENPSQ8N2Z9 138 aa17.23■□□□□ 0.35
CAPN1-222ENST00000532285 DEFB125Q8N687 156 aa17.23■□□□□ 0.35
CAPN1-222ENST00000532285 SDHCQ99643 169 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-222ENST00000532285 FNDC4Q9H6D8 234 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-222ENST00000532285 HSPB7Q9UBY9 170 aa17.23■□□□□ 0.35
CAPN1-222ENST00000532285 SMPXQ9UHP9 88 aa17.23■□□□□ 0.35
CAPN1-222ENST00000532285 TENM3Q9P273 2699 aa17.23■□□□□ 0.35
CAPN1-222ENST00000532285 A0A1B0GU03 582 aa17.22■□□□□ 0.35
CAPN1-222ENST00000532285 RPS10-NUDT3A0A1W2PQS6 291 aa17.22■□□□□ 0.35
CAPN1-222ENST00000532285 NXPH3O95157 252 aa17.22■□□□□ 0.35
CAPN1-222ENST00000532285 TNFRSF9Q07011 255 aa17.22■□□□□ 0.35
CAPN1-222ENST00000532285 NOXA1Q86UR1 476 aa17.22■□□□□ 0.35
CAPN1-222ENST00000532285 LRTM2Q8N967 370 aa17.22■□□□□ 0.35
CAPN1-222ENST00000532285 SLC24A4Q8NFF2 622 aa17.22■□□□□ 0.35
CAPN1-222ENST00000532285 OR4X1Q8NH49 305 aa17.22■□□□□ 0.35
CAPN1-222ENST00000532285 RNASEH2CQ8TDP1 164 aaKnown RBP17.22■□□□□ 0.35
CAPN1-222ENST00000532285 SPAG8Q99932 426 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-222ENST00000532285 TRAV14DV4A0A0A6YYC5 116 aa17.21■□□□□ 0.35
CAPN1-222ENST00000532285 IGHV7-4-1A0A0J9YVY3 117 aa17.21■□□□□ 0.35
CAPN1-222ENST00000532285 TSPAN4O14817 238 aa17.21■□□□□ 0.35
CAPN1-222ENST00000532285 CLN5O75503 358 aa17.21■□□□□ 0.35
CAPN1-222ENST00000532285 SCGB2A1O75556 95 aa17.21■□□□□ 0.35
CAPN1-222ENST00000532285 SFT2D2O95562 160 aa17.21■□□□□ 0.35
CAPN1-222ENST00000532285 MLANAQ16655 118 aa17.21■□□□□ 0.35
CAPN1-222ENST00000532285 LINC00322Q6ZN03 302 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-222ENST00000532285 ZNF600Q6ZNG1 722 aa17.21■□□□□ 0.35
CAPN1-222ENST00000532285 TMEM116Q8NCL8 245 aa17.21■□□□□ 0.35
CAPN1-222ENST00000532285 OR1S1Q8NH92 325 aa17.21■□□□□ 0.35
CAPN1-222ENST00000532285 GINS3Q9BRX5 216 aa17.21■□□□□ 0.35
CAPN1-222ENST00000532285 SRD5A3Q9H8P0 318 aa17.21■□□□□ 0.35
CAPN1-222ENST00000532285 CENPXA8MT69 81 aa17.2■□□□□ 0.34
CAPN1-222ENST00000532285 UBE2MP61081 183 aaKnown RBP17.2■□□□□ 0.34
CAPN1-222ENST00000532285 PPP1R1AQ13522 171 aa17.2■□□□□ 0.34
CAPN1-222ENST00000532285 TOMM20LQ6UXN7 152 aa17.2■□□□□ 0.34
CAPN1-222ENST00000532285 SPATA25Q9BR10 227 aa17.2■□□□□ 0.34
CAPN1-222ENST00000532285 WFDC10AQ9H1F0 79 aa17.2■□□□□ 0.34
CAPN1-222ENST00000532285 CHEK1O14757 476 aa17.19■□□□□ 0.34
CAPN1-222ENST00000532285 NDUFB6O95139 128 aa17.19■□□□□ 0.34
CAPN1-222ENST00000532285 SLC25A6P12236 298 aa17.19■□□□□ 0.34
CAPN1-222ENST00000532285 NPY1RP25929 384 aa17.19■□□□□ 0.34
CAPN1-222ENST00000532285 DTD1Q8TEA8 209 aa17.19■□□□□ 0.34
CAPN1-222ENST00000532285 C7orf50Q9BRJ6 194 aaKnown RBP17.19■□□□□ 0.34
CAPN1-222ENST00000532285 RHPN1-AS1Q9BWJ2 59 aa17.19■□□□□ 0.34
CAPN1-222ENST00000532285 RBKSQ9H477 322 aa17.19■□□□□ 0.34
CAPN1-222ENST00000532285 MRPL36Q9P0J6 103 aaKnown RBP17.19■□□□□ 0.34
CAPN1-222ENST00000532285 PUS1Q9Y606 427 aaKnown RBP eCLIP17.19■□□□□ 0.34
CAPN1-222ENST00000532285 U3KQ87 197 aa17.19■□□□□ 0.34
CAPN1-222ENST00000532285 TRAV30A0A087WSZ9 112 aa17.18■□□□□ 0.34
CAPN1-222ENST00000532285 LINC00854A0A1B0GVQ3 168 aa17.18■□□□□ 0.34
CAPN1-222ENST00000532285 RBMY1BA6NDE4 496 aaKnown RBP17.18■□□□□ 0.34
CAPN1-222ENST00000532285 RBMY1EA6NEQ0 496 aaKnown RBP17.18■□□□□ 0.34
CAPN1-222ENST00000532285 IFNA10P01566 189 aa17.18■□□□□ 0.34
CAPN1-222ENST00000532285 RBMY1DP0C7P1 496 aaKnown RBP17.18■□□□□ 0.34
CAPN1-222ENST00000532285 SLC25A4P12235 298 aa17.18■□□□□ 0.34
CAPN1-222ENST00000532285 ETFRF1Q6IPR1 90 aa17.18■□□□□ 0.34
CAPN1-222ENST00000532285 TMEM170AQ8WVE7 144 aa17.18■□□□□ 0.34
CAPN1-222ENST00000532285 TMED3Q9Y3Q3 217 aa17.18■□□□□ 0.34
CAPN1-222ENST00000532285 PITX3O75364 302 aa17.17■□□□□ 0.34
CAPN1-222ENST00000532285 IL7P13232 177 aa17.17■□□□□ 0.34
CAPN1-222ENST00000532285 BMI1P35226 326 aa17.17■□□□□ 0.34
CAPN1-222ENST00000532285 RNF2Q99496 336 aa17.17■□□□□ 0.34
CAPN1-222ENST00000532285 ZFAND3Q9H8U3 227 aa17.17■□□□□ 0.34
CAPN1-222ENST00000532285 NBEAL2Q6ZNJ1 2754 aa17.16■□□□□ 0.34
CAPN1-222ENST00000532285 IGHV3-49A0A0A0MS15 119 aa17.16■□□□□ 0.34
CAPN1-222ENST00000532285 ATP5IP56385 69 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-222ENST00000532285 PRSS54Q6PEW0 395 aa17.16■□□□□ 0.34
CAPN1-222ENST00000532285 OR4C46A6NHA9 309 aa17.15■□□□□ 0.34
CAPN1-222ENST00000532285 IGKV1-17P01599 117 aa17.15■□□□□ 0.34
CAPN1-222ENST00000532285 CD5P06127 495 aa17.15■□□□□ 0.34
CAPN1-222ENST00000532285 OR1S2Q8NGQ3 325 aa17.15■□□□□ 0.34
CAPN1-222ENST00000532285 FAM90A26D6RGX4 464 aa17.14■□□□□ 0.33
CAPN1-222ENST00000532285 RND2P52198 227 aa17.14■□□□□ 0.33
CAPN1-222ENST00000532285 CNPY1Q3B7I2 92 aa17.14■□□□□ 0.33
CAPN1-222ENST00000532285 TIGITQ495A1 244 aa17.14■□□□□ 0.33
CAPN1-222ENST00000532285 FLVCR2Q9UPI3 526 aa17.14■□□□□ 0.33
CAPN1-222ENST00000532285 C9orf170A2RU37 121 aa17.13■□□□□ 0.33
CAPN1-222ENST00000532285 MED6O75586 246 aa17.13■□□□□ 0.33
CAPN1-222ENST00000532285 HOXB5P09067 269 aa17.13■□□□□ 0.33
CAPN1-222ENST00000532285 NPPCP23582 126 aa17.13■□□□□ 0.33
CAPN1-222ENST00000532285 BTCP35070 178 aa17.13■□□□□ 0.33
CAPN1-222ENST00000532285 FAM110AQ9BQ89 295 aa17.13■□□□□ 0.33
CAPN1-222ENST00000532285 VSIRQ9H7M9 311 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms